RNA–Protein interactions for RNA: YJL029C

VPS53, Transcript of Component of the GARP (Golgi-associated retrograde protein) complex, yeastyeast

Gene VPS53, Length 2,469 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS53YJL029C TY1B-LR1Q12088 1755 aaKnown RBP5.89□□□□□ -1.47
VPS53YJL029C TY1B-NL1Q12112 1755 aa5.89□□□□□ -1.47
VPS53YJL029C TY1B-GR1Q12141 1755 aa5.89□□□□□ -1.47
VPS53YJL029C TY1B-BLQ12490 1755 aa5.89□□□□□ -1.47
VPS53YJL029C BFR2Q06631 534 aaKnown RBP5.89□□□□□ -1.47
VPS53YJL029C NTE1Q04958 1679 aa5.88□□□□□ -1.47
VPS53YJL029C GEA2P39993 1459 aaKnown RBP5.87□□□□□ -1.47
VPS53YJL029C VTH1P40438 1549 aa5.87□□□□□ -1.47
VPS53YJL029C VTH2P40890 1549 aa5.87□□□□□ -1.47
VPS53YJL029C YTA7P40340 1379 aa5.87□□□□□ -1.47
VPS53YJL029C RPO21P04050 1733 aaKnown RBP5.86□□□□□ -1.47
VPS53YJL029C TSC11P40061 1430 aa5.86□□□□□ -1.47
VPS53YJL029C YRF1-1P0CX20 1796 aa5.85□□□□□ -1.47
VPS53YJL029C YRF1-5P0CX21 1796 aa5.85□□□□□ -1.47
VPS53YJL029C YRF1-8P0CX22 1796 aa5.85□□□□□ -1.47
VPS53YJL029C NUP159P40477 1460 aa5.84□□□□□ -1.47
VPS53YJL029C RQC2Q12532 1038 aaKnown RBP5.84□□□□□ -1.47
VPS53YJL029C BNI1P41832 1953 aa5.83□□□□□ -1.48
VPS53YJL029C SNT2P53127 1403 aa5.82□□□□□ -1.48
VPS53YJL029C VPS15P22219 1454 aa5.82□□□□□ -1.48
VPS53YJL029C SNQ2P32568 1501 aaKnown RBP5.81□□□□□ -1.48
VPS53YJL029C REB1P21538 810 aa5.8□□□□□ -1.48
VPS53YJL029C STH1P32597 1359 aa5.78□□□□□ -1.48
VPS53YJL029C MLP2P40457 1679 aa5.78□□□□□ -1.48
VPS53YJL029C PDR12Q02785 1511 aa5.76□□□□□ -1.49
VPS53YJL029C DRS2P39524 1355 aa5.76□□□□□ -1.49
VPS53YJL029C RPL17AP05740 184 aaKnown RBP5.74□□□□□ -1.49
VPS53YJL029C RPL17BP46990 184 aaKnown RBP5.74□□□□□ -1.49
VPS53YJL029C SPO14P36126 1683 aa5.74□□□□□ -1.49
VPS53YJL029C NUP170P38181 1502 aa5.73□□□□□ -1.49
VPS53YJL029C MIF2P35201 549 aa5.71□□□□□ -1.49
VPS53YJL029C MMS1Q06211 1407 aa5.71□□□□□ -1.5
VPS53YJL029C ITT1Q04638 464 aa5.71□□□□□ -1.5
VPS53YJL029C ULS1Q08562 1619 aa5.71□□□□□ -1.5
VPS53YJL029C TRM3Q07527 1436 aa5.7□□□□□ -1.5
VPS53YJL029C IRC20Q06554 1556 aa5.7□□□□□ -1.5
VPS53YJL029C BUD3P25558 1636 aa5.7□□□□□ -1.5
VPS53YJL029C MET10P39692 1035 aa5.7□□□□□ -1.5
VPS53YJL029C GDB1Q06625 1536 aa5.69□□□□□ -1.5
VPS53YJL029C DOP1Q03921 1698 aa5.69□□□□□ -1.5
VPS53YJL029C DNF2Q12675 1612 aa5.68□□□□□ -1.5
VPS53YJL029C TAF7Q05021 590 aa5.67□□□□□ -1.5
VPS53YJL029C AVT3P36062 692 aa5.67□□□□□ -1.5
VPS53YJL029C YGL015CP33199 130 aa5.66□□□□□ -1.5
VPS53YJL029C IQG1Q12280 1495 aa5.66□□□□□ -1.5
VPS53YJL029C PDR15Q04182 1529 aaKnown RBP5.66□□□□□ -1.5
VPS53YJL029C RTT106P40161 455 aa5.64□□□□□ -1.51
VPS53YJL029C CAT8P39113 1433 aa5.62□□□□□ -1.51
VPS53YJL029C PDR10P51533 1564 aa5.61□□□□□ -1.51
VPS53YJL029C CHC1P22137 1653 aaKnown RBP5.61□□□□□ -1.51
VPS53YJL029C NUP157P40064 1391 aaKnown RBP5.6□□□□□ -1.51
VPS53YJL029C ABP1P15891 592 aaKnown RBP5.59□□□□□ -1.51
VPS53YJL029C YBT1P32386 1661 aa5.57□□□□□ -1.52
VPS53YJL029C ARO1P08566 1588 aaKnown RBP5.56□□□□□ -1.52
VPS53YJL029C YOR093CQ12275 1648 aa5.56□□□□□ -1.52
VPS53YJL029C SEC7P11075 2009 aaKnown RBP5.55□□□□□ -1.52
VPS53YJL029C GEA1P47102 1408 aaPredicted RBP5.55□□□□□ -1.52
VPS53YJL029C TY3B-GQ99315 1547 aa5.53□□□□□ -1.52
VPS53YJL029C SAS10Q12136 610 aaPredicted RBP5.51□□□□□ -1.53
VPS53YJL029C DNF3Q12674 1656 aa5.49□□□□□ -1.53
VPS53YJL029C HAP1P0CE41 1502 aa5.49□□□□□ -1.53
VPS53YJL029C YSP2Q06681 1438 aa5.49□□□□□ -1.53
VPS53YJL029C YFR006WP43590 535 aa5.47□□□□□ -1.53
VPS53YJL029C IFH1P39520 1085 aa5.46□□□□□ -1.54
VPS53YJL029C BNR1P40450 1375 aa5.45□□□□□ -1.54
VPS53YJL029C URN1Q06525 465 aaKnown RBP5.44□□□□□ -1.54
VPS53YJL029C SRB8P25648 1427 aa5.44□□□□□ -1.54
VPS53YJL029C YAP3P38749 330 aa5.41□□□□□ -1.54
VPS53YJL029C NUP188P52593 1655 aaKnown RBP5.4□□□□□ -1.55
VPS53YJL029C CDC27P38042 758 aa5.38□□□□□ -1.55
VPS53YJL029C CKB1P43639 278 aa5.38□□□□□ -1.55
VPS53YJL029C TY1B-NL2Q99337 1749 aaKnown RBP5.38□□□□□ -1.55
VPS53YJL029C UBP10P53874 792 aaPredicted RBP5.35□□□□□ -1.55
VPS53YJL029C MAK10Q02197 733 aa5.34□□□□□ -1.55
VPS53YJL029C PDR5P33302 1511 aaKnown RBP5.34□□□□□ -1.55
VPS53YJL029C IKI3Q06706 1349 aaKnown RBP5.34□□□□□ -1.55
VPS53YJL029C IML1P47170 1584 aa5.34□□□□□ -1.55
VPS53YJL029C VMR1P38735 1592 aa5.33□□□□□ -1.56
VPS53YJL029C GCN2P15442 1659 aa5.32□□□□□ -1.56
VPS53YJL029C BUD21Q08492 214 aaPredicted RBP5.32□□□□□ -1.56
VPS53YJL029C USO1P25386 1790 aa5.31□□□□□ -1.56
VPS53YJL029C SPT21P35209 758 aa5.3□□□□□ -1.56
VPS53YJL029C IPL1P38991 367 aa5.3□□□□□ -1.56
VPS53YJL029C YKR023WP36119 530 aaKnown RBP5.29□□□□□ -1.56
VPS53YJL029C MAP2P38174 421 aaKnown RBP5.29□□□□□ -1.56
VPS53YJL029C YMR196WQ04336 1088 aa5.29□□□□□ -1.56
VPS53YJL029C HOP09932 586 aa5.28□□□□□ -1.56
VPS53YJL029C TIF4632P39936 914 aaKnown RBP5.23□□□□□ -1.57
VPS53YJL029C TFC8Q12308 588 aa5.23□□□□□ -1.57
VPS53YJL029C DCD1P06773 312 aa5.21□□□□□ -1.57
VPS53YJL029C SSM4P40318 1319 aa5.21□□□□□ -1.58
VPS53YJL029C TYS1P36421 394 aaKnown RBP5.21□□□□□ -1.58
VPS53YJL029C SCY1P53009 804 aa5.2□□□□□ -1.58
VPS53YJL029C BUD31P25337 157 aaPredicted RBP5.19□□□□□ -1.58
VPS53YJL029C CFT1Q06632 1357 aaKnown RBP5.19□□□□□ -1.58
VPS53YJL029C NUP192P47054 1683 aa5.19□□□□□ -1.58
VPS53YJL029C RAV1P47104 1357 aa5.18□□□□□ -1.58
VPS53YJL029C SLX5P32828 619 aaKnown RBP5.18□□□□□ -1.58
VPS53YJL029C BCK1Q01389 1478 aa5.18□□□□□ -1.58
VPS53YJL029C PDR11P40550 1411 aa5.17□□□□□ -1.58
Retrieved 100 of 5,963 RNA–protein pairs in 12.2 ms