RNA–Protein interactions for RNA: YPR036W

VMA13, Transcript of Subunit H of the V1 peripheral membrane domain of V-ATPase, yeastyeast

Gene VMA13, Length 1,437 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VMA13YPR036W IRC20Q06554 1556 aa8.18□□□□□ -1.1
VMA13YPR036W ESP1Q03018 1630 aa8.14□□□□□ -1.11
VMA13YPR036W MMS1Q06211 1407 aa8.13□□□□□ -1.11
VMA13YPR036W LDB19Q12502 818 aa8.12□□□□□ -1.11
VMA13YPR036W GEA2P39993 1459 aaKnown RBP8.12□□□□□ -1.11
VMA13YPR036W BMT6Q12291 365 aa8.12□□□□□ -1.11
VMA13YPR036W ESC1Q03661 1658 aaKnown RBP8.1□□□□□ -1.11
VMA13YPR036W RPO31P04051 1460 aa8.1□□□□□ -1.11
VMA13YPR036W YAH1Q12184 172 aaKnown RBP8.1□□□□□ -1.11
VMA13YPR036W ULI1P43604 169 aa8.09□□□□□ -1.11
VMA13YPR036W SKI3P17883 1432 aaKnown RBP8.09□□□□□ -1.12
VMA13YPR036W RKR1Q04781 1562 aa8.03□□□□□ -1.12
VMA13YPR036W YPK9Q12697 1472 aa8.02□□□□□ -1.13
VMA13YPR036W PIB1Q06651 286 aa8.02□□□□□ -1.13
VMA13YPR036W UFD4P33202 1483 aa8.01□□□□□ -1.13
VMA13YPR036W IOC2Q12072 812 aa8.01□□□□□ -1.13
VMA13YPR036W POL1P13382 1468 aa8□□□□□ -1.13
VMA13YPR036W CHD1P32657 1468 aa8□□□□□ -1.13
VMA13YPR036W STU1P38198 1513 aa7.98□□□□□ -1.13
VMA13YPR036W SCC2Q04002 1493 aa7.96□□□□□ -1.14
VMA13YPR036W EAP1P36041 632 aaKnown RBP7.95□□□□□ -1.14
VMA13YPR036W MSB4Q12317 492 aa7.94□□□□□ -1.14
VMA13YPR036W MMS22Q06164 1454 aa7.93□□□□□ -1.14
VMA13YPR036W DNF2Q12675 1612 aa7.92□□□□□ -1.14
VMA13YPR036W DRS2P39524 1355 aa7.91□□□□□ -1.14
VMA13YPR036W RTG1P32607 177 aa7.89□□□□□ -1.15
VMA13YPR036W YTA7P40340 1379 aa7.89□□□□□ -1.15
VMA13YPR036W NCR1Q12200 1170 aa7.87□□□□□ -1.15
VMA13YPR036W PAN1P32521 1480 aa7.87□□□□□ -1.15
VMA13YPR036W YOR1P53049 1477 aa7.87□□□□□ -1.15
VMA13YPR036W YOR093CQ12275 1648 aa7.87□□□□□ -1.15
VMA13YPR036W TOP2P06786 1428 aaKnown RBP7.86□□□□□ -1.15
VMA13YPR036W SET4P42948 560 aa7.86□□□□□ -1.15
VMA13YPR036W TY1B-BRQ12193 1756 aa7.85□□□□□ -1.15
VMA13YPR036W TY1B-GR3Q12316 1755 aa7.85□□□□□ -1.15
VMA13YPR036W TY1B-ORQ92393 1755 aa7.85□□□□□ -1.15
VMA13YPR036W MRM1P25270 412 aa7.85□□□□□ -1.15
VMA13YPR036W AIM44Q99299 758 aa7.85□□□□□ -1.15
VMA13YPR036W TRP5P00931 707 aaKnown RBP7.84□□□□□ -1.15
VMA13YPR036W YLR271WQ06152 274 aa7.84□□□□□ -1.15
VMA13YPR036W YOL036WQ08206 761 aa7.83□□□□□ -1.16
VMA13YPR036W SAS10Q12136 610 aaPredicted RBP7.83□□□□□ -1.16
VMA13YPR036W TY2B-LR1P0C2J3 1770 aa7.82□□□□□ -1.16
VMA13YPR036W TY2B-FP0CX63 1770 aa7.82□□□□□ -1.16
VMA13YPR036W TY2B-GR2P0CX64 1770 aa7.82□□□□□ -1.16
VMA13YPR036W TY2B-CP25384 1770 aa7.82□□□□□ -1.16
VMA13YPR036W TY2B-DR2Q03494 1770 aa7.82□□□□□ -1.16
VMA13YPR036W TY1B-DR1Q03855 1755 aa7.82□□□□□ -1.16
VMA13YPR036W TY2B-DR3Q07791 1770 aaKnown RBP7.82□□□□□ -1.16
VMA13YPR036W TY2B-OR1Q12113 1770 aa7.82□□□□□ -1.16
VMA13YPR036W TY2B-DR1Q12472 1770 aa7.82□□□□□ -1.16
VMA13YPR036W TY2B-OR2Q12501 1770 aa7.82□□□□□ -1.16
VMA13YPR036W SMC4Q12267 1418 aa7.82□□□□□ -1.16
VMA13YPR036W NAP1P25293 417 aaKnown RBP7.81□□□□□ -1.16
VMA13YPR036W PSD2P53037 1138 aaKnown RBP7.81□□□□□ -1.16
VMA13YPR036W URN1Q06525 465 aaKnown RBP7.81□□□□□ -1.16
VMA13YPR036W YNL035CP53962 389 aaKnown RBP7.8□□□□□ -1.16
VMA13YPR036W TFG1P41895 735 aaPredicted RBP7.79□□□□□ -1.16
VMA13YPR036W TY1B-DR3Q99231 1755 aa7.79□□□□□ -1.16
VMA13YPR036W LEU3P08638 886 aa7.78□□□□□ -1.16
VMA13YPR036W SEC61P32915 480 aa7.78□□□□□ -1.16
VMA13YPR036W YRF1-1P0CX20 1796 aa7.78□□□□□ -1.16
VMA13YPR036W YRF1-5P0CX21 1796 aa7.78□□□□□ -1.16
VMA13YPR036W YRF1-8P0CX22 1796 aa7.78□□□□□ -1.16
VMA13YPR036W MYO4P32492 1471 aa7.78□□□□□ -1.16
VMA13YPR036W VPS15P22219 1454 aa7.76□□□□□ -1.17
VMA13YPR036W TY2B-BQ12491 1770 aa7.75□□□□□ -1.17
VMA13YPR036W YMR1P47147 688 aaKnown RBP RIP-Chip data7.74□□□□□ -1.17not detected
VMA13YPR036W DBP1P24784 617 aaKnown RBP7.71□□□□□ -1.17
VMA13YPR036W SNQ2P32568 1501 aaKnown RBP7.71□□□□□ -1.17
VMA13YPR036W STH1P32597 1359 aa7.71□□□□□ -1.18
VMA13YPR036W TY1B-HO13535 1793 aa7.69□□□□□ -1.18
VMA13YPR036W TY1B-DR5P0C2I2 1755 aa7.69□□□□□ -1.18
VMA13YPR036W TY1B-DR6P0C2I3 1755 aa7.69□□□□□ -1.18
VMA13YPR036W TY1B-LR2P0C2I5 1755 aa7.69□□□□□ -1.18
VMA13YPR036W TY1B-LR3P0C2I6 1755 aaKnown RBP7.69□□□□□ -1.18
VMA13YPR036W TY1B-PR1P0C2I9 1755 aaKnown RBP7.69□□□□□ -1.18
VMA13YPR036W TY1B-PR2P0C2J0 1756 aa7.69□□□□□ -1.18
VMA13YPR036W TY1B-PR3P0C2J1 1755 aaKnown RBP7.69□□□□□ -1.18
VMA13YPR036W TY1B-JR1P47098 1755 aa7.69□□□□□ -1.18
VMA13YPR036W TY1B-ML2Q03434 1755 aaKnown RBP7.69□□□□□ -1.18
VMA13YPR036W TY1B-ER1Q03612 1755 aa7.69□□□□□ -1.18
VMA13YPR036W TY1B-ML1Q04711 1755 aaKnown RBP7.69□□□□□ -1.18
VMA13YPR036W TY1B-GR2Q12269 1755 aa7.69□□□□□ -1.18
VMA13YPR036W TY1B-OLQ12273 1755 aa7.69□□□□□ -1.18
VMA13YPR036W TY1B-PLQ12414 1755 aaKnown RBP7.69□□□□□ -1.18
VMA13YPR036W BCK2P33306 851 aa7.69□□□□□ -1.18
VMA13YPR036W IOC4Q04213 475 aa7.69□□□□□ -1.18
VMA13YPR036W SPP41P38904 1435 aa7.69□□□□□ -1.18
VMA13YPR036W TRM732Q03496 1420 aa7.69□□□□□ -1.18
VMA13YPR036W SAP30P38429 201 aa7.68□□□□□ -1.18
VMA13YPR036W VMA1P17255 1071 aaKnown RBP7.67□□□□□ -1.18
VMA13YPR036W IFH1P39520 1085 aa7.67□□□□□ -1.18
VMA13YPR036W ARP8Q12386 881 aaKnown RBP RIP-Chip data7.67□□□□□ -1.18not detected
VMA13YPR036W NUP159P40477 1460 aa7.66□□□□□ -1.18
VMA13YPR036W DMA2P53924 522 aa7.65□□□□□ -1.18
VMA13YPR036W NTE1Q04958 1679 aa7.64□□□□□ -1.19
VMA13YPR036W RTG3P38165 486 aa7.63□□□□□ -1.19
VMA13YPR036W TSC11P40061 1430 aa7.63□□□□□ -1.19
VMA13YPR036W VPS29P38759 282 aa7.62□□□□□ -1.19
Retrieved 100 of 5,963 RNA–protein pairs in 6.6 ms