RNA–Protein interactions for RNA: YFL004W

VTC2, Transcript of Subunit of vacuolar transporter chaperone (VTC) complex, yeastyeast

Gene VTC2, Length 2,487 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VTC2YFL004W PSD2P53037 1138 aaKnown RBP6.9□□□□□ -1.3
VTC2YFL004W RKR1Q04781 1562 aa6.9□□□□□ -1.3
VTC2YFL004W IRC20Q06554 1556 aa6.89□□□□□ -1.31
VTC2YFL004W YPK9Q12697 1472 aa6.88□□□□□ -1.31
VTC2YFL004W SNF7P39929 240 aaKnown RBP6.88□□□□□ -1.31
VTC2YFL004W GEA1P47102 1408 aaPredicted RBP6.88□□□□□ -1.31
VTC2YFL004W QCR6P00127 147 aa6.88□□□□□ -1.31
VTC2YFL004W AIM44Q99299 758 aa6.87□□□□□ -1.31
VTC2YFL004W PDR15Q04182 1529 aaKnown RBP6.86□□□□□ -1.31
VTC2YFL004W MHP1P43638 1398 aa6.85□□□□□ -1.31
VTC2YFL004W NUP159P40477 1460 aa6.84□□□□□ -1.31
VTC2YFL004W MMS1Q06211 1407 aa6.83□□□□□ -1.32
VTC2YFL004W ARP8Q12386 881 aaKnown RBP RIP-Chip data6.83□□□□□ -1.32not detected
VTC2YFL004W FPR3P38911 411 aaKnown RBP6.82□□□□□ -1.32
VTC2YFL004W IFH1P39520 1085 aa6.82□□□□□ -1.32
VTC2YFL004W FUN12P39730 1002 aaKnown RBP6.82□□□□□ -1.32
VTC2YFL004W ROX1P25042 368 aa6.81□□□□□ -1.32
VTC2YFL004W OXP1P28273 1286 aa6.81□□□□□ -1.32
VTC2YFL004W YGR130CP53278 816 aa6.8□□□□□ -1.32
VTC2YFL004W YIR014WP40570 242 aa6.79□□□□□ -1.32
VTC2YFL004W YAH1Q12184 172 aaKnown RBP6.79□□□□□ -1.32
VTC2YFL004W ULS1Q08562 1619 aa6.79□□□□□ -1.32
VTC2YFL004W RPS0BP46654 252 aaKnown RBP6.79□□□□□ -1.32
VTC2YFL004W TY3B-GQ99315 1547 aa6.79□□□□□ -1.32
VTC2YFL004W GCN2P15442 1659 aa6.78□□□□□ -1.32
VTC2YFL004W ESC1Q03661 1658 aaKnown RBP6.78□□□□□ -1.32
VTC2YFL004W PAF1P38351 445 aa6.78□□□□□ -1.32
VTC2YFL004W DNF1P32660 1571 aa6.78□□□□□ -1.32
VTC2YFL004W TSR3Q12094 313 aaKnown RBP6.77□□□□□ -1.32
VTC2YFL004W RLF2Q12495 606 aa6.77□□□□□ -1.32
VTC2YFL004W VPS15P22219 1454 aa6.76□□□□□ -1.33
VTC2YFL004W YIL055CP40523 627 aaKnown RBP6.76□□□□□ -1.33
VTC2YFL004W ABP1P15891 592 aaKnown RBP6.75□□□□□ -1.33
VTC2YFL004W SLN1P39928 1220 aaPredicted RBP6.75□□□□□ -1.33
VTC2YFL004W CWC22P53333 577 aaKnown RBP6.75□□□□□ -1.33
VTC2YFL004W ATG2P53855 1592 aa6.75□□□□□ -1.33
VTC2YFL004W NOP53Q12080 455 aaKnown RBP6.74□□□□□ -1.33
VTC2YFL004W RPO31P04051 1460 aa6.72□□□□□ -1.33
VTC2YFL004W CTR9P89105 1077 aa6.71□□□□□ -1.33
VTC2YFL004W DJP1P40564 432 aa6.71□□□□□ -1.34
VTC2YFL004W EDE1P34216 1381 aa6.71□□□□□ -1.34
VTC2YFL004W PDR5P33302 1511 aaKnown RBP6.71□□□□□ -1.34
VTC2YFL004W TY1B-DR3Q99231 1755 aa6.7□□□□□ -1.34
VTC2YFL004W PCT1P13259 424 aa6.7□□□□□ -1.34
VTC2YFL004W YKR023WP36119 530 aaKnown RBP6.7□□□□□ -1.34
VTC2YFL004W YLR271WQ06152 274 aa6.7□□□□□ -1.34
VTC2YFL004W NOP58Q12499 511 aaKnown RBP6.69□□□□□ -1.34
VTC2YFL004W YBT1P32386 1661 aa6.69□□□□□ -1.34
VTC2YFL004W CDC45Q08032 650 aa6.69□□□□□ -1.34
VTC2YFL004W NOT3P06102 836 aaKnown RBP6.68□□□□□ -1.34
VTC2YFL004W NAP1P25293 417 aaKnown RBP6.68□□□□□ -1.34
VTC2YFL004W GEA2P39993 1459 aaKnown RBP6.68□□□□□ -1.34
VTC2YFL004W NUG1P40010 520 aaKnown RBP6.67□□□□□ -1.34
VTC2YFL004W ORC1P54784 914 aaPredicted RBP6.67□□□□□ -1.34
VTC2YFL004W RVB2Q12464 471 aaKnown RBP6.67□□□□□ -1.34
VTC2YFL004W RPP0P05317 312 aaKnown RBP6.67□□□□□ -1.34
VTC2YFL004W VPS27P40343 622 aaKnown RBP6.67□□□□□ -1.34
VTC2YFL004W NOP7P53261 605 aaKnown RBP6.67□□□□□ -1.34
VTC2YFL004W NST1P53935 1240 aa6.67□□□□□ -1.34
VTC2YFL004W PDS5Q04264 1277 aa6.66□□□□□ -1.34
VTC2YFL004W MGA2P40578 1113 aa6.66□□□□□ -1.34
VTC2YFL004W MSP1P28737 362 aa6.65□□□□□ -1.34
VTC2YFL004W YPP1P46951 817 aa6.65□□□□□ -1.34
VTC2YFL004W GDB1Q06625 1536 aa6.65□□□□□ -1.34
VTC2YFL004W TY2B-LR1P0C2J3 1770 aa6.65□□□□□ -1.34
VTC2YFL004W TY2B-FP0CX63 1770 aa6.65□□□□□ -1.34
VTC2YFL004W TY2B-GR2P0CX64 1770 aa6.65□□□□□ -1.34
VTC2YFL004W TY2B-CP25384 1770 aa6.65□□□□□ -1.34
VTC2YFL004W TY2B-DR2Q03494 1770 aa6.65□□□□□ -1.34
VTC2YFL004W TY1B-DR1Q03855 1755 aa6.65□□□□□ -1.34
VTC2YFL004W TY2B-DR3Q07791 1770 aaKnown RBP6.65□□□□□ -1.34
VTC2YFL004W TY2B-OR1Q12113 1770 aa6.65□□□□□ -1.34
VTC2YFL004W TY2B-DR1Q12472 1770 aa6.65□□□□□ -1.34
VTC2YFL004W TY2B-OR2Q12501 1770 aa6.65□□□□□ -1.34
VTC2YFL004W VPS24P36095 224 aaKnown RBP6.65□□□□□ -1.35
VTC2YFL004W RNA1P11745 407 aaKnown RBP6.64□□□□□ -1.35
VTC2YFL004W ENV11P53246 860 aa6.64□□□□□ -1.35
VTC2YFL004W RIX1P38883 763 aaPredicted RBP6.64□□□□□ -1.35
VTC2YFL004W KIP3P53086 805 aaKnown RBP6.63□□□□□ -1.35
VTC2YFL004W FPR4Q06205 392 aaPredicted RBP6.63□□□□□ -1.35
VTC2YFL004W TY3B-IQ7LHG5 1498 aaKnown RBP6.63□□□□□ -1.35
VTC2YFL004W KNS1P32350 737 aaPredicted RBP6.62□□□□□ -1.35
VTC2YFL004W YRB30P53107 440 aaPredicted RBP6.62□□□□□ -1.35
VTC2YFL004W TRM3Q07527 1436 aa6.62□□□□□ -1.35
VTC2YFL004W MDS3P53094 1487 aa6.62□□□□□ -1.35
VTC2YFL004W NUP157P40064 1391 aaKnown RBP6.62□□□□□ -1.35
VTC2YFL004W TY2B-BQ12491 1770 aa6.62□□□□□ -1.35
VTC2YFL004W ARL1P38116 183 aaKnown RBP6.62□□□□□ -1.35
VTC2YFL004W RSM7P47150 247 aa6.62□□□□□ -1.35
VTC2YFL004W RAD26P40352 1085 aa6.61□□□□□ -1.35
VTC2YFL004W SMC3P47037 1230 aa6.6□□□□□ -1.35
VTC2YFL004W ARO1P08566 1588 aaKnown RBP6.58□□□□□ -1.36
VTC2YFL004W LSP1Q12230 341 aaKnown RBP6.58□□□□□ -1.36
VTC2YFL004W DEF1P35732 738 aaKnown RBP6.57□□□□□ -1.36
VTC2YFL004W DNF2Q12675 1612 aa6.57□□□□□ -1.36
VTC2YFL004W CAT8P39113 1433 aa6.56□□□□□ -1.36
VTC2YFL004W SPC110P32380 944 aa6.56□□□□□ -1.36
VTC2YFL004W SNT2P53127 1403 aa6.56□□□□□ -1.36
VTC2YFL004W TEA1P47988 759 aa6.56□□□□□ -1.36
VTC2YFL004W MRPL32P25348 183 aa6.55□□□□□ -1.36
Retrieved 100 of 5,963 RNA–protein pairs in 16.1 ms