RNA–Protein interactions for RNA: YKL022C

CDC16, Transcript of Subunit of the anaphase-promoting complex/cyclosome (APC/C), yeastyeast

Gene CDC16, Length 2,523 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC16YKL022C SEN54Q02825 467 aaPredicted RBP9.09□□□□□ -0.95
CDC16YKL022C NOP53Q12080 455 aaKnown RBP9.08□□□□□ -0.96
CDC16YKL022C TOP1P04786 769 aa9.08□□□□□ -0.96
CDC16YKL022C ERG12P07277 443 aa9.07□□□□□ -0.96
CDC16YKL022C CPS1P27614 576 aa9.07□□□□□ -0.96
CDC16YKL022C SSF1P38789 453 aaPredicted RBP9.07□□□□□ -0.96
CDC16YKL022C SSA2P10592 639 aaKnown RBP9.06□□□□□ -0.96
CDC16YKL022C EPS1P40557 701 aa9.05□□□□□ -0.96
CDC16YKL022C NOB1Q08444 459 aaKnown RBP9.05□□□□□ -0.96
CDC16YKL022C TIF1P10081 395 aaKnown RBP9.05□□□□□ -0.96
CDC16YKL022C CDC3P32457 520 aaKnown RBP9.05□□□□□ -0.96
CDC16YKL022C YTA7P40340 1379 aa9.05□□□□□ -0.96
CDC16YKL022C HEM3P28789 327 aa9.04□□□□□ -0.96
CDC16YKL022C RPL34AP87262 121 aaPredicted RBP9.04□□□□□ -0.96
CDC16YKL022C CSN12P47130 423 aa9.03□□□□□ -0.96
CDC16YKL022C CDC27P38042 758 aa9.02□□□□□ -0.96
CDC16YKL022C URN1Q06525 465 aaKnown RBP9.02□□□□□ -0.96
CDC16YKL022C TTI1P36097 1038 aa9.02□□□□□ -0.97
CDC16YKL022C VPS29P38759 282 aa9.02□□□□□ -0.97
CDC16YKL022C EDS1P38073 919 aa9.01□□□□□ -0.97
CDC16YKL022C BRN1P38170 754 aa9□□□□□ -0.97
CDC16YKL022C RPL34BP40525 121 aaKnown RBP8.98□□□□□ -0.97
CDC16YKL022C OCA5P38738 679 aa8.97□□□□□ -0.97
CDC16YKL022C BDF1P35817 686 aa8.96□□□□□ -0.97
CDC16YKL022C SPC42P36094 363 aa8.96□□□□□ -0.97
CDC16YKL022C MIF2P35201 549 aa8.96□□□□□ -0.98
CDC16YKL022C UBP14P38237 781 aaKnown RBP8.96□□□□□ -0.98
CDC16YKL022C YPR204WQ08995 1032 aa8.96□□□□□ -0.98
CDC16YKL022C KTR1P27810 393 aaKnown RBP8.95□□□□□ -0.98
CDC16YKL022C HAT1Q12341 374 aa8.95□□□□□ -0.98
CDC16YKL022C FAR11P53917 953 aa8.94□□□□□ -0.98
CDC16YKL022C YDR090CQ03193 310 aa8.94□□□□□ -0.98
CDC16YKL022C BIO2P32451 375 aa8.93□□□□□ -0.98
CDC16YKL022C DOS2P54858 310 aa8.93□□□□□ -0.98
CDC16YKL022C YML083CQ04526 418 aa8.93□□□□□ -0.98
CDC16YKL022C MRPL32P25348 183 aa8.92□□□□□ -0.98
CDC16YKL022C RTG2P32608 588 aaKnown RBP8.91□□□□□ -0.98
CDC16YKL022C ATG36P46983 293 aa8.91□□□□□ -0.98
CDC16YKL022C PUP1P25043 261 aa8.89□□□□□ -0.99
CDC16YKL022C YBL036CP38197 257 aa8.88□□□□□ -0.99
CDC16YKL022C ITT1Q04638 464 aa8.88□□□□□ -0.99
CDC16YKL022C LAM6Q08001 693 aa8.88□□□□□ -0.99
CDC16YKL022C IPL1P38991 367 aa8.87□□□□□ -0.99
CDC16YKL022C STS1P38637 319 aa8.86□□□□□ -0.99
CDC16YKL022C VHR2P40041 505 aa8.86□□□□□ -0.99
CDC16YKL022C TYW1Q08960 810 aaKnown RBP8.86□□□□□ -0.99
CDC16YKL022C PSE1P32337 1089 aaKnown RBP8.86□□□□□ -0.99
CDC16YKL022C ALD2P47771 506 aa8.86□□□□□ -0.99
CDC16YKL022C YNL108CP53929 270 aa8.84□□□□□ -0.99
CDC16YKL022C PTC3P34221 468 aaKnown RBP8.83□□□□□ -1
CDC16YKL022C ALD4P46367 519 aaKnown RBP8.83□□□□□ -1
CDC16YKL022C ASF1P32447 279 aa8.81□□□□□ -1
CDC16YKL022C NUG1P40010 520 aaKnown RBP8.81□□□□□ -1
CDC16YKL022C YMR1P47147 688 aaKnown RBP RIP-Chip data8.8□□□□□ -1not detected
CDC16YKL022C STM1P39015 273 aaKnown RBP8.79□□□□□ -1
CDC16YKL022C YLR326WQ06170 240 aaKnown RBP8.79□□□□□ -1
CDC16YKL022C RRP15Q06511 250 aaPredicted RBP8.79□□□□□ -1
CDC16YKL022C FPR4Q06205 392 aaPredicted RBP8.79□□□□□ -1
CDC16YKL022C SUP45P12385 437 aaKnown RBP8.78□□□□□ -1
CDC16YKL022C YRB30P53107 440 aaPredicted RBP8.78□□□□□ -1
CDC16YKL022C YAF9P53930 226 aa8.78□□□□□ -1
CDC16YKL022C SWE1P32944 819 aa8.76□□□□□ -1.01
CDC16YKL022C YFR006WP43590 535 aa8.76□□□□□ -1.01
CDC16YKL022C TEA1P47988 759 aa8.76□□□□□ -1.01
CDC16YKL022C ENO1P00924 437 aaKnown RBP8.76□□□□□ -1.01
CDC16YKL022C CST6P40535 587 aa8.75□□□□□ -1.01
CDC16YKL022C NNF1P47149 201 aa8.75□□□□□ -1.01
CDC16YKL022C RTS3P53289 263 aa8.75□□□□□ -1.01
CDC16YKL022C YBL113CQ7M4S9 792 aa8.75□□□□□ -1.01
CDC16YKL022C KEX1P09620 729 aa8.74□□□□□ -1.01
CDC16YKL022C SEC20P28791 383 aa8.74□□□□□ -1.01
CDC16YKL022C YJR008WP47085 338 aa8.74□□□□□ -1.01
CDC16YKL022C DBP1P24784 617 aaKnown RBP8.74□□□□□ -1.01
CDC16YKL022C CSE4P36012 229 aa8.74□□□□□ -1.01
CDC16YKL022C NMD2P38798 1089 aaKnown RBP8.74□□□□□ -1.01
CDC16YKL022C MRX10Q05648 414 aa8.74□□□□□ -1.01
CDC16YKL022C ATE1P16639 503 aa8.73□□□□□ -1.01
CDC16YKL022C TGL4P36165 910 aa8.73□□□□□ -1.01
CDC16YKL022C RAD59Q12223 238 aa8.73□□□□□ -1.01
CDC16YKL022C ENO2P00925 437 aaKnown RBP8.72□□□□□ -1.01
CDC16YKL022C MSC6Q08818 692 aaKnown RBP8.72□□□□□ -1.01
CDC16YKL022C SIS2P36024 562 aa8.71□□□□□ -1.02
CDC16YKL022C KIC1P38692 1080 aa8.71□□□□□ -1.02
CDC16YKL022C ERP5P38819 212 aa8.71□□□□□ -1.02
CDC16YKL022C YDJ1P25491 409 aaKnown RBP8.69□□□□□ -1.02
CDC16YKL022C PCS60P38137 543 aaKnown RBP RIP-Chip data8.69□□□□□ -1.02 RIP-Chip
CDC16YKL022C ORC6P38826 435 aa8.69□□□□□ -1.02
CDC16YKL022C POL32P47110 350 aa8.68□□□□□ -1.02
CDC16YKL022C PKH3Q03306 898 aaPredicted RBP8.68□□□□□ -1.02
CDC16YKL022C SVF1Q05515 481 aa8.67□□□□□ -1.02
CDC16YKL022C RIM21P48565 533 aa8.66□□□□□ -1.02
CDC16YKL022C SCY1P53009 804 aa8.66□□□□□ -1.02
CDC16YKL022C RNH70P53331 553 aa8.66□□□□□ -1.02
CDC16YKL022C HST2P53686 357 aa8.66□□□□□ -1.02
CDC16YKL022C NIS1P53939 407 aa8.65□□□□□ -1.02
CDC16YKL022C RAD54P32863 898 aa8.65□□□□□ -1.02
CDC16YKL022C ESS1P22696 170 aa8.64□□□□□ -1.03
CDC16YKL022C FPK1P53739 893 aa8.64□□□□□ -1.03
CDC16YKL022C MAG2Q06436 670 aaKnown RBP8.64□□□□□ -1.03
CDC16YKL022C WHI5Q12416 295 aa8.64□□□□□ -1.03
Retrieved 100 of 5,963 RNA–protein pairs in 15.7 ms