RNA–Protein interactions for RNA: ENST00000494674.1

PRPF4B-209, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 5

Gene PRPF4B, Length 1,727 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-209ENST00000494674 ATP2B4P23634 1241 aa12.45□□□□□ -0.42
PRPF4B-209ENST00000494674 CDC27P30260 824 aa12.45□□□□□ -0.42
PRPF4B-209ENST00000494674 EVX2Q03828 476 aa12.45□□□□□ -0.42
PRPF4B-209ENST00000494674 NTRK3Q16288 839 aa12.45□□□□□ -0.42
PRPF4B-209ENST00000494674 CSPP1Q1MSJ5 1256 aa12.45□□□□□ -0.42
PRPF4B-209ENST00000494674 IFFO2Q5TF58 517 aa12.45□□□□□ -0.42
PRPF4B-209ENST00000494674 ZNF804AQ7Z570 1209 aa12.45□□□□□ -0.42
PRPF4B-209ENST00000494674 NLGN1Q8N2Q7 840 aa12.45□□□□□ -0.42
PRPF4B-209ENST00000494674 TBC1D16Q8TBP0 767 aa12.45□□□□□ -0.42
PRPF4B-209ENST00000494674 WDR66Q8TBY9 1149 aa12.45□□□□□ -0.42
PRPF4B-209ENST00000494674 MTA3Q9BTC8 594 aa12.45□□□□□ -0.42
PRPF4B-209ENST00000494674 ZSCAN16Q9H4T2 348 aaPredicted RBP12.45□□□□□ -0.42
PRPF4B-209ENST00000494674 AATFQ9NY61 560 aaKnown RBP eCLIP12.45□□□□□ -0.42
PRPF4B-209ENST00000494674 POLLQ9UGP5 575 aa12.45□□□□□ -0.42
PRPF4B-209ENST00000494674 IFIT3O14879 490 aaKnown RBP12.44□□□□□ -0.42
PRPF4B-209ENST00000494674 RXRAP19793 462 aa12.44□□□□□ -0.42
PRPF4B-209ENST00000494674 FOSBP53539 338 aa12.44□□□□□ -0.42
PRPF4B-209ENST00000494674 SPTY2D1Q68D10 685 aaPredicted RBP12.44□□□□□ -0.42
PRPF4B-209ENST00000494674 CTR9Q6PD62 1173 aa12.44□□□□□ -0.42
PRPF4B-209ENST00000494674 LRSAM1Q6UWE0 723 aa12.44□□□□□ -0.42
PRPF4B-209ENST00000494674 LEO1Q8WVC0 666 aaPredicted RBP12.44□□□□□ -0.42
PRPF4B-209ENST00000494674 RNF41Q9H4P4 317 aaPredicted RBP12.44□□□□□ -0.42
PRPF4B-209ENST00000494674 CD209Q9NNX6 404 aa12.44□□□□□ -0.42
PRPF4B-209ENST00000494674 DCP1AQ9NPI6 582 aaPredicted RBP12.44□□□□□ -0.42
PRPF4B-209ENST00000494674 TFIP11Q9UBB9 837 aaKnown RBP12.44□□□□□ -0.42
PRPF4B-209ENST00000494674 ORC3Q9UBD5 711 aaPredicted RBP12.44□□□□□ -0.42
PRPF4B-209ENST00000494674 GGA1Q9UJY5 639 aa12.44□□□□□ -0.42
PRPF4B-209ENST00000494674 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.44□□□□□ -0.42
PRPF4B-209ENST00000494674 MINDY4BA8MYZ0 360 aa12.43□□□□□ -0.42
PRPF4B-209ENST00000494674 ZBTB43O43298 467 aa12.43□□□□□ -0.42
PRPF4B-209ENST00000494674 SRGNP10124 158 aa12.43□□□□□ -0.42
PRPF4B-209ENST00000494674 METAP2P50579 478 aaKnown RBP eCLIP12.43□□□□□ -0.42
PRPF4B-209ENST00000494674 SEC23AQ15436 765 aa12.43□□□□□ -0.42
PRPF4B-209ENST00000494674 FLAD1Q8NFF5 587 aa12.43□□□□□ -0.42
PRPF4B-209ENST00000494674 SCAND2PQ9GZW5 306 aaPredicted RBP12.43□□□□□ -0.42
PRPF4B-209ENST00000494674 MKRN1Q9UHC7 482 aaKnown RBP12.43□□□□□ -0.42
PRPF4B-209ENST00000494674 PPEF1O14829 653 aaPredicted RBP12.42□□□□□ -0.42
PRPF4B-209ENST00000494674 RANBP6O60518 1105 aaKnown RBP12.42□□□□□ -0.42
PRPF4B-209ENST00000494674 LDHBP07195 334 aaKnown RBP12.42□□□□□ -0.42
PRPF4B-209ENST00000494674 GUCY1B3Q02153 619 aa12.42□□□□□ -0.42
PRPF4B-209ENST00000494674 RRP12Q5JTH9 1297 aaKnown RBP12.42□□□□□ -0.42
PRPF4B-209ENST00000494674 TMC4Q7Z404 712 aa12.42□□□□□ -0.42
PRPF4B-209ENST00000494674 MICU3Q86XE3 530 aa12.42□□□□□ -0.42
PRPF4B-209ENST00000494674 DZIP1Q86YF9 867 aaKnown RBP12.42□□□□□ -0.42
PRPF4B-209ENST00000494674 SP8Q8IXZ3 490 aa12.42□□□□□ -0.42
PRPF4B-209ENST00000494674 STK11IPQ8N1F8 1099 aa12.42□□□□□ -0.42
PRPF4B-209ENST00000494674 RGS22Q8NE09 1264 aa12.42□□□□□ -0.42
PRPF4B-209ENST00000494674 FBXO18Q8NFZ0 1043 aa12.42□□□□□ -0.42
PRPF4B-209ENST00000494674 SYAP1Q96A49 352 aaPredicted RBP12.42□□□□□ -0.42
PRPF4B-209ENST00000494674 ZKSCAN3Q9BRR0 538 aa12.42□□□□□ -0.42
PRPF4B-209ENST00000494674 MYL10Q9BUA6 226 aa12.42□□□□□ -0.42
PRPF4B-209ENST00000494674 CRNKL1Q9BZJ0 848 aaKnown RBP12.42□□□□□ -0.42
PRPF4B-209ENST00000494674 RBSNQ9H1K0 784 aa12.42□□□□□ -0.42
PRPF4B-209ENST00000494674 ATP8A2Q9NTI2 1148 aa12.42□□□□□ -0.42
PRPF4B-209ENST00000494674 MYH1P12882 1939 aa12.42□□□□□ -0.42
PRPF4B-209ENST00000494674 USP17L12C9JPN9 530 aa12.42□□□□□ -0.42
PRPF4B-209ENST00000494674 USP17L21D6R901 530 aa12.42□□□□□ -0.42
PRPF4B-209ENST00000494674 CPLX1O14810 134 aa12.42□□□□□ -0.42
PRPF4B-209ENST00000494674 MMP10P09238 476 aa12.42□□□□□ -0.42
PRPF4B-209ENST00000494674 PCP11498 1178 aaKnown RBP12.42□□□□□ -0.42
PRPF4B-209ENST00000494674 DIXDC1Q155Q3 683 aa12.42□□□□□ -0.42
PRPF4B-209ENST00000494674 SBK1Q52WX2 424 aa12.42□□□□□ -0.42
PRPF4B-209ENST00000494674 CCDC183Q5T5S1 534 aa12.42□□□□□ -0.42
PRPF4B-209ENST00000494674 OTUD7BQ6GQQ9 843 aa12.42□□□□□ -0.42
PRPF4B-209ENST00000494674 POTEAQ6S8J7 498 aa12.42□□□□□ -0.42
PRPF4B-209ENST00000494674 PGBD1Q96JS3 809 aa12.42□□□□□ -0.42
PRPF4B-209ENST00000494674 SPATA32Q96LK8 384 aa12.42□□□□□ -0.42
PRPF4B-209ENST00000494674 GJB4Q9NTQ9 266 aa12.42□□□□□ -0.42
PRPF4B-209ENST00000494674 ATP6V0A2Q9Y487 856 aa12.42□□□□□ -0.42
PRPF4B-209ENST00000494674 SLX4Q8IY92 1834 aa12.41□□□□□ -0.42
PRPF4B-209ENST00000494674 ADAMTSL1Q8N6G6 1762 aa12.41□□□□□ -0.42
PRPF4B-209ENST00000494674 STK36Q9NRP7 1315 aa12.41□□□□□ -0.42
PRPF4B-209ENST00000494674 GOLGA8AA7E2F4 631 aa12.41□□□□□ -0.42
PRPF4B-209ENST00000494674 ORC4O43929 436 aa12.41□□□□□ -0.42
PRPF4B-209ENST00000494674 CYP2D6P10635 497 aa12.41□□□□□ -0.42
PRPF4B-209ENST00000494674 RCAN1P53805 252 aa12.41□□□□□ -0.42
PRPF4B-209ENST00000494674 PPP4CP60510 307 aa12.41□□□□□ -0.42
PRPF4B-209ENST00000494674 WTAPQ15007 396 aa12.41□□□□□ -0.42
PRPF4B-209ENST00000494674 NFXL1Q6ZNB6 911 aa12.41□□□□□ -0.42
PRPF4B-209ENST00000494674 CCDC144CPQ8IYA2 1237 aa12.41□□□□□ -0.42
PRPF4B-209ENST00000494674 ESR2Q92731 530 aa12.41□□□□□ -0.42
PRPF4B-209ENST00000494674 C8orf76Q96K31 380 aa12.41□□□□□ -0.42
PRPF4B-209ENST00000494674 AIFM3Q96NN9 605 aa12.41□□□□□ -0.42
PRPF4B-209ENST00000494674 FTOQ9C0B1 505 aaKnown RBP eCLIP12.41□□□□□ -0.42
PRPF4B-209ENST00000494674 ANO8Q9HCE9 1232 aaPredicted RBP12.41□□□□□ -0.42
PRPF4B-209ENST00000494674 SLC12A7Q9Y666 1083 aa12.41□□□□□ -0.42
PRPF4B-209ENST00000494674 ROBO3Q96MS0 1386 aa12.41□□□□□ -0.42
PRPF4B-209ENST00000494674 MROH7-TTC4A0A0A0MT08 1334 aa12.4□□□□□ -0.42
PRPF4B-209ENST00000494674 TNKSO95271 1327 aa12.4□□□□□ -0.42
PRPF4B-209ENST00000494674 FAM205AQ6ZU69 1335 aa12.4□□□□□ -0.42
PRPF4B-209ENST00000494674 CCDC69A6NI79 296 aa12.4□□□□□ -0.42
PRPF4B-209ENST00000494674 NPR1P16066 1061 aa12.4□□□□□ -0.42
PRPF4B-209ENST00000494674 LIG1P18858 919 aa12.4□□□□□ -0.42
PRPF4B-209ENST00000494674 ENAHQ8N8S7 591 aaPredicted RBP12.4□□□□□ -0.42
PRPF4B-209ENST00000494674 PHKBQ93100 1093 aa12.4□□□□□ -0.42
PRPF4B-209ENST00000494674 USP28Q96RU2 1077 aa12.4□□□□□ -0.42
PRPF4B-209ENST00000494674 RTFDC1Q9BY42 306 aaPredicted RBP12.4□□□□□ -0.42
PRPF4B-209ENST00000494674 TOMM22Q9NS69 142 aa12.4□□□□□ -0.42
PRPF4B-209ENST00000494674 KIF28PB7ZC32 967 aa12.4□□□□□ -0.43
PRPF4B-209ENST00000494674 UBE2Q2LH0YL09 131 aa12.4□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms