RNA–Protein interactions for RNA: YOR227W

HER1, Transcript of Protein of unknown function, yeastyeast

Gene HER1, Length 3,741 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HER1YOR227W CHC1P22137 1653 aaKnown RBP3.48□□□□□ -1.85
HER1YOR227W DOP1Q03921 1698 aa3.48□□□□□ -1.85
HER1YOR227W STU1P38198 1513 aa3.48□□□□□ -1.85
HER1YOR227W UFD4P33202 1483 aa3.48□□□□□ -1.85
HER1YOR227W DNF2Q12675 1612 aa3.47□□□□□ -1.85
HER1YOR227W SNT2P53127 1403 aa3.46□□□□□ -1.85
HER1YOR227W MYO4P32492 1471 aa3.46□□□□□ -1.86
HER1YOR227W HAP1P0CE41 1502 aa3.45□□□□□ -1.86
HER1YOR227W VTH1P40438 1549 aa3.44□□□□□ -1.86
HER1YOR227W VTH2P40890 1549 aa3.44□□□□□ -1.86
HER1YOR227W NUP170P38181 1502 aa3.44□□□□□ -1.86
HER1YOR227W TAF2P23255 1407 aa3.44□□□□□ -1.86
HER1YOR227W ARO1P08566 1588 aaKnown RBP3.44□□□□□ -1.86
HER1YOR227W PDR10P51533 1564 aa3.44□□□□□ -1.86
HER1YOR227W GDB1Q06625 1536 aa3.43□□□□□ -1.86
HER1YOR227W DIP2Q12220 943 aaPredicted RBP3.43□□□□□ -1.86
HER1YOR227W TY3B-GQ99315 1547 aa3.43□□□□□ -1.86
HER1YOR227W MMS22Q06164 1454 aa3.42□□□□□ -1.86
HER1YOR227W MIF2P35201 549 aa3.41□□□□□ -1.86
HER1YOR227W LTE1P07866 1435 aa3.4□□□□□ -1.86
HER1YOR227W VPS15P22219 1454 aa3.39□□□□□ -1.87
HER1YOR227W RSE1Q04693 1361 aaKnown RBP3.38□□□□□ -1.87
HER1YOR227W YOR093CQ12275 1648 aa3.38□□□□□ -1.87
HER1YOR227W DMA1P38823 416 aa3.38□□□□□ -1.87
HER1YOR227W SPP41P38904 1435 aa3.34□□□□□ -1.88
HER1YOR227W TSC11P40061 1430 aa3.33□□□□□ -1.88
HER1YOR227W SKI3P17883 1432 aaKnown RBP3.33□□□□□ -1.88
HER1YOR227W DNF3Q12674 1656 aa3.32□□□□□ -1.88
HER1YOR227W NUP159P40477 1460 aa3.32□□□□□ -1.88
HER1YOR227W BUD3P25558 1636 aa3.31□□□□□ -1.88
HER1YOR227W LEO1P38439 464 aa3.3□□□□□ -1.88
HER1YOR227W TRM3Q07527 1436 aa3.3□□□□□ -1.88
HER1YOR227W FAP1P53971 965 aa3.29□□□□□ -1.88
HER1YOR227W GEA2P39993 1459 aaKnown RBP3.29□□□□□ -1.88
HER1YOR227W SEC7P11075 2009 aaKnown RBP3.28□□□□□ -1.88
HER1YOR227W NUP188P52593 1655 aaKnown RBP3.27□□□□□ -1.89
HER1YOR227W IQG1Q12280 1495 aa3.27□□□□□ -1.89
HER1YOR227W PDR15Q04182 1529 aaKnown RBP3.26□□□□□ -1.89
HER1YOR227W VMR1P38735 1592 aa3.24□□□□□ -1.89
HER1YOR227W PDR5P33302 1511 aaKnown RBP3.24□□□□□ -1.89
HER1YOR227W YRF1-2P40105 1681 aa3.23□□□□□ -1.89
HER1YOR227W TRM732Q03496 1420 aa3.22□□□□□ -1.89
HER1YOR227W TY1B-NL2Q99337 1749 aaKnown RBP3.21□□□□□ -1.9
HER1YOR227W IML1P47170 1584 aa3.21□□□□□ -1.9
HER1YOR227W USO1P25386 1790 aa3.2□□□□□ -1.9
HER1YOR227W GCN2P15442 1659 aa3.2□□□□□ -1.9
HER1YOR227W ABP1P15891 592 aaKnown RBP3.2□□□□□ -1.9
HER1YOR227W YTA7P40340 1379 aa3.2□□□□□ -1.9
HER1YOR227W NUP192P47054 1683 aa3.19□□□□□ -1.9
HER1YOR227W CAT8P39113 1433 aa3.19□□□□□ -1.9
HER1YOR227W YSP2Q06681 1438 aa3.15□□□□□ -1.91
HER1YOR227W SAS10Q12136 610 aaPredicted RBP3.14□□□□□ -1.91
HER1YOR227W LEU3P08638 886 aa3.13□□□□□ -1.91
HER1YOR227W MMS1Q06211 1407 aa3.11□□□□□ -1.91
HER1YOR227W PTP3P40048 928 aa3.09□□□□□ -1.91
HER1YOR227W PRY3P47033 881 aa3.09□□□□□ -1.91
HER1YOR227W DRS2P39524 1355 aa3.08□□□□□ -1.92
HER1YOR227W IFH1P39520 1085 aa3.08□□□□□ -1.92
HER1YOR227W STH1P32597 1359 aa3.08□□□□□ -1.92
HER1YOR227W YIL177CP40434 1758 aa3.08□□□□□ -1.92
HER1YOR227W YJL225CP40889 1758 aa3.08□□□□□ -1.92
HER1YOR227W DMA2P53924 522 aa3.07□□□□□ -1.92
HER1YOR227W ITT1Q04638 464 aa3.07□□□□□ -1.92
HER1YOR227W TY4B-HP0C2J7 1802 aa3.06□□□□□ -1.92
HER1YOR227W TY4B-JP47024 1803 aa3.06□□□□□ -1.92
HER1YOR227W RPG1P38249 964 aaKnown RBP3.05□□□□□ -1.92
HER1YOR227W GEA1P47102 1408 aaPredicted RBP3.05□□□□□ -1.92
HER1YOR227W FKS3Q04952 1785 aa3.04□□□□□ -1.92
HER1YOR227W RRP5Q05022 1729 aaKnown RBP3.04□□□□□ -1.92
HER1YOR227W YFR006WP43590 535 aa3.03□□□□□ -1.92
HER1YOR227W RIM101P33400 625 aa3.02□□□□□ -1.93
HER1YOR227W ORC1P54784 914 aaPredicted RBP3.02□□□□□ -1.93
HER1YOR227W TSR3Q12094 313 aaKnown RBP3.02□□□□□ -1.93
HER1YOR227W NUP157P40064 1391 aaKnown RBP3.01□□□□□ -1.93
HER1YOR227W YRF1-3P0CX14 1859 aa3.01□□□□□ -1.93
HER1YOR227W YRF1-7P0CX15 1859 aa3.01□□□□□ -1.93
HER1YOR227W YRF1-6P53819 1859 aa3.01□□□□□ -1.93
HER1YOR227W SSP1P38871 571 aa3.01□□□□□ -1.93
HER1YOR227W BCK1Q01389 1478 aa3□□□□□ -1.93
HER1YOR227W SPT21P35209 758 aa3□□□□□ -1.93
HER1YOR227W TY3B-IQ7LHG5 1498 aaKnown RBP3□□□□□ -1.93
HER1YOR227W IOC4Q04213 475 aa2.99□□□□□ -1.93
HER1YOR227W SRB8P25648 1427 aa2.98□□□□□ -1.93
HER1YOR227W OXP1P28273 1286 aa2.97□□□□□ -1.93
HER1YOR227W SNF2P22082 1703 aa2.97□□□□□ -1.93
HER1YOR227W URB1P34241 1764 aaKnown RBP2.97□□□□□ -1.93
HER1YOR227W PDR11P40550 1411 aa2.97□□□□□ -1.93
HER1YOR227W PRI1P10363 409 aa2.96□□□□□ -1.94
HER1YOR227W MET10P39692 1035 aa2.96□□□□□ -1.94
HER1YOR227W RLF2Q12495 606 aa2.95□□□□□ -1.94
HER1YOR227W RPN1P38764 993 aaKnown RBP2.95□□□□□ -1.94
HER1YOR227W CFT1Q06632 1357 aaKnown RBP2.95□□□□□ -1.94
HER1YOR227W NAP1P25293 417 aaKnown RBP2.94□□□□□ -1.94
HER1YOR227W YLR271WQ06152 274 aa2.94□□□□□ -1.94
HER1YOR227W APC1P53886 1748 aa2.94□□□□□ -1.94
HER1YOR227W RPL17AP05740 184 aaKnown RBP2.94□□□□□ -1.94
HER1YOR227W RPL17BP46990 184 aaKnown RBP2.94□□□□□ -1.94
HER1YOR227W AAD16Q02895 342 aa2.94□□□□□ -1.94
HER1YOR227W RIM15P43565 1770 aa2.94□□□□□ -1.94
HER1YOR227W UTP10P42945 1769 aaKnown RBP2.93□□□□□ -1.94
Retrieved 100 of 5,963 RNA–protein pairs in 35.7 ms