RNA–Protein interactions for RNA: YAL040C

CLN3, Transcript of G1 cyclin involved in cell cycle progression, yeastyeast

Gene CLN3, Length 1,743 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CLN3YAL040C SAP185P40856 1058 aa2.49□□□□□ -2.01
CLN3YAL040C DUG1P43616 481 aaKnown RBP2.49□□□□□ -2.01
CLN3YAL040C FMS1P50264 508 aa2.49□□□□□ -2.01
CLN3YAL040C UBA2P52488 636 aa2.49□□□□□ -2.01
CLN3YAL040C BNI5P53890 448 aaKnown RBP2.49□□□□□ -2.01
CLN3YAL040C YML131WQ03102 365 aa2.49□□□□□ -2.01
CLN3YAL040C MLC2Q06580 163 aa2.49□□□□□ -2.01
CLN3YAL040C YDL057WQ07379 328 aa2.49□□□□□ -2.01
CLN3YAL040C SLK19Q08581 821 aaKnown RBP2.49□□□□□ -2.01
CLN3YAL040C YPL066WQ12194 479 aa2.49□□□□□ -2.01
CLN3YAL040C TIP41Q12199 356 aa2.49□□□□□ -2.01
CLN3YAL040C ISY1P21374 235 aaPredicted RBP2.48□□□□□ -2.01
CLN3YAL040C RRP43P25359 394 aaPredicted RBP2.48□□□□□ -2.01
CLN3YAL040C BMH1P29311 267 aaKnown RBP2.48□□□□□ -2.01
CLN3YAL040C SEC65P29478 273 aa2.48□□□□□ -2.01
CLN3YAL040C RPC82P32349 654 aa2.48□□□□□ -2.01
CLN3YAL040C HBS1P32769 611 aaKnown RBP2.48□□□□□ -2.01
CLN3YAL040C TFC4P33339 1025 aa2.48□□□□□ -2.01
CLN3YAL040C NIC96P34077 839 aa2.48□□□□□ -2.01
CLN3YAL040C PIN4P34217 668 aaKnown RBP RIP-Chip data2.48□□□□□ -2.01not detected
CLN3YAL040C RPC25P35718 212 aa2.48□□□□□ -2.01
CLN3YAL040C YET1P35723 206 aa2.48□□□□□ -2.01
CLN3YAL040C PIH1P38768 344 aa2.48□□□□□ -2.01
CLN3YAL040C CCT3P39077 534 aaKnown RBP2.48□□□□□ -2.01
CLN3YAL040C SAH1P39954 449 aaKnown RBP2.48□□□□□ -2.01
CLN3YAL040C AIP1P46680 615 aaKnown RBP2.48□□□□□ -2.01
CLN3YAL040C DIP5P53388 608 aa2.48□□□□□ -2.01
CLN3YAL040C PGA2P53903 129 aa2.48□□□□□ -2.01
CLN3YAL040C YML037CQ03703 340 aa2.48□□□□□ -2.01
CLN3YAL040C MTQ2Q03920 221 aaPredicted RBP2.48□□□□□ -2.01
CLN3YAL040C DUS3Q06053 668 aaKnown RBP2.48□□□□□ -2.01
CLN3YAL040C WHI4Q07655 649 aaKnown RBP2.48□□□□□ -2.01
CLN3YAL040C ETT1Q08421 412 aaKnown RBP2.48□□□□□ -2.01
CLN3YAL040C APL4Q12028 832 aa2.48□□□□□ -2.01
CLN3YAL040C NPC2Q12408 173 aa2.48□□□□□ -2.01
CLN3YAL040C CEX1Q12453 761 aa2.48□□□□□ -2.01
CLN3YAL040C HBN1Q96VH4 193 aa2.48□□□□□ -2.01
CLN3YAL040C INH1P01097 85 aa2.48□□□□□ -2.01
CLN3YAL040C RAD18P10862 487 aa2.48□□□□□ -2.01
CLN3YAL040C AEP2P22136 580 aa2.48□□□□□ -2.01
CLN3YAL040C TFC3P34111 1160 aa2.48□□□□□ -2.01
CLN3YAL040C YKL151CP36059 337 aa2.48□□□□□ -2.01
CLN3YAL040C ADE17P38009 592 aaKnown RBP2.48□□□□□ -2.01
CLN3YAL040C PCH2P38126 564 aa2.48□□□□□ -2.01
CLN3YAL040C GIC1P38785 314 aa2.48□□□□□ -2.01
CLN3YAL040C NIT2P47016 307 aa2.48□□□□□ -2.01
CLN3YAL040C LSB1P53281 241 aa2.48□□□□□ -2.01
CLN3YAL040C CBK1P53894 756 aa2.48□□□□□ -2.01
CLN3YAL040C ORC4P54791 529 aa2.48□□□□□ -2.01
CLN3YAL040C SNP1Q00916 300 aaPredicted RBP2.48□□□□□ -2.01
CLN3YAL040C MEH1Q02205 184 aa2.48□□□□□ -2.01
CLN3YAL040C EBS1Q03466 884 aaKnown RBP2.48□□□□□ -2.01
CLN3YAL040C BUL2Q03758 920 aaKnown RBP2.48□□□□□ -2.01
CLN3YAL040C SXM1Q04175 944 aaKnown RBP2.48□□□□□ -2.01
CLN3YAL040C GFD1Q04839 188 aaKnown RBP2.48□□□□□ -2.01
CLN3YAL040C YLR225CQ05948 407 aaKnown RBP2.48□□□□□ -2.01
CLN3YAL040C YLH47Q06493 454 aa2.48□□□□□ -2.01
CLN3YAL040C TSR2Q06672 205 aaKnown RBP2.48□□□□□ -2.01
CLN3YAL040C REH1Q06709 432 aa2.48□□□□□ -2.01
CLN3YAL040C OPY2Q06810 360 aa2.48□□□□□ -2.01
CLN3YAL040C GUP2Q08929 609 aa2.48□□□□□ -2.01
CLN3YAL040C NEW1Q08972 1196 aaKnown RBP2.48□□□□□ -2.01
CLN3YAL040C CWC2Q12046 339 aaPredicted RBP2.48□□□□□ -2.01
CLN3YAL040C YOL087CQ99247 1116 aa2.48□□□□□ -2.01
CLN3YAL040C MOT1P32333 1867 aa2.47□□□□□ -2.01
CLN3YAL040C RPS9BP05755 195 aaKnown RBP2.47□□□□□ -2.01
CLN3YAL040C CDC37P06101 506 aaKnown RBP2.47□□□□□ -2.01
CLN3YAL040C TOM70P07213 617 aaKnown RBP2.47□□□□□ -2.01
CLN3YAL040C SRD1P09007 221 aa2.47□□□□□ -2.01
CLN3YAL040C GFD2P25370 566 aaKnown RBP2.47□□□□□ -2.01
CLN3YAL040C VBA3P25594 458 aa2.47□□□□□ -2.01
CLN3YAL040C EFT1P32324 842 aaKnown RBP2.47□□□□□ -2.01
CLN3YAL040C SWI3P32591 825 aa2.47□□□□□ -2.01
CLN3YAL040C TGL1P34163 548 aa2.47□□□□□ -2.01
CLN3YAL040C UBP11P36026 717 aa2.47□□□□□ -2.01
CLN3YAL040C PPS1P38148 807 aa2.47□□□□□ -2.01
CLN3YAL040C MOH1P38191 138 aa2.47□□□□□ -2.01
CLN3YAL040C YHL041WP38730 149 aa2.47□□□□□ -2.01
CLN3YAL040C SPT8P38915 602 aa2.47□□□□□ -2.01
CLN3YAL040C DSS1P39112 969 aa2.47□□□□□ -2.01
CLN3YAL040C ESL1P40456 1118 aa2.47□□□□□ -2.01
CLN3YAL040C MNT3P40549 630 aa2.47□□□□□ -2.01
CLN3YAL040C URM1P40554 99 aaPredicted RBP2.47□□□□□ -2.01
CLN3YAL040C THI6P41835 540 aa2.47□□□□□ -2.01
CLN3YAL040C UBP6P43593 499 aaKnown RBP2.47□□□□□ -2.01
CLN3YAL040C NCS6P53088 359 aa2.47□□□□□ -2.01
CLN3YAL040C CWC22P53333 577 aaKnown RBP2.47□□□□□ -2.01
CLN3YAL040C SRP1Q02821 542 aaKnown RBP2.47□□□□□ -2.01
CLN3YAL040C SPC19Q03954 165 aa2.47□□□□□ -2.01
CLN3YAL040C HCR1Q05775 265 aaKnown RBP2.47□□□□□ -2.01
CLN3YAL040C TLG2Q08144 397 aa2.47□□□□□ -2.01
CLN3YAL040C YAP7Q08182 245 aa2.47□□□□□ -2.01
CLN3YAL040C CLF1Q12309 687 aaPredicted RBP2.47□□□□□ -2.01
CLN3YAL040C ARP6Q12509 438 aa2.47□□□□□ -2.01
CLN3YAL040C SMC6Q12749 1114 aa2.47□□□□□ -2.01
CLN3YAL040C LAA1P39526 2014 aa2.46□□□□□ -2.02
CLN3YAL040C RPL22AP05749 121 aaKnown RBP2.46□□□□□ -2.02
CLN3YAL040C TOP3P13099 656 aa2.46□□□□□ -2.02
CLN3YAL040C PHO13P19881 312 aa2.46□□□□□ -2.02
CLN3YAL040C DAL7P21826 554 aa2.46□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 50.9 ms