RNA–Protein interactions for RNA: YGR140W

CBF2, Transcript of Essential kinetochore protein, yeastyeast

Gene CBF2, Length 2,871 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CBF2YGR140W CDC27P38042 758 aa3.37□□□□□ -1.87
CBF2YGR140W KIC1P38692 1080 aa3.37□□□□□ -1.87
CBF2YGR140W COX6P00427 148 aa3.36□□□□□ -1.87
CBF2YGR140W MET10P39692 1035 aa3.36□□□□□ -1.87
CBF2YGR140W BIM1P40013 344 aa3.36□□□□□ -1.87
CBF2YGR140W CSN12P47130 423 aa3.36□□□□□ -1.87
CBF2YGR140W ORC1P54784 914 aaPredicted RBP3.36□□□□□ -1.87
CBF2YGR140W PKC1P24583 1151 aa3.35□□□□□ -1.87
CBF2YGR140W CDC3P32457 520 aaKnown RBP3.35□□□□□ -1.87
CBF2YGR140W BDF1P35817 686 aa3.35□□□□□ -1.87
CBF2YGR140W YBL036CP38197 257 aa3.34□□□□□ -1.87
CBF2YGR140W IOC4Q04213 475 aa3.34□□□□□ -1.87
CBF2YGR140W ATG32P40458 529 aa3.33□□□□□ -1.88
CBF2YGR140W YPR204WQ08995 1032 aa3.33□□□□□ -1.88
CBF2YGR140W UBP14P38237 781 aaKnown RBP3.33□□□□□ -1.88
CBF2YGR140W YMR1P47147 688 aaKnown RBP RIP-Chip data3.33□□□□□ -1.88not detected
CBF2YGR140W CPS1P27614 576 aa3.33□□□□□ -1.88
CBF2YGR140W VHR2P40041 505 aa3.32□□□□□ -1.88
CBF2YGR140W SCY1P53009 804 aa3.32□□□□□ -1.88
CBF2YGR140W EDS1P38073 919 aa3.32□□□□□ -1.88
CBF2YGR140W VPS29P38759 282 aa3.32□□□□□ -1.88
CBF2YGR140W MRX12P47084 519 aa3.31□□□□□ -1.88
CBF2YGR140W TIF1P10081 395 aaKnown RBP3.3□□□□□ -1.88
CBF2YGR140W PTC3P34221 468 aaKnown RBP3.3□□□□□ -1.88
CBF2YGR140W YFR006WP43590 535 aa3.3□□□□□ -1.88
CBF2YGR140W DBP1P24784 617 aaKnown RBP3.3□□□□□ -1.88
CBF2YGR140W HEM3P28789 327 aa3.3□□□□□ -1.88
CBF2YGR140W GLN1P32288 370 aaKnown RBP3.3□□□□□ -1.88
CBF2YGR140W PSE1P32337 1089 aaKnown RBP3.3□□□□□ -1.88
CBF2YGR140W RTG2P32608 588 aaKnown RBP3.3□□□□□ -1.88
CBF2YGR140W YMR196WQ04336 1088 aa3.3□□□□□ -1.88
CBF2YGR140W ERG12P07277 443 aa3.29□□□□□ -1.88
CBF2YGR140W ASF1P32447 279 aa3.29□□□□□ -1.88
CBF2YGR140W RAD54P32863 898 aa3.29□□□□□ -1.88
CBF2YGR140W TEA1P47988 759 aa3.29□□□□□ -1.88
CBF2YGR140W SSF1P38789 453 aaPredicted RBP3.29□□□□□ -1.88
CBF2YGR140W ATH1P48016 1211 aa3.29□□□□□ -1.88
CBF2YGR140W ITT1Q04638 464 aa3.29□□□□□ -1.88
CBF2YGR140W RRN6P32786 894 aa3.28□□□□□ -1.88
CBF2YGR140W TTI1P36097 1038 aa3.28□□□□□ -1.88
CBF2YGR140W STS1P38637 319 aa3.28□□□□□ -1.88
CBF2YGR140W HAT1Q12341 374 aa3.28□□□□□ -1.88
CBF2YGR140W SIS2P36024 562 aa3.27□□□□□ -1.89
CBF2YGR140W CLB5P30283 435 aa3.27□□□□□ -1.89
CBF2YGR140W YOR238WQ08634 303 aa3.26□□□□□ -1.89
CBF2YGR140W YNL108CP53929 270 aa3.26□□□□□ -1.89
CBF2YGR140W TYW1Q08960 810 aaKnown RBP3.26□□□□□ -1.89
CBF2YGR140W BIO2P32451 375 aa3.26□□□□□ -1.89
CBF2YGR140W STM1P39015 273 aaKnown RBP3.26□□□□□ -1.89
CBF2YGR140W PKH3Q03306 898 aaPredicted RBP3.26□□□□□ -1.89
CBF2YGR140W GRE2Q12068 342 aaKnown RBP3.26□□□□□ -1.89
CBF2YGR140W SEC20P28791 383 aa3.25□□□□□ -1.89
CBF2YGR140W CSE4P36012 229 aa3.25□□□□□ -1.89
CBF2YGR140W BRN1P38170 754 aa3.25□□□□□ -1.89
CBF2YGR140W PAM1P37304 830 aaKnown RBP3.25□□□□□ -1.89
CBF2YGR140W YDR090CQ03193 310 aa3.25□□□□□ -1.89
CBF2YGR140W YTA7P40340 1379 aa3.24□□□□□ -1.89
CBF2YGR140W SLX5P32828 619 aaKnown RBP3.24□□□□□ -1.89
CBF2YGR140W YLR326WQ06170 240 aaKnown RBP3.24□□□□□ -1.89
CBF2YGR140W RPP1BP10622 106 aaKnown RBP3.24□□□□□ -1.89
CBF2YGR140W NOB1Q08444 459 aaKnown RBP3.24□□□□□ -1.89
CBF2YGR140W ARG8P18544 423 aa3.23□□□□□ -1.89
CBF2YGR140W RAD59Q12223 238 aa3.23□□□□□ -1.89
CBF2YGR140W MMP1Q12372 583 aa3.23□□□□□ -1.89
CBF2YGR140W KTR1P27810 393 aaKnown RBP3.23□□□□□ -1.89
CBF2YGR140W GUT1P32190 709 aa3.23□□□□□ -1.89
CBF2YGR140W SPT5P27692 1063 aaKnown RBP3.22□□□□□ -1.89
CBF2YGR140W YML083CQ04526 418 aa3.22□□□□□ -1.89
CBF2YGR140W SEN54Q02825 467 aaPredicted RBP3.22□□□□□ -1.89
CBF2YGR140W UBP10P53874 792 aaPredicted RBP3.22□□□□□ -1.89
CBF2YGR140W KEX1P09620 729 aa3.21□□□□□ -1.9
CBF2YGR140W PUP1P25043 261 aa3.21□□□□□ -1.9
CBF2YGR140W MAP2P38174 421 aaKnown RBP3.21□□□□□ -1.9
CBF2YGR140W PIB1Q06651 286 aa3.21□□□□□ -1.9
CBF2YGR140W ENO1P00924 437 aaKnown RBP3.21□□□□□ -1.9
CBF2YGR140W ESS1P22696 170 aa3.21□□□□□ -1.9
CBF2YGR140W THI12P42883 340 aa3.21□□□□□ -1.9
CBF2YGR140W THI5P43534 340 aa3.21□□□□□ -1.9
CBF2YGR140W YPP1P46951 817 aa3.21□□□□□ -1.9
CBF2YGR140W THI11P47183 340 aa3.21□□□□□ -1.9
CBF2YGR140W YGR273CP53329 174 aa3.21□□□□□ -1.9
CBF2YGR140W HST2P53686 357 aa3.21□□□□□ -1.9
CBF2YGR140W FPR4Q06205 392 aaPredicted RBP3.21□□□□□ -1.9
CBF2YGR140W THI13Q07748 340 aa3.21□□□□□ -1.9
CBF2YGR140W YBL113CQ7M4S9 792 aa3.21□□□□□ -1.9
CBF2YGR140W NNF1P47149 201 aa3.2□□□□□ -1.9
CBF2YGR140W TGL4P36165 910 aa3.2□□□□□ -1.9
CBF2YGR140W ORC6P38826 435 aa3.2□□□□□ -1.9
CBF2YGR140W KTR7P40504 517 aa3.2□□□□□ -1.9
CBF2YGR140W VMA1P17255 1071 aaKnown RBP3.19□□□□□ -1.9
CBF2YGR140W PCS60P38137 543 aaKnown RBP RIP-Chip data3.19□□□□□ -1.9 RIP-Chip
CBF2YGR140W FPK1P53739 893 aa3.19□□□□□ -1.9
CBF2YGR140W SVF1Q05515 481 aa3.19□□□□□ -1.9
CBF2YGR140W ENO2P00925 437 aaKnown RBP3.19□□□□□ -1.9
CBF2YGR140W TOP1P04786 769 aa3.19□□□□□ -1.9
CBF2YGR140W IPL1P38991 367 aa3.19□□□□□ -1.9
CBF2YGR140W PEX21P50091 288 aa3.18□□□□□ -1.9
CBF2YGR140W KAR5Q04746 504 aa3.18□□□□□ -1.9
CBF2YGR140W SUP45P12385 437 aaKnown RBP3.18□□□□□ -1.9
CBF2YGR140W POL32P47110 350 aa3.18□□□□□ -1.9
Retrieved 100 of 5,963 RNA–protein pairs in 12.1 ms