RNA–Protein interactions for RNA: YHL030W

ECM29, Transcript of Scaffold protein, yeastyeast

Gene ECM29, Length 5,607 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ECM29YHL030W TPM2P40414 161 aa3.29□□□□□ -1.88
ECM29YHL030W REV3P14284 1504 aa3.29□□□□□ -1.88
ECM29YHL030W MFT1P33441 392 aaKnown RBP3.28□□□□□ -1.88
ECM29YHL030W CHD1P32657 1468 aa3.28□□□□□ -1.88
ECM29YHL030W GEA1P47102 1408 aaPredicted RBP3.28□□□□□ -1.88
ECM29YHL030W ARL1P38116 183 aaKnown RBP3.28□□□□□ -1.88
ECM29YHL030W PUF6Q04373 656 aaKnown RBP3.28□□□□□ -1.88
ECM29YHL030W TSC11P40061 1430 aa3.28□□□□□ -1.88
ECM29YHL030W DJP1P40564 432 aa3.28□□□□□ -1.88
ECM29YHL030W PEX14P53112 341 aa3.28□□□□□ -1.88
ECM29YHL030W ITC1P53125 1264 aa3.28□□□□□ -1.88
ECM29YHL030W TRM732Q03496 1420 aa3.28□□□□□ -1.88
ECM29YHL030W MDG1P53885 366 aa3.28□□□□□ -1.89
ECM29YHL030W TAF8Q03750 510 aa3.28□□□□□ -1.89
ECM29YHL030W ARP5P53946 755 aa3.27□□□□□ -1.89
ECM29YHL030W ETT1Q08421 412 aaKnown RBP3.27□□□□□ -1.89
ECM29YHL030W RVB2Q12464 471 aaKnown RBP3.27□□□□□ -1.89
ECM29YHL030W RLF2Q12495 606 aa3.27□□□□□ -1.89
ECM29YHL030W NCB2Q92317 146 aa3.27□□□□□ -1.89
ECM29YHL030W TPD3P31383 635 aa3.27□□□□□ -1.89
ECM29YHL030W NMD2P38798 1089 aaKnown RBP3.27□□□□□ -1.89
ECM29YHL030W RIX1P38883 763 aaPredicted RBP3.26□□□□□ -1.89
ECM29YHL030W MPP10P47083 593 aaKnown RBP3.26□□□□□ -1.89
ECM29YHL030W TCB2P48231 1178 aa3.26□□□□□ -1.89
ECM29YHL030W PDI1P17967 522 aaKnown RBP3.26□□□□□ -1.89
ECM29YHL030W RFC1P38630 861 aaKnown RBP3.26□□□□□ -1.89
ECM29YHL030W YPP1P46951 817 aa3.26□□□□□ -1.89
ECM29YHL030W YBR287WP38355 427 aa3.26□□□□□ -1.89
ECM29YHL030W ENP2P48234 707 aaKnown RBP3.26□□□□□ -1.89
ECM29YHL030W SUP35P05453 685 aaKnown RBP3.25□□□□□ -1.89
ECM29YHL030W CSE4P36012 229 aa3.25□□□□□ -1.89
ECM29YHL030W SPB4P25808 606 aaPredicted RBP3.25□□□□□ -1.89
ECM29YHL030W FPR4Q06205 392 aaPredicted RBP3.25□□□□□ -1.89
ECM29YHL030W RTG3P38165 486 aa3.25□□□□□ -1.89
ECM29YHL030W RSM25P40496 264 aa3.25□□□□□ -1.89
ECM29YHL030W HIR3P47171 1648 aa3.25□□□□□ -1.89
ECM29YHL030W SNF7P39929 240 aaKnown RBP3.24□□□□□ -1.89
ECM29YHL030W SRB8P25648 1427 aa3.24□□□□□ -1.89
ECM29YHL030W BIK1P11709 440 aa3.24□□□□□ -1.89
ECM29YHL030W VAS1P07806 1104 aaKnown RBP3.24□□□□□ -1.89
ECM29YHL030W SLD2P34252 453 aa3.24□□□□□ -1.89
ECM29YHL030W IOC4Q04213 475 aa3.24□□□□□ -1.89
ECM29YHL030W THO2P53552 1597 aaKnown RBP3.24□□□□□ -1.89
ECM29YHL030W MDS3P53094 1487 aa3.24□□□□□ -1.89
ECM29YHL030W CBF5P33322 483 aaKnown RBP RIP-Chip data3.23□□□□□ -1.89not detected
ECM29YHL030W UFD4P33202 1483 aa3.23□□□□□ -1.89
ECM29YHL030W SCC2Q04002 1493 aa3.23□□□□□ -1.89
ECM29YHL030W ESF1Q06344 628 aaKnown RBP3.23□□□□□ -1.89
ECM29YHL030W GIN4Q12263 1142 aa3.23□□□□□ -1.89
ECM29YHL030W MYO4P32492 1471 aa3.23□□□□□ -1.89
ECM29YHL030W TCD1P38756 429 aa3.22□□□□□ -1.89
ECM29YHL030W YNG2P38806 282 aaKnown RBP3.22□□□□□ -1.89
ECM29YHL030W VPS60Q03390 229 aa3.22□□□□□ -1.89
ECM29YHL030W POL1P13382 1468 aa3.22□□□□□ -1.89
ECM29YHL030W MMS1Q06211 1407 aa3.22□□□□□ -1.89
ECM29YHL030W PKH1Q03407 766 aa3.22□□□□□ -1.89
ECM29YHL030W SFI1Q12369 946 aa3.22□□□□□ -1.89
ECM29YHL030W RNR2P09938 399 aaKnown RBP3.22□□□□□ -1.89
ECM29YHL030W ABP1P15891 592 aaKnown RBP3.21□□□□□ -1.89
ECM29YHL030W CLB1P24868 471 aa3.21□□□□□ -1.89
ECM29YHL030W ZDS1P50111 915 aaKnown RBP3.21□□□□□ -1.89
ECM29YHL030W RIA1P53893 1110 aa3.21□□□□□ -1.89
ECM29YHL030W GRX4P32642 244 aa3.21□□□□□ -1.9
ECM29YHL030W LCD1Q04377 747 aa3.21□□□□□ -1.9
ECM29YHL030W ISW2Q08773 1120 aa3.21□□□□□ -1.9
ECM29YHL030W NUP157P40064 1391 aaKnown RBP3.21□□□□□ -1.9
ECM29YHL030W BNR1P40450 1375 aa3.21□□□□□ -1.9
ECM29YHL030W SRS2P12954 1174 aa3.21□□□□□ -1.9
ECM29YHL030W OSW7P43611 510 aa3.21□□□□□ -1.9
ECM29YHL030W NSE3Q05541 303 aa3.21□□□□□ -1.9
ECM29YHL030W CFT1Q06632 1357 aaKnown RBP3.21□□□□□ -1.9
ECM29YHL030W ROX1P25042 368 aa3.21□□□□□ -1.9
ECM29YHL030W GAS4Q08271 471 aa3.21□□□□□ -1.9
ECM29YHL030W TOP2P06786 1428 aaKnown RBP3.2□□□□□ -1.9
ECM29YHL030W RAD50P12753 1312 aa3.2□□□□□ -1.9
ECM29YHL030W RSC1P53236 928 aa3.2□□□□□ -1.9
ECM29YHL030W SSA2P10592 639 aaKnown RBP3.2□□□□□ -1.9
ECM29YHL030W RRP8P38961 392 aaKnown RBP3.2□□□□□ -1.9
ECM29YHL030W CAJ1P39101 391 aa3.2□□□□□ -1.9
ECM29YHL030W DNA2P38859 1522 aa3.2□□□□□ -1.9
ECM29YHL030W DPS1P04802 557 aaKnown RBP3.2□□□□□ -1.9
ECM29YHL030W SES1P07284 462 aaKnown RBP3.2□□□□□ -1.9
ECM29YHL030W DEP1P31385 405 aa3.2□□□□□ -1.9
ECM29YHL030W RRT14P40470 206 aa3.2□□□□□ -1.9
ECM29YHL030W MGA2P40578 1113 aa3.2□□□□□ -1.9
ECM29YHL030W CAB1Q04430 367 aa3.2□□□□□ -1.9
ECM29YHL030W SGD1Q06132 899 aa3.2□□□□□ -1.9
ECM29YHL030W RKR1Q04781 1562 aa3.19□□□□□ -1.9
ECM29YHL030W LEU2P04173 364 aaPredicted RBP3.19□□□□□ -1.9
ECM29YHL030W PCT1P13259 424 aa3.19□□□□□ -1.9
ECM29YHL030W KRE33P53914 1056 aaKnown RBP3.19□□□□□ -1.9
ECM29YHL030W SAP155P43612 1002 aa3.19□□□□□ -1.9
ECM29YHL030W BTN2P53286 410 aa3.19□□□□□ -1.9
ECM29YHL030W RUD3Q12234 484 aaKnown RBP3.19□□□□□ -1.9
ECM29YHL030W SNQ2P32568 1501 aaKnown RBP3.19□□□□□ -1.9
ECM29YHL030W KOG1P38873 1557 aa3.19□□□□□ -1.9
ECM29YHL030W BUB1P41695 1021 aaKnown RBP RIP-Chip data3.19□□□□□ -1.9not detected
ECM29YHL030W GYP7P48365 746 aa3.19□□□□□ -1.9
ECM29YHL030W NBL1Q3E7Y6 73 aa3.19□□□□□ -1.9
ECM29YHL030W TAF13P11747 167 aa3.19□□□□□ -1.9
Retrieved 100 of 5,963 RNA–protein pairs in 13 ms