RNA–Protein interactions for RNA: YFL044C

OTU1, Transcript of Deubiquitylation enzyme that binds to the chaperone-ATPase Cdc48p, yeastyeast

Gene OTU1, Length 906 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
OTU1YFL044C TY2B-OR1Q12113 1770 aa6.69□□□□□ -1.34
OTU1YFL044C TY2B-DR1Q12472 1770 aa6.69□□□□□ -1.34
OTU1YFL044C TY2B-OR2Q12501 1770 aa6.69□□□□□ -1.34
OTU1YFL044C RPO31P04051 1460 aa6.68□□□□□ -1.34
OTU1YFL044C TY1B-BRQ12193 1756 aa6.68□□□□□ -1.34
OTU1YFL044C TY1B-GR3Q12316 1755 aa6.68□□□□□ -1.34
OTU1YFL044C TY1B-ORQ92393 1755 aa6.68□□□□□ -1.34
OTU1YFL044C IRC20Q06554 1556 aa6.68□□□□□ -1.34
OTU1YFL044C CHD1P32657 1468 aa6.67□□□□□ -1.34
OTU1YFL044C BUD31P25337 157 aaPredicted RBP6.66□□□□□ -1.34
OTU1YFL044C MMS1Q06211 1407 aa6.65□□□□□ -1.35
OTU1YFL044C RKR1Q04781 1562 aa6.65□□□□□ -1.35
OTU1YFL044C GEA2P39993 1459 aaKnown RBP6.63□□□□□ -1.35
OTU1YFL044C PSD2P53037 1138 aaKnown RBP6.63□□□□□ -1.35
OTU1YFL044C TY1B-HO13535 1793 aa6.62□□□□□ -1.35
OTU1YFL044C TY1B-DR5P0C2I2 1755 aa6.62□□□□□ -1.35
OTU1YFL044C TY1B-DR6P0C2I3 1755 aa6.62□□□□□ -1.35
OTU1YFL044C TY1B-LR2P0C2I5 1755 aa6.62□□□□□ -1.35
OTU1YFL044C TY1B-LR3P0C2I6 1755 aaKnown RBP6.62□□□□□ -1.35
OTU1YFL044C TY1B-PR1P0C2I9 1755 aaKnown RBP6.62□□□□□ -1.35
OTU1YFL044C TY1B-PR2P0C2J0 1756 aa6.62□□□□□ -1.35
OTU1YFL044C TY1B-PR3P0C2J1 1755 aaKnown RBP6.62□□□□□ -1.35
OTU1YFL044C TY1B-JR1P47098 1755 aa6.62□□□□□ -1.35
OTU1YFL044C TY1B-ML2Q03434 1755 aaKnown RBP6.62□□□□□ -1.35
OTU1YFL044C TY1B-ER1Q03612 1755 aa6.62□□□□□ -1.35
OTU1YFL044C TY1B-ML1Q04711 1755 aaKnown RBP6.62□□□□□ -1.35
OTU1YFL044C TY1B-GR2Q12269 1755 aa6.62□□□□□ -1.35
OTU1YFL044C TY1B-OLQ12273 1755 aa6.62□□□□□ -1.35
OTU1YFL044C TY1B-PLQ12414 1755 aaKnown RBP6.62□□□□□ -1.35
OTU1YFL044C CST9Q06032 482 aa6.61□□□□□ -1.35
OTU1YFL044C PAN1P32521 1480 aa6.6□□□□□ -1.35
OTU1YFL044C TY2B-BQ12491 1770 aa6.6□□□□□ -1.35
OTU1YFL044C MRM1P25270 412 aa6.6□□□□□ -1.35
OTU1YFL044C TY1B-DR3Q99231 1755 aa6.58□□□□□ -1.36
OTU1YFL044C UBP9P39967 754 aa6.56□□□□□ -1.36
OTU1YFL044C PIB1Q06651 286 aa6.56□□□□□ -1.36
OTU1YFL044C TOP2P06786 1428 aaKnown RBP6.56□□□□□ -1.36
OTU1YFL044C YRF1-1P0CX20 1796 aa6.55□□□□□ -1.36
OTU1YFL044C YRF1-5P0CX21 1796 aa6.55□□□□□ -1.36
OTU1YFL044C YRF1-8P0CX22 1796 aa6.55□□□□□ -1.36
OTU1YFL044C YOR238WQ08634 303 aa6.54□□□□□ -1.36
OTU1YFL044C DNF2Q12675 1612 aa6.52□□□□□ -1.37
OTU1YFL044C MMS22Q06164 1454 aa6.5□□□□□ -1.37
OTU1YFL044C YAP5P40574 245 aa6.5□□□□□ -1.37
OTU1YFL044C YBL029C-AQ3E756 94 aa6.49□□□□□ -1.37
OTU1YFL044C DRS2P39524 1355 aa6.48□□□□□ -1.37
OTU1YFL044C WSC3Q12215 556 aa6.48□□□□□ -1.37
OTU1YFL044C POL1P13382 1468 aa6.47□□□□□ -1.37
OTU1YFL044C TY1B-JR2P47100 1755 aaKnown RBP6.47□□□□□ -1.37
OTU1YFL044C TY1B-ER2Q03619 1755 aa6.47□□□□□ -1.37
OTU1YFL044C TY1B-MR1Q04214 1755 aa6.47□□□□□ -1.37
OTU1YFL044C TY1B-MR2Q04670 1755 aaKnown RBP6.47□□□□□ -1.37
OTU1YFL044C TY1B-LR1Q12088 1755 aaKnown RBP6.47□□□□□ -1.37
OTU1YFL044C TY1B-NL1Q12112 1755 aa6.47□□□□□ -1.37
OTU1YFL044C TY1B-GR1Q12141 1755 aa6.47□□□□□ -1.37
OTU1YFL044C TY1B-BLQ12490 1755 aa6.47□□□□□ -1.37
OTU1YFL044C SIS1P25294 352 aaKnown RBP6.47□□□□□ -1.37
OTU1YFL044C TRM732Q03496 1420 aa6.47□□□□□ -1.37
OTU1YFL044C SMC4Q12267 1418 aa6.43□□□□□ -1.38
OTU1YFL044C NTE1Q04958 1679 aa6.43□□□□□ -1.38
OTU1YFL044C MST1P07236 462 aa6.43□□□□□ -1.38
OTU1YFL044C VPS15P22219 1454 aa6.42□□□□□ -1.38
OTU1YFL044C NUP159P40477 1460 aa6.42□□□□□ -1.38
OTU1YFL044C YOR1P53049 1477 aa6.42□□□□□ -1.38
OTU1YFL044C RTG3P38165 486 aa6.42□□□□□ -1.38
OTU1YFL044C RCR1P38212 213 aa6.42□□□□□ -1.38
OTU1YFL044C GTT3P39996 337 aa6.42□□□□□ -1.38
OTU1YFL044C TAF7Q05021 590 aa6.42□□□□□ -1.38
OTU1YFL044C YOR093CQ12275 1648 aa6.42□□□□□ -1.38
OTU1YFL044C RPO21P04050 1733 aaKnown RBP6.42□□□□□ -1.38
OTU1YFL044C SPP41P38904 1435 aa6.41□□□□□ -1.38
OTU1YFL044C RAM2P29703 316 aa6.38□□□□□ -1.39
OTU1YFL044C STU1P38198 1513 aa6.37□□□□□ -1.39
OTU1YFL044C VTH1P40438 1549 aa6.37□□□□□ -1.39
OTU1YFL044C VTH2P40890 1549 aa6.37□□□□□ -1.39
OTU1YFL044C TSC11P40061 1430 aa6.37□□□□□ -1.39
OTU1YFL044C NSR1P27476 414 aaKnown RBP RIP-Chip data6.37□□□□□ -1.39not detected
OTU1YFL044C DBP1P24784 617 aaKnown RBP6.36□□□□□ -1.39
OTU1YFL044C VPS29P38759 282 aa6.36□□□□□ -1.39
OTU1YFL044C VNX1P42839 908 aa6.36□□□□□ -1.39
OTU1YFL044C SPP1Q03012 353 aa6.35□□□□□ -1.39
OTU1YFL044C YMR1P47147 688 aaKnown RBP RIP-Chip data6.34□□□□□ -1.39not detected
OTU1YFL044C MYO4P32492 1471 aa6.34□□□□□ -1.4
OTU1YFL044C STS1P38637 319 aa6.32□□□□□ -1.4
OTU1YFL044C SNT2P53127 1403 aa6.31□□□□□ -1.4
OTU1YFL044C SPO14P36126 1683 aa6.3□□□□□ -1.4
OTU1YFL044C DOP1Q03921 1698 aa6.3□□□□□ -1.4
OTU1YFL044C MAK11P20484 414 aaKnown RBP6.3□□□□□ -1.4
OTU1YFL044C SAS10Q12136 610 aaPredicted RBP6.3□□□□□ -1.4
OTU1YFL044C NUP170P38181 1502 aa6.3□□□□□ -1.4
OTU1YFL044C SET1P38827 1080 aaKnown RBP6.28□□□□□ -1.4
OTU1YFL044C SNQ2P32568 1501 aaKnown RBP6.28□□□□□ -1.4
OTU1YFL044C SET4P42948 560 aa6.27□□□□□ -1.41
OTU1YFL044C PDR12Q02785 1511 aa6.25□□□□□ -1.41
OTU1YFL044C ULS1Q08562 1619 aa6.25□□□□□ -1.41
OTU1YFL044C LEO1P38439 464 aa6.24□□□□□ -1.41
OTU1YFL044C TIF11P38912 153 aaKnown RBP6.24□□□□□ -1.41
OTU1YFL044C YTA7P40340 1379 aa6.23□□□□□ -1.41
OTU1YFL044C VMA1P17255 1071 aaKnown RBP6.23□□□□□ -1.41
OTU1YFL044C MET10P39692 1035 aa6.23□□□□□ -1.41
Retrieved 100 of 5,963 RNA–protein pairs in 14.7 ms