RNA–Protein interactions for RNA: YKL085W

MDH1, Transcript of Mitochondrial malate dehydrogenase, yeastyeast

Gene MDH1, Length 1,005 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MDH1YKL085W NTE1Q04958 1679 aa11.35□□□□□ -0.59
MDH1YKL085W NUP159P40477 1460 aa11.34□□□□□ -0.59
MDH1YKL085W YOR1P53049 1477 aa11.34□□□□□ -0.59
MDH1YKL085W MMS1Q06211 1407 aa11.34□□□□□ -0.59
MDH1YKL085W SMC4Q12267 1418 aa11.34□□□□□ -0.59
MDH1YKL085W IRC20Q06554 1556 aa11.33□□□□□ -0.6
MDH1YKL085W VPS15P22219 1454 aa11.32□□□□□ -0.6
MDH1YKL085W SPP41P38904 1435 aa11.32□□□□□ -0.6
MDH1YKL085W RPO21P04050 1733 aaKnown RBP11.3□□□□□ -0.6
MDH1YKL085W ABP1P15891 592 aaKnown RBP11.3□□□□□ -0.6
MDH1YKL085W STU1P38198 1513 aa11.29□□□□□ -0.6
MDH1YKL085W VTH1P40438 1549 aa11.26□□□□□ -0.61
MDH1YKL085W VTH2P40890 1549 aa11.26□□□□□ -0.61
MDH1YKL085W DRS2P39524 1355 aa11.26□□□□□ -0.61
MDH1YKL085W PRI1P10363 409 aa11.25□□□□□ -0.61
MDH1YKL085W TSC11P40061 1430 aa11.25□□□□□ -0.61
MDH1YKL085W YFR006WP43590 535 aa11.24□□□□□ -0.61
MDH1YKL085W DNF2Q12675 1612 aa11.21□□□□□ -0.61
MDH1YKL085W MYO4P32492 1471 aa11.13□□□□□ -0.63
MDH1YKL085W SNT2P53127 1403 aa11.11□□□□□ -0.63
MDH1YKL085W SPO14P36126 1683 aa11.11□□□□□ -0.63
MDH1YKL085W SNQ2P32568 1501 aaKnown RBP11.1□□□□□ -0.63
MDH1YKL085W NUP170P38181 1502 aa11.1□□□□□ -0.63
MDH1YKL085W ULS1Q08562 1619 aa11.03□□□□□ -0.64
MDH1YKL085W DOP1Q03921 1698 aa11.03□□□□□ -0.64
MDH1YKL085W PDR12Q02785 1511 aa10.98□□□□□ -0.65
MDH1YKL085W YOR093CQ12275 1648 aa10.96□□□□□ -0.65
MDH1YKL085W MET10P39692 1035 aa10.95□□□□□ -0.66
MDH1YKL085W MLP2P40457 1679 aa10.92□□□□□ -0.66
MDH1YKL085W YTA7P40340 1379 aa10.91□□□□□ -0.66
MDH1YKL085W GDB1Q06625 1536 aa10.91□□□□□ -0.66
MDH1YKL085W STH1P32597 1359 aa10.9□□□□□ -0.67
MDH1YKL085W TRM3Q07527 1436 aa10.87□□□□□ -0.67
MDH1YKL085W IQG1Q12280 1495 aa10.87□□□□□ -0.67
MDH1YKL085W PDR10P51533 1564 aa10.86□□□□□ -0.67
MDH1YKL085W ARO1P08566 1588 aaKnown RBP10.81□□□□□ -0.68
MDH1YKL085W NUP157P40064 1391 aaKnown RBP10.79□□□□□ -0.68
MDH1YKL085W RTT106P40161 455 aa10.79□□□□□ -0.68
MDH1YKL085W BUD3P25558 1636 aa10.79□□□□□ -0.68
MDH1YKL085W CHC1P22137 1653 aaKnown RBP10.79□□□□□ -0.68
MDH1YKL085W BFR2Q06631 534 aaKnown RBP10.77□□□□□ -0.69
MDH1YKL085W PDR15Q04182 1529 aaKnown RBP10.77□□□□□ -0.69
MDH1YKL085W DNF3Q12674 1656 aa10.72□□□□□ -0.69
MDH1YKL085W TFA1P36100 482 aa10.67□□□□□ -0.7
MDH1YKL085W SEC7P11075 2009 aaKnown RBP10.64□□□□□ -0.71
MDH1YKL085W YBT1P32386 1661 aa10.58□□□□□ -0.72
MDH1YKL085W TY3B-GQ99315 1547 aa10.57□□□□□ -0.72
MDH1YKL085W TSR3Q12094 313 aaKnown RBP10.55□□□□□ -0.72
MDH1YKL085W CAT8P39113 1433 aa10.51□□□□□ -0.73
MDH1YKL085W YSP2Q06681 1438 aa10.5□□□□□ -0.73
MDH1YKL085W USO1P25386 1790 aa10.5□□□□□ -0.73
MDH1YKL085W YAP3P38749 330 aa10.5□□□□□ -0.73
MDH1YKL085W SAS10Q12136 610 aaPredicted RBP10.5□□□□□ -0.73
MDH1YKL085W ISW2Q08773 1120 aa10.46□□□□□ -0.73
MDH1YKL085W GEA1P47102 1408 aaPredicted RBP10.46□□□□□ -0.74
MDH1YKL085W IFH1P39520 1085 aa10.44□□□□□ -0.74
MDH1YKL085W BNR1P40450 1375 aa10.43□□□□□ -0.74
MDH1YKL085W RPG1P38249 964 aaKnown RBP10.43□□□□□ -0.74
MDH1YKL085W MAK10Q02197 733 aa10.43□□□□□ -0.74
MDH1YKL085W TAF7Q05021 590 aa10.43□□□□□ -0.74
MDH1YKL085W CKB1P43639 278 aa10.35□□□□□ -0.75
MDH1YKL085W IML1P47170 1584 aa10.32□□□□□ -0.76
MDH1YKL085W NUP188P52593 1655 aaKnown RBP10.3□□□□□ -0.76
MDH1YKL085W HAP1P0CE41 1502 aa10.29□□□□□ -0.76
MDH1YKL085W TY1B-NL2Q99337 1749 aaKnown RBP10.27□□□□□ -0.76
MDH1YKL085W URN1Q06525 465 aaKnown RBP10.27□□□□□ -0.77
MDH1YKL085W YGL015CP33199 130 aa10.21□□□□□ -0.77
MDH1YKL085W SRB8P25648 1427 aa10.21□□□□□ -0.78
MDH1YKL085W VMR1P38735 1592 aa10.2□□□□□ -0.78
MDH1YKL085W IPL1P38991 367 aa10.2□□□□□ -0.78
MDH1YKL085W THI12P42883 340 aa10.2□□□□□ -0.78
MDH1YKL085W THI5P43534 340 aa10.2□□□□□ -0.78
MDH1YKL085W THI11P47183 340 aa10.2□□□□□ -0.78
MDH1YKL085W THI13Q07748 340 aa10.2□□□□□ -0.78
MDH1YKL085W YMR196WQ04336 1088 aa10.18□□□□□ -0.78
MDH1YKL085W TYS1P36421 394 aaKnown RBP10.15□□□□□ -0.78
MDH1YKL085W MRPL32P25348 183 aa10.14□□□□□ -0.79
MDH1YKL085W BUD31P25337 157 aaPredicted RBP10.11□□□□□ -0.79
MDH1YKL085W PDR5P33302 1511 aaKnown RBP10.07□□□□□ -0.8
MDH1YKL085W BUD21Q08492 214 aaPredicted RBP10.05□□□□□ -0.8
MDH1YKL085W YAH1Q12184 172 aaKnown RBP10.02□□□□□ -0.81
MDH1YKL085W AVT3P36062 692 aa10.01□□□□□ -0.81
MDH1YKL085W GLN1P32288 370 aaKnown RBP10□□□□□ -0.81
MDH1YKL085W PDR11P40550 1411 aa9.93□□□□□ -0.82
MDH1YKL085W APP1P53933 587 aa9.93□□□□□ -0.82
MDH1YKL085W PTP3P40048 928 aa9.92□□□□□ -0.82
MDH1YKL085W DIP2Q12220 943 aaPredicted RBP9.92□□□□□ -0.82
MDH1YKL085W CFT1Q06632 1357 aaKnown RBP9.91□□□□□ -0.82
MDH1YKL085W YIL055CP40523 627 aaKnown RBP9.91□□□□□ -0.82
MDH1YKL085W KRE5P22023 1365 aa9.89□□□□□ -0.83
MDH1YKL085W BCK1Q01389 1478 aa9.87□□□□□ -0.83
MDH1YKL085W GCN2P15442 1659 aa9.87□□□□□ -0.83
MDH1YKL085W YNR029CP53729 429 aaKnown RBP9.82□□□□□ -0.84
MDH1YKL085W RIA1P53893 1110 aa9.82□□□□□ -0.84
MDH1YKL085W NUP192P47054 1683 aa9.82□□□□□ -0.84
MDH1YKL085W REB1P21538 810 aa9.79□□□□□ -0.84
MDH1YKL085W MRX12P47084 519 aa9.76□□□□□ -0.85
MDH1YKL085W YMR074CQ04773 145 aa9.76□□□□□ -0.85
MDH1YKL085W IKI3Q06706 1349 aaKnown RBP9.76□□□□□ -0.85
MDH1YKL085W YRF1-2P40105 1681 aa9.75□□□□□ -0.85
Retrieved 100 of 5,963 RNA–protein pairs in 6.9 ms