RNA–Protein interactions for RNA: YDR227W

SIR4, Transcript of SIR protein involved in assembly of silent chromatin domains, yeastyeast

Gene SIR4, Length 4,077 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SIR4YDR227W SEC15P22224 910 aa2.25□□□□□ -2.05
SIR4YDR227W COT1P32798 439 aa2.25□□□□□ -2.05
SIR4YDR227W PTK1P36002 662 aaPredicted RBP2.25□□□□□ -2.05
SIR4YDR227W SEA4P38164 1038 aa2.25□□□□□ -2.05
SIR4YDR227W GPP2P40106 250 aaKnown RBP2.25□□□□□ -2.05
SIR4YDR227W EMC2P47133 292 aaKnown RBP2.25□□□□□ -2.05
SIR4YDR227W ALT2P52892 507 aa2.25□□□□□ -2.05
SIR4YDR227W NPY1P53164 384 aa2.25□□□□□ -2.05
SIR4YDR227W CGR1P53188 120 aa2.25□□□□□ -2.05
SIR4YDR227W RCM1P53972 490 aa2.25□□□□□ -2.05
SIR4YDR227W YDR514CQ04408 483 aa2.25□□□□□ -2.05
SIR4YDR227W VBA4Q04602 768 aaKnown RBP2.25□□□□□ -2.05
SIR4YDR227W FAR10Q06001 478 aa2.25□□□□□ -2.05
SIR4YDR227W CWC2Q12046 339 aaPredicted RBP2.25□□□□□ -2.05
SIR4YDR227W GAL4P04386 881 aa2.25□□□□□ -2.05
SIR4YDR227W MCM1P11746 286 aa2.25□□□□□ -2.05
SIR4YDR227W SEC63P14906 663 aa2.25□□□□□ -2.05
SIR4YDR227W PRR1P28708 518 aa2.25□□□□□ -2.05
SIR4YDR227W EFT1P32324 842 aaKnown RBP2.25□□□□□ -2.05
SIR4YDR227W RPN2P32565 945 aaKnown RBP2.25□□□□□ -2.05
SIR4YDR227W LST4P34239 828 aa2.25□□□□□ -2.05
SIR4YDR227W SET3P36124 751 aa2.25□□□□□ -2.05
SIR4YDR227W RFS1P38234 210 aaKnown RBP2.25□□□□□ -2.05
SIR4YDR227W OAF1P39720 1047 aaPredicted RBP2.25□□□□□ -2.05
SIR4YDR227W HMF1P40037 129 aaKnown RBP2.25□□□□□ -2.05
SIR4YDR227W SCS2P40075 244 aaKnown RBP2.25□□□□□ -2.05
SIR4YDR227W QDR2P40474 542 aa2.25□□□□□ -2.05
SIR4YDR227W YFR018CP43599 363 aa2.25□□□□□ -2.05
SIR4YDR227W AIM23P47015 356 aa2.25□□□□□ -2.05
SIR4YDR227W HFM1P51979 1187 aa2.25□□□□□ -2.05
SIR4YDR227W RRN11Q04712 507 aa2.25□□□□□ -2.05
SIR4YDR227W CTF3Q12748 733 aa2.25□□□□□ -2.05
SIR4YDR227W Q0142Q9ZZW4 58 aa2.25□□□□□ -2.05
SIR4YDR227W PDC1P06169 563 aaKnown RBP2.25□□□□□ -2.05
SIR4YDR227W PRB1P09232 635 aa2.25□□□□□ -2.05
SIR4YDR227W PRP28P23394 588 aa2.25□□□□□ -2.05
SIR4YDR227W MBR1P23493 339 aa2.25□□□□□ -2.05
SIR4YDR227W SWI4P25302 1093 aaKnown RBP2.25□□□□□ -2.05
SIR4YDR227W YCL049CP25577 312 aa2.25□□□□□ -2.05
SIR4YDR227W DGR2P32330 852 aa2.25□□□□□ -2.05
SIR4YDR227W YHR033WP38690 423 aa2.25□□□□□ -2.05
SIR4YDR227W PIK1P39104 1066 aa2.25□□□□□ -2.05
SIR4YDR227W ALG2P43636 503 aa2.25□□□□□ -2.05
SIR4YDR227W SGF73P53165 657 aa2.25□□□□□ -2.05
SIR4YDR227W YDR239CQ03780 787 aa2.25□□□□□ -2.05
SIR4YDR227W ATG38Q05789 226 aaKnown RBP2.25□□□□□ -2.05
SIR4YDR227W PSR2Q07949 397 aa2.25□□□□□ -2.05
SIR4YDR227W ARP7Q12406 477 aa2.25□□□□□ -2.05
SIR4YDR227W PRC1P00729 532 aa2.24□□□□□ -2.05
SIR4YDR227W RPP0P05317 312 aaKnown RBP2.24□□□□□ -2.05
SIR4YDR227W YUR1P26725 428 aa2.24□□□□□ -2.05
SIR4YDR227W XRS2P33301 854 aa2.24□□□□□ -2.05
SIR4YDR227W DTR1P38125 572 aa2.24□□□□□ -2.05
SIR4YDR227W SRO77P38163 1010 aa2.24□□□□□ -2.05
SIR4YDR227W BCD1P38772 366 aa2.24□□□□□ -2.05
SIR4YDR227W AIP1P46680 615 aaKnown RBP2.24□□□□□ -2.05
SIR4YDR227W PAN2P53010 1115 aaPredicted RBP2.24□□□□□ -2.05
SIR4YDR227W ADE16P54113 591 aaKnown RBP2.24□□□□□ -2.05
SIR4YDR227W RRN5Q02983 363 aa2.24□□□□□ -2.05
SIR4YDR227W PML1Q07930 204 aaPredicted RBP2.24□□□□□ -2.05
SIR4YDR227W PDH1Q12428 516 aaKnown RBP2.24□□□□□ -2.05
SIR4YDR227W YDR524C-BQ3E6R4 66 aa2.24□□□□□ -2.05
SIR4YDR227W YBR126W-AQ8TGU7 68 aa2.24□□□□□ -2.05
SIR4YDR227W ARG3P05150 338 aa2.24□□□□□ -2.05
SIR4YDR227W DPH5P32469 300 aaPredicted RBP2.24□□□□□ -2.05
SIR4YDR227W YBR225WP38321 900 aa2.24□□□□□ -2.05
SIR4YDR227W STB5P38699 743 aa2.24□□□□□ -2.05
SIR4YDR227W YHR054CP38780 354 aa2.24□□□□□ -2.05
SIR4YDR227W YMR124WP39523 943 aaKnown RBP2.24□□□□□ -2.05
SIR4YDR227W YJR061WP40355 935 aa2.24□□□□□ -2.05
SIR4YDR227W MAD3P47074 515 aa2.24□□□□□ -2.05
SIR4YDR227W ABM1P47146 123 aa2.24□□□□□ -2.05
SIR4YDR227W DSD1P53095 428 aa2.24□□□□□ -2.05
SIR4YDR227W YGL140CP53120 1219 aa2.24□□□□□ -2.05
SIR4YDR227W MRPL13Q02204 264 aa2.24□□□□□ -2.05
SIR4YDR227W YSH1Q06224 779 aaPredicted RBP2.24□□□□□ -2.05
SIR4YDR227W HBN1Q96VH4 193 aa2.24□□□□□ -2.05
SIR4YDR227W RPP1AP05318 106 aaPredicted RBP2.24□□□□□ -2.05
SIR4YDR227W TPK2P06245 380 aa2.24□□□□□ -2.05
SIR4YDR227W PHO3P24031 467 aa2.24□□□□□ -2.05
SIR4YDR227W CMK1P27466 446 aaKnown RBP2.24□□□□□ -2.05
SIR4YDR227W PAP1P29468 568 aaKnown RBP2.24□□□□□ -2.05
SIR4YDR227W BIT2P38346 545 aa2.24□□□□□ -2.05
SIR4YDR227W EAF5P39995 279 aa2.24□□□□□ -2.05
SIR4YDR227W DPH1P40487 425 aaKnown RBP2.24□□□□□ -2.05
SIR4YDR227W QRI7P43122 407 aa2.24□□□□□ -2.05
SIR4YDR227W APL6P46682 809 aa2.24□□□□□ -2.05
SIR4YDR227W HST3P53687 447 aa2.24□□□□□ -2.05
SIR4YDR227W RSF1Q05043 376 aa2.24□□□□□ -2.05
SIR4YDR227W SGO1Q08490 590 aa2.24□□□□□ -2.05
SIR4YDR227W GLE1Q12315 538 aa2.24□□□□□ -2.05
SIR4YDR227W RRD2Q12461 358 aa2.24□□□□□ -2.05
SIR4YDR227W AFI1Q99222 893 aa2.24□□□□□ -2.05
SIR4YDR227W HIS5P07172 385 aa2.23□□□□□ -2.05
SIR4YDR227W CAR2P07991 424 aaKnown RBP2.23□□□□□ -2.05
SIR4YDR227W CDC16P09798 840 aa2.23□□□□□ -2.05
SIR4YDR227W PMS1P14242 873 aa2.23□□□□□ -2.05
SIR4YDR227W RSC6P25632 483 aa2.23□□□□□ -2.05
SIR4YDR227W ERV1P27882 189 aa2.23□□□□□ -2.05
SIR4YDR227W YKL100CP34248 587 aa2.23□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 33.6 ms