RNA–Protein interactions for RNA: YDR110W

FOB1, Transcript of Nucleolar protein that binds the rDNA replication fork barrier site, yeastyeast

Gene FOB1, Length 1,701 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
FOB1YDR110W BRE5P53741 515 aaKnown RBP5.75□□□□□ -1.49
FOB1YDR110W VPS75P53853 264 aa5.75□□□□□ -1.49
FOB1YDR110W CIR2Q08822 631 aa5.75□□□□□ -1.49
FOB1YDR110W YVC1Q12324 675 aa5.75□□□□□ -1.49
FOB1YDR110W GPM3Q12326 303 aa5.75□□□□□ -1.49
FOB1YDR110W GIS3Q12418 502 aa5.75□□□□□ -1.49
FOB1YDR110W PFK27Q12471 397 aaPredicted RBP5.75□□□□□ -1.49
FOB1YDR110W KCS1Q12494 1050 aa5.75□□□□□ -1.49
FOB1YDR110W PDR10P51533 1564 aa5.75□□□□□ -1.49
FOB1YDR110W CDC19P00549 500 aaKnown RBP5.74□□□□□ -1.49
FOB1YDR110W ADE3P07245 946 aaKnown RBP5.74□□□□□ -1.49
FOB1YDR110W UNG1P12887 359 aa5.74□□□□□ -1.49
FOB1YDR110W PMA2P19657 947 aa5.74□□□□□ -1.49
FOB1YDR110W HCA4P20448 770 aaKnown RBP5.74□□□□□ -1.49
FOB1YDR110W MSP1P28737 362 aa5.74□□□□□ -1.49
FOB1YDR110W NGG1P32494 702 aa5.74□□□□□ -1.49
FOB1YDR110W SRP101P32916 621 aa5.74□□□□□ -1.49
FOB1YDR110W APE3P37302 537 aaKnown RBP5.74□□□□□ -1.49
FOB1YDR110W YBR138CP38277 524 aa5.74□□□□□ -1.49
FOB1YDR110W YHR202WP38887 602 aa5.74□□□□□ -1.49
FOB1YDR110W YGL176CP46945 554 aa5.74□□□□□ -1.49
FOB1YDR110W YGR067CP53243 804 aa5.74□□□□□ -1.49
FOB1YDR110W PDR16P53860 351 aaKnown RBP5.74□□□□□ -1.49
FOB1YDR110W HER1Q12276 1246 aa5.74□□□□□ -1.49
FOB1YDR110W RPS21BQ3E754 87 aaKnown RBP5.74□□□□□ -1.49
FOB1YDR110W DOP1Q03921 1698 aa5.74□□□□□ -1.49
FOB1YDR110W COS111P38308 924 aa5.74□□□□□ -1.49
FOB1YDR110W PPE1P38796 400 aa5.74□□□□□ -1.49
FOB1YDR110W MTW1P39731 289 aa5.74□□□□□ -1.49
FOB1YDR110W GYP8P43570 497 aa5.74□□□□□ -1.49
FOB1YDR110W CTF18P49956 741 aa5.74□□□□□ -1.49
FOB1YDR110W DUO1P53168 247 aaKnown RBP5.74□□□□□ -1.49
FOB1YDR110W CUL3P53202 744 aa5.74□□□□□ -1.49
FOB1YDR110W RET3P53600 189 aa5.74□□□□□ -1.49
FOB1YDR110W MNT4P53745 580 aa5.74□□□□□ -1.49
FOB1YDR110W RPT6Q01939 405 aaKnown RBP5.74□□□□□ -1.49
FOB1YDR110W SMA1Q02651 245 aa5.74□□□□□ -1.49
FOB1YDR110W RPM2Q02773 1202 aa5.74□□□□□ -1.49
FOB1YDR110W ECM22Q05958 814 aaPredicted RBP5.74□□□□□ -1.49
FOB1YDR110W GET3Q12154 354 aaKnown RBP5.74□□□□□ -1.49
FOB1YDR110W BUD3P25558 1636 aa5.74□□□□□ -1.49
FOB1YDR110W DAP2P18962 818 aa5.73□□□□□ -1.49
FOB1YDR110W AFT1P22149 690 aa5.73□□□□□ -1.49
FOB1YDR110W TRK2P28584 889 aa5.73□□□□□ -1.49
FOB1YDR110W HXT4P32467 576 aa5.73□□□□□ -1.49
FOB1YDR110W PIN4P34217 668 aaKnown RBP RIP-Chip data5.73□□□□□ -1.49not detected
FOB1YDR110W IRS4P36115 615 aaKnown RBP5.73□□□□□ -1.49
FOB1YDR110W FAT1P38225 669 aa5.73□□□□□ -1.49
FOB1YDR110W ALG14P38242 237 aa5.73□□□□□ -1.49
FOB1YDR110W SIP3P38717 1229 aa5.73□□□□□ -1.49
FOB1YDR110W PEX28P38848 579 aa5.73□□□□□ -1.49
FOB1YDR110W UTP9P38882 575 aaKnown RBP5.73□□□□□ -1.49
FOB1YDR110W YIL092WP40497 633 aa5.73□□□□□ -1.49
FOB1YDR110W UBP15P50101 1230 aa5.73□□□□□ -1.49
FOB1YDR110W RPA14P50106 137 aa5.73□□□□□ -1.49
FOB1YDR110W CGR1P53188 120 aa5.73□□□□□ -1.49
FOB1YDR110W OGG1P53397 376 aaPredicted RBP5.73□□□□□ -1.49
FOB1YDR110W SIW14P53965 281 aa5.73□□□□□ -1.49
FOB1YDR110W MUB1Q03162 620 aa5.73□□□□□ -1.49
FOB1YDR110W TIF35Q04067 274 aaKnown RBP5.73□□□□□ -1.49
FOB1YDR110W AGE1Q04412 482 aa5.73□□□□□ -1.49
FOB1YDR110W NNT1Q05874 261 aa5.73□□□□□ -1.49
FOB1YDR110W FMP45Q07651 309 aa5.73□□□□□ -1.49
FOB1YDR110W SLK19Q08581 821 aaKnown RBP5.73□□□□□ -1.49
FOB1YDR110W GRX6Q12438 231 aa5.73□□□□□ -1.49
FOB1YDR110W GEA1P47102 1408 aaPredicted RBP5.73□□□□□ -1.49
FOB1YDR110W TRM3Q07527 1436 aa5.73□□□□□ -1.49
FOB1YDR110W THR4P16120 514 aaKnown RBP5.72□□□□□ -1.49
FOB1YDR110W RPI1P23250 407 aaKnown RBP5.72□□□□□ -1.49
FOB1YDR110W GIP4P39732 760 aa5.72□□□□□ -1.49
FOB1YDR110W MRX6P48564 524 aa5.72□□□□□ -1.49
FOB1YDR110W HSH155P49955 971 aaKnown RBP5.72□□□□□ -1.49
FOB1YDR110W GPD1Q00055 391 aaKnown RBP5.72□□□□□ -1.49
FOB1YDR110W ROD1Q02805 837 aa5.72□□□□□ -1.49
FOB1YDR110W MRPS17Q03246 237 aaPredicted RBP5.72□□□□□ -1.49
FOB1YDR110W URC2Q04411 772 aa5.72□□□□□ -1.49
FOB1YDR110W HFI1Q12060 488 aa5.72□□□□□ -1.49
FOB1YDR110W ISN1Q99312 450 aa5.72□□□□□ -1.49
FOB1YDR110W YML133CQ03099 1374 aa5.72□□□□□ -1.49
FOB1YDR110W YLL066CQ99208 1374 aa5.72□□□□□ -1.49
FOB1YDR110W SUI3P09064 285 aaKnown RBP5.71□□□□□ -1.49
FOB1YDR110W HEM1P09950 548 aaPredicted RBP5.71□□□□□ -1.49
FOB1YDR110W RPP1BP10622 106 aaKnown RBP5.71□□□□□ -1.49
FOB1YDR110W ARO3P14843 370 aaKnown RBP5.71□□□□□ -1.49
FOB1YDR110W FAR1P21268 830 aa5.71□□□□□ -1.49
FOB1YDR110W DAL81P21657 970 aa5.71□□□□□ -1.49
FOB1YDR110W PHO3P24031 467 aa5.71□□□□□ -1.49
FOB1YDR110W HOG1P32485 435 aa5.71□□□□□ -1.49
FOB1YDR110W SRB2P34162 210 aa5.71□□□□□ -1.49
FOB1YDR110W DAD2P36162 133 aa5.71□□□□□ -1.49
FOB1YDR110W YHL017WP38745 532 aa5.71□□□□□ -1.49
FOB1YDR110W PIK1P39104 1066 aa5.71□□□□□ -1.49
FOB1YDR110W BNA2P47125 453 aa5.71□□□□□ -1.49
FOB1YDR110W RSM26P47141 266 aa5.71□□□□□ -1.49
FOB1YDR110W ALT1P52893 592 aa5.71□□□□□ -1.49
FOB1YDR110W SFB2P53953 876 aa5.71□□□□□ -1.49
FOB1YDR110W YHM2Q04013 314 aa5.71□□□□□ -1.49
FOB1YDR110W SSL1Q04673 461 aaPredicted RBP5.71□□□□□ -1.49
FOB1YDR110W MSC3Q05812 728 aa5.71□□□□□ -1.49
FOB1YDR110W RSC3Q06639 885 aa5.71□□□□□ -1.49
Retrieved 100 of 5,963 RNA–protein pairs in 10.4 ms