RNA–Protein interactions for RNA: YDR240C

SNU56, Transcript of Component of U1 snRNP required for mRNA splicing via spliceosome, yeastyeast

Gene SNU56, Length 1,479 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNU56YDR240C YPL068CQ02749 293 aa3.48□□□□□ -1.85
SNU56YDR240C PCL8Q08966 492 aa3.48□□□□□ -1.85
SNU56YDR240C DAL3P32459 195 aa3.47□□□□□ -1.85
SNU56YDR240C EUG1P32474 517 aa3.47□□□□□ -1.85
SNU56YDR240C CDC5P32562 705 aa3.47□□□□□ -1.85
SNU56YDR240C SDH8P38345 138 aa3.47□□□□□ -1.85
SNU56YDR240C SPC97P38863 823 aa3.47□□□□□ -1.85
SNU56YDR240C YIL092WP40497 633 aa3.47□□□□□ -1.85
SNU56YDR240C SCS3P53012 380 aa3.47□□□□□ -1.85
SNU56YDR240C MNT2P53059 558 aa3.47□□□□□ -1.85
SNU56YDR240C SLD3P53135 668 aa3.47□□□□□ -1.85
SNU56YDR240C SPC105P53148 917 aa3.47□□□□□ -1.85
SNU56YDR240C HOL1P53389 586 aa3.47□□□□□ -1.85
SNU56YDR240C YNL058CP53947 316 aa3.47□□□□□ -1.85
SNU56YDR240C RSC9Q03124 581 aa3.47□□□□□ -1.85
SNU56YDR240C YOR378WQ08902 515 aa3.47□□□□□ -1.85
SNU56YDR240C MRN1Q08925 612 aaKnown RBP RIP-Chip data3.47□□□□□ -1.85not detected
SNU56YDR240C YLR111WQ12528 110 aa3.47□□□□□ -1.85
SNU56YDR240C PRP45P28004 379 aaPredicted RBP3.47□□□□□ -1.85
SNU56YDR240C YJU2P28320 278 aaPredicted RBP3.47□□□□□ -1.85
SNU56YDR240C SAE2P46946 345 aa3.47□□□□□ -1.85
SNU56YDR240C AHA1Q12449 350 aaKnown RBP3.47□□□□□ -1.85
SNU56YDR240C BI2P03873 423 aa3.46□□□□□ -1.86
SNU56YDR240C YPK1P12688 680 aaKnown RBP3.46□□□□□ -1.86
SNU56YDR240C COX11P19516 300 aaKnown RBP3.46□□□□□ -1.86
SNU56YDR240C ARG1P22768 420 aa3.46□□□□□ -1.86
SNU56YDR240C URE2P23202 354 aaKnown RBP3.46□□□□□ -1.86
SNU56YDR240C MNT3P40549 630 aa3.46□□□□□ -1.86
SNU56YDR240C HRD3Q05787 833 aa3.46□□□□□ -1.86
SNU56YDR240C PEX15Q08215 383 aa3.46□□□□□ -1.86
SNU56YDR240C GEP3Q08622 556 aa3.46□□□□□ -1.86
SNU56YDR240C CWC2Q12046 339 aaPredicted RBP3.46□□□□□ -1.86
SNU56YDR240C PRS5Q12265 496 aaKnown RBP3.46□□□□□ -1.86
SNU56YDR240C YUR1P26725 428 aa3.45□□□□□ -1.86
SNU56YDR240C PET309P32522 965 aaPredicted RBP3.45□□□□□ -1.86
SNU56YDR240C STL1P39932 569 aa3.45□□□□□ -1.86
SNU56YDR240C LAS21P40367 830 aa3.45□□□□□ -1.86
SNU56YDR240C PCI8P40512 444 aa3.45□□□□□ -1.86
SNU56YDR240C YNL092WP53934 400 aa3.45□□□□□ -1.86
SNU56YDR240C CIR2Q08822 631 aa3.45□□□□□ -1.86
SNU56YDR240C HOS1Q12214 470 aa3.45□□□□□ -1.86
SNU56YDR240C CHO2P05374 869 aaKnown RBP3.44□□□□□ -1.86
SNU56YDR240C HEM12P32347 362 aaPredicted RBP3.44□□□□□ -1.86
SNU56YDR240C YBR071WP38243 211 aa3.44□□□□□ -1.86
SNU56YDR240C JHD1P40034 492 aa3.44□□□□□ -1.86
SNU56YDR240C MAM1P40065 302 aa3.44□□□□□ -1.86
SNU56YDR240C CIR1P42940 261 aa3.44□□□□□ -1.86
SNU56YDR240C TPO3Q06451 622 aa3.44□□□□□ -1.86
SNU56YDR240C CYK3Q07533 885 aa3.44□□□□□ -1.86
SNU56YDR240C PSF3Q12146 194 aa3.44□□□□□ -1.86
SNU56YDR240C CRC1Q12289 327 aa3.44□□□□□ -1.86
SNU56YDR240C CET1O13297 549 aaPredicted RBP3.43□□□□□ -1.86
SNU56YDR240C URA3P03962 267 aa3.43□□□□□ -1.86
SNU56YDR240C EAF5P39995 279 aa3.43□□□□□ -1.86
SNU56YDR240C MAD2P40958 196 aa3.43□□□□□ -1.86
SNU56YDR240C COG2P53271 262 aa3.43□□□□□ -1.86
SNU56YDR240C YNR071CP53757 342 aa3.43□□□□□ -1.86
SNU56YDR240C YPL071CQ02864 156 aa3.43□□□□□ -1.86
SNU56YDR240C RAD33Q04231 177 aa3.43□□□□□ -1.86
SNU56YDR240C TRI1Q05024 226 aa3.43□□□□□ -1.86
SNU56YDR240C KGD2P19262 463 aaPredicted RBP3.42□□□□□ -1.86
SNU56YDR240C PLC1P32383 869 aa3.42□□□□□ -1.86
SNU56YDR240C GDA1P32621 518 aa3.42□□□□□ -1.86
SNU56YDR240C ASK1P35734 292 aa3.42□□□□□ -1.86
SNU56YDR240C YEN1P40028 759 aa3.42□□□□□ -1.86
SNU56YDR240C GSM1P42950 618 aa3.42□□□□□ -1.86
SNU56YDR240C IRC8P47046 822 aa3.42□□□□□ -1.86
SNU56YDR240C COS12P53053 380 aa3.42□□□□□ -1.86
SNU56YDR240C ENT2Q05785 613 aa3.42□□□□□ -1.86
SNU56YDR240C RTK1Q12100 620 aaPredicted RBP3.42□□□□□ -1.86
SNU56YDR240C KAR1P11927 433 aa3.41□□□□□ -1.86
SNU56YDR240C YAP1P19880 650 aaKnown RBP3.41□□□□□ -1.86
SNU56YDR240C GRX4P32642 244 aa3.41□□□□□ -1.86
SNU56YDR240C PAF1P38351 445 aa3.41□□□□□ -1.86
SNU56YDR240C CFD1P40558 293 aa3.41□□□□□ -1.86
SNU56YDR240C IRC7P43623 340 aa3.41□□□□□ -1.86
SNU56YDR240C SCW4P53334 386 aaKnown RBP3.41□□□□□ -1.86
SNU56YDR240C DIN7Q12086 430 aa3.41□□□□□ -1.86
SNU56YDR240C SLX4Q12098 748 aa3.41□□□□□ -1.86
SNU56YDR240C PNO1Q99216 274 aaKnown RBP3.41□□□□□ -1.86
SNU56YDR240C TAF5P38129 798 aa3.41□□□□□ -1.86
SNU56YDR240C FTH1P38310 465 aa3.41□□□□□ -1.86
SNU56YDR240C NOP2P40991 618 aaKnown RBP3.41□□□□□ -1.86
SNU56YDR240C IDS2P46958 469 aa3.41□□□□□ -1.86
SNU56YDR240C PUS4P48567 403 aaKnown RBP3.41□□□□□ -1.86
SNU56YDR240C MRPL1Q04599 285 aa3.41□□□□□ -1.86
SNU56YDR240C LCB4Q12246 624 aa3.41□□□□□ -1.86
SNU56YDR240C TMA17Q12513 150 aa3.41□□□□□ -1.86
SNU56YDR240C YPR089WO13585 888 aa3.4□□□□□ -1.87
SNU56YDR240C YMR085WP0CF18 432 aa3.4□□□□□ -1.87
SNU56YDR240C YCR061WP25639 631 aa3.4□□□□□ -1.87
SNU56YDR240C KES1P35844 434 aaKnown RBP3.4□□□□□ -1.87
SNU56YDR240C LNP1P38878 278 aa3.4□□□□□ -1.87
SNU56YDR240C STB2P46679 850 aa3.4□□□□□ -1.87
SNU56YDR240C COP1P53622 1201 aaKnown RBP3.4□□□□□ -1.87
SNU56YDR240C COG6P53959 839 aa3.4□□□□□ -1.87
SNU56YDR240C ECM38Q05902 660 aaPredicted RBP3.4□□□□□ -1.87
SNU56YDR240C AMD2P22580 549 aa3.39□□□□□ -1.87
SNU56YDR240C MAK32P23060 363 aa3.39□□□□□ -1.87
SNU56YDR240C COQ3P27680 312 aa3.39□□□□□ -1.87
Retrieved 100 of 5,963 RNA–protein pairs in 13.8 ms