RNA–Protein interactions for RNA: YLR436C

ECM30, Transcript of Putative protein of unknown function, yeastyeast

Gene ECM30, Length 3,825 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ECM30YLR436C SIC1P38634 284 aa8.14□□□□□ -1.11
ECM30YLR436C SPT6P23615 1451 aaKnown RBP8.13□□□□□ -1.11
ECM30YLR436C YPK9Q12697 1472 aa8.13□□□□□ -1.11
ECM30YLR436C PIL1P53252 339 aaKnown RBP8.13□□□□□ -1.11
ECM30YLR436C YIR014WP40570 242 aa8.13□□□□□ -1.11
ECM30YLR436C RLP24Q07915 199 aaKnown RBP8.13□□□□□ -1.11
ECM30YLR436C YPP1P46951 817 aa8.12□□□□□ -1.11
ECM30YLR436C PSD2P53037 1138 aaKnown RBP8.12□□□□□ -1.11
ECM30YLR436C MLP2P40457 1679 aa8.12□□□□□ -1.11
ECM30YLR436C IFH1P39520 1085 aa8.12□□□□□ -1.11
ECM30YLR436C ETT1Q08421 412 aaKnown RBP8.11□□□□□ -1.11
ECM30YLR436C MSH3P25336 1018 aa8.1□□□□□ -1.11
ECM30YLR436C DJP1P40564 432 aa8.1□□□□□ -1.11
ECM30YLR436C GRX3Q03835 250 aa8.1□□□□□ -1.11
ECM30YLR436C NOT3P06102 836 aaKnown RBP8.08□□□□□ -1.12
ECM30YLR436C IRC20Q06554 1556 aa8.07□□□□□ -1.12
ECM30YLR436C EDE1P34216 1381 aa8.07□□□□□ -1.12
ECM30YLR436C MSH4P40965 878 aaPredicted RBP8.07□□□□□ -1.12
ECM30YLR436C DOS2P54858 310 aa8.07□□□□□ -1.12
ECM30YLR436C RPN1P38764 993 aaKnown RBP8.07□□□□□ -1.12
ECM30YLR436C BYE1P36106 594 aa8.06□□□□□ -1.12
ECM30YLR436C STU1P38198 1513 aa8.05□□□□□ -1.12
ECM30YLR436C CLB5P30283 435 aa8.05□□□□□ -1.12
ECM30YLR436C SMC4Q12267 1418 aa8.04□□□□□ -1.12
ECM30YLR436C ABP1P15891 592 aaKnown RBP8.04□□□□□ -1.12
ECM30YLR436C KNS1P32350 737 aaPredicted RBP8.04□□□□□ -1.12
ECM30YLR436C PRP3Q03338 469 aaPredicted RBP8.04□□□□□ -1.12
ECM30YLR436C BMS1Q08965 1183 aaKnown RBP8.04□□□□□ -1.12
ECM30YLR436C NNF2P53253 936 aa8.03□□□□□ -1.12
ECM30YLR436C DSN1P40568 576 aa8.03□□□□□ -1.12
ECM30YLR436C ECM16Q04217 1267 aaKnown RBP8.03□□□□□ -1.12
ECM30YLR436C MED8P38304 223 aa8.02□□□□□ -1.13
ECM30YLR436C TIF4632P39936 914 aaKnown RBP8.02□□□□□ -1.13
ECM30YLR436C TAF2P23255 1407 aa8.02□□□□□ -1.13
ECM30YLR436C PCT1P13259 424 aa8.02□□□□□ -1.13
ECM30YLR436C ECM1P39715 212 aa8□□□□□ -1.13
ECM30YLR436C SCC2Q04002 1493 aa8□□□□□ -1.13
ECM30YLR436C MSP1P28737 362 aa7.99□□□□□ -1.13
ECM30YLR436C DNA2P38859 1522 aa7.99□□□□□ -1.13
ECM30YLR436C LTV1P34078 463 aa7.99□□□□□ -1.13
ECM30YLR436C RPN7Q06103 429 aaKnown RBP7.99□□□□□ -1.13
ECM30YLR436C REV3P14284 1504 aa7.98□□□□□ -1.13
ECM30YLR436C TY1B-DR4Q07793 1604 aa7.97□□□□□ -1.13
ECM30YLR436C TAN1P53072 289 aaPredicted RBP7.97□□□□□ -1.13
ECM30YLR436C KIP3P53086 805 aaKnown RBP7.96□□□□□ -1.13
ECM30YLR436C NOP8Q08287 484 aaPredicted RBP7.96□□□□□ -1.13
ECM30YLR436C BPT1P14772 1559 aa7.96□□□□□ -1.14
ECM30YLR436C ARL1P38116 183 aaKnown RBP7.95□□□□□ -1.14
ECM30YLR436C SAP190P36123 1033 aa7.94□□□□□ -1.14
ECM30YLR436C SRP54P20424 541 aaKnown RBP7.94□□□□□ -1.14
ECM30YLR436C PAN1P32521 1480 aa7.94□□□□□ -1.14
ECM30YLR436C NST1P53935 1240 aa7.94□□□□□ -1.14
ECM30YLR436C YSH1Q06224 779 aaPredicted RBP7.94□□□□□ -1.14
ECM30YLR436C VPS24P36095 224 aaKnown RBP7.93□□□□□ -1.14
ECM30YLR436C CHZ1P40019 153 aaPredicted RBP7.93□□□□□ -1.14
ECM30YLR436C TRM3Q07527 1436 aa7.92□□□□□ -1.14
ECM30YLR436C MDG1P53885 366 aa7.92□□□□□ -1.14
ECM30YLR436C SNU71P53207 620 aaKnown RBP7.92□□□□□ -1.14
ECM30YLR436C SIN3P22579 1536 aa7.91□□□□□ -1.14
ECM30YLR436C CIN4P39110 191 aa7.91□□□□□ -1.14
ECM30YLR436C GCN2P15442 1659 aa7.91□□□□□ -1.14
ECM30YLR436C RAD2P07276 1031 aa7.91□□□□□ -1.14
ECM30YLR436C MHP1P43638 1398 aa7.9□□□□□ -1.14
ECM30YLR436C PAP2P53632 584 aaKnown RBP7.9□□□□□ -1.14
ECM30YLR436C TPM2P40414 161 aa7.9□□□□□ -1.14
ECM30YLR436C RAD51P25454 400 aa7.9□□□□□ -1.15
ECM30YLR436C NOP14Q99207 810 aaKnown RBP7.9□□□□□ -1.15
ECM30YLR436C RSC1P53236 928 aa7.89□□□□□ -1.15
ECM30YLR436C CLB1P24868 471 aa7.89□□□□□ -1.15
ECM30YLR436C RPS0AP32905 252 aaKnown RBP7.89□□□□□ -1.15
ECM30YLR436C CBF5P33322 483 aaKnown RBP RIP-Chip data7.89□□□□□ -1.15not detected
ECM30YLR436C DEP1P31385 405 aa7.88□□□□□ -1.15
ECM30YLR436C TLG1Q03322 224 aa7.88□□□□□ -1.15
ECM30YLR436C RRP14P36080 434 aaKnown RBP7.88□□□□□ -1.15
ECM30YLR436C VPS60Q03390 229 aa7.88□□□□□ -1.15
ECM30YLR436C RIM101P33400 625 aa7.87□□□□□ -1.15
ECM30YLR436C YCF1P39109 1515 aaKnown RBP7.87□□□□□ -1.15
ECM30YLR436C VPS72Q03388 795 aa7.87□□□□□ -1.15
ECM30YLR436C TEA1P47988 759 aa7.87□□□□□ -1.15
ECM30YLR436C POL1P13382 1468 aa7.87□□□□□ -1.15
ECM30YLR436C RSC8P43609 557 aaKnown RBP7.86□□□□□ -1.15
ECM30YLR436C SWI3P32591 825 aa7.85□□□□□ -1.15
ECM30YLR436C RVB2Q12464 471 aaKnown RBP7.85□□□□□ -1.15
ECM30YLR436C GEA1P47102 1408 aaPredicted RBP7.85□□□□□ -1.15
ECM30YLR436C RRP15Q06511 250 aaPredicted RBP7.85□□□□□ -1.15
ECM30YLR436C TCD1P38756 429 aa7.84□□□□□ -1.15
ECM30YLR436C UBP10P53874 792 aaPredicted RBP7.84□□□□□ -1.15
ECM30YLR436C UTP13Q05946 817 aaKnown RBP7.84□□□□□ -1.15
ECM30YLR436C YOL087CQ99247 1116 aa7.84□□□□□ -1.15
ECM30YLR436C RNT1Q02555 471 aa7.84□□□□□ -1.15
ECM30YLR436C NHA1Q99271 985 aa7.83□□□□□ -1.16
ECM30YLR436C ERV41Q04651 352 aa7.83□□□□□ -1.16
ECM30YLR436C LSP1Q12230 341 aaKnown RBP7.83□□□□□ -1.16
ECM30YLR436C SSK2P53599 1579 aa7.83□□□□□ -1.16
ECM30YLR436C HOS3Q02959 697 aaKnown RBP7.83□□□□□ -1.16
ECM30YLR436C HSL1P34244 1518 aa7.83□□□□□ -1.16
ECM30YLR436C SPB4P25808 606 aaPredicted RBP7.82□□□□□ -1.16
ECM30YLR436C TSC11P40061 1430 aa7.82□□□□□ -1.16
ECM30YLR436C APL5Q08951 932 aaKnown RBP7.82□□□□□ -1.16
ECM30YLR436C VPS27P40343 622 aaKnown RBP7.82□□□□□ -1.16
Retrieved 100 of 5,963 RNA–protein pairs in 12.8 ms