RNA–Protein interactions for RNA: YDR485C

VPS72, Transcript of Htz1p-binding component of the SWR1 complex, yeastyeast

Gene VPS72, Length 2,388 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS72YDR485C RRN6P32786 894 aa8.25□□□□□ -1.09
VPS72YDR485C EPS1P40557 701 aa8.24□□□□□ -1.09
VPS72YDR485C NOB1Q08444 459 aaKnown RBP8.24□□□□□ -1.09
VPS72YDR485C VPS29P38759 282 aa8.23□□□□□ -1.09
VPS72YDR485C NOP53Q12080 455 aaKnown RBP8.23□□□□□ -1.09
VPS72YDR485C SLD2P34252 453 aa8.22□□□□□ -1.09
VPS72YDR485C EDS1P38073 919 aa8.22□□□□□ -1.09
VPS72YDR485C MET10P39692 1035 aa8.22□□□□□ -1.09
VPS72YDR485C CPS1P27614 576 aa8.21□□□□□ -1.09
VPS72YDR485C TIF1P10081 395 aaKnown RBP8.21□□□□□ -1.1
VPS72YDR485C SSF1P38789 453 aaPredicted RBP8.21□□□□□ -1.1
VPS72YDR485C BDF1P35817 686 aa8.18□□□□□ -1.1
VPS72YDR485C TTI1P36097 1038 aa8.17□□□□□ -1.1
VPS72YDR485C CSN12P47130 423 aa8.17□□□□□ -1.1
VPS72YDR485C SSA2P10592 639 aaKnown RBP8.17□□□□□ -1.1
VPS72YDR485C KTR1P27810 393 aaKnown RBP8.17□□□□□ -1.1
VPS72YDR485C YTA7P40340 1379 aa8.16□□□□□ -1.1
VPS72YDR485C HEM3P28789 327 aa8.16□□□□□ -1.1
VPS72YDR485C TOP1P04786 769 aa8.15□□□□□ -1.1
VPS72YDR485C CDC3P32457 520 aaKnown RBP8.15□□□□□ -1.1
VPS72YDR485C YDR090CQ03193 310 aa8.15□□□□□ -1.1
VPS72YDR485C OCA5P38738 679 aa8.13□□□□□ -1.11
VPS72YDR485C RPL34AP87262 121 aaPredicted RBP8.12□□□□□ -1.11
VPS72YDR485C YML083CQ04526 418 aa8.12□□□□□ -1.11
VPS72YDR485C BIO2P32451 375 aa8.11□□□□□ -1.11
VPS72YDR485C MIF2P35201 549 aa8.11□□□□□ -1.11
VPS72YDR485C UBP14P38237 781 aaKnown RBP8.11□□□□□ -1.11
VPS72YDR485C ATG36P46983 293 aa8.11□□□□□ -1.11
VPS72YDR485C SPC42P36094 363 aa8.11□□□□□ -1.11
VPS72YDR485C URN1Q06525 465 aaKnown RBP8.1□□□□□ -1.11
VPS72YDR485C YPR204WQ08995 1032 aa8.09□□□□□ -1.11
VPS72YDR485C BRN1P38170 754 aa8.08□□□□□ -1.12
VPS72YDR485C STS1P38637 319 aa8.08□□□□□ -1.12
VPS72YDR485C FAR11P53917 953 aa8.08□□□□□ -1.12
VPS72YDR485C HAT1Q12341 374 aa8.08□□□□□ -1.12
VPS72YDR485C MRPL32P25348 183 aa8.08□□□□□ -1.12
VPS72YDR485C PUP1P25043 261 aa8.07□□□□□ -1.12
VPS72YDR485C DOS2P54858 310 aa8.07□□□□□ -1.12
VPS72YDR485C RTG2P32608 588 aaKnown RBP8.06□□□□□ -1.12
VPS72YDR485C LAM6Q08001 693 aa8.06□□□□□ -1.12
VPS72YDR485C RPL34BP40525 121 aaKnown RBP8.05□□□□□ -1.12
VPS72YDR485C IPL1P38991 367 aa8.05□□□□□ -1.12
VPS72YDR485C TYW1Q08960 810 aaKnown RBP8.05□□□□□ -1.12
VPS72YDR485C ALD2P47771 506 aa8.04□□□□□ -1.12
VPS72YDR485C VHR2P40041 505 aa8.04□□□□□ -1.12
VPS72YDR485C PSE1P32337 1089 aaKnown RBP8.03□□□□□ -1.12
VPS72YDR485C PTC3P34221 468 aaKnown RBP8.03□□□□□ -1.12
VPS72YDR485C YBL036CP38197 257 aa8.01□□□□□ -1.13
VPS72YDR485C YNL108CP53929 270 aa8□□□□□ -1.13
VPS72YDR485C YLR326WQ06170 240 aaKnown RBP8□□□□□ -1.13
VPS72YDR485C RRP15Q06511 250 aaPredicted RBP8□□□□□ -1.13
VPS72YDR485C SUP45P12385 437 aaKnown RBP7.98□□□□□ -1.13
VPS72YDR485C ALD4P46367 519 aaKnown RBP7.98□□□□□ -1.13
VPS72YDR485C YMR1P47147 688 aaKnown RBP RIP-Chip data7.98□□□□□ -1.13not detected
VPS72YDR485C ITT1Q04638 464 aa7.98□□□□□ -1.13
VPS72YDR485C YFR006WP43590 535 aa7.96□□□□□ -1.14
VPS72YDR485C ATE1P16639 503 aa7.95□□□□□ -1.14
VPS72YDR485C ENO1P00924 437 aaKnown RBP7.94□□□□□ -1.14
VPS72YDR485C DBP1P24784 617 aaKnown RBP7.94□□□□□ -1.14
VPS72YDR485C MRX10Q05648 414 aa7.94□□□□□ -1.14
VPS72YDR485C SWE1P32944 819 aa7.93□□□□□ -1.14
VPS72YDR485C TEA1P47988 759 aa7.93□□□□□ -1.14
VPS72YDR485C NUG1P40010 520 aaKnown RBP7.92□□□□□ -1.14
VPS72YDR485C CST6P40535 587 aa7.92□□□□□ -1.14
VPS72YDR485C STM1P39015 273 aaKnown RBP7.91□□□□□ -1.14
VPS72YDR485C YAF9P53930 226 aa7.91□□□□□ -1.14
VPS72YDR485C ENO2P00925 437 aaKnown RBP7.91□□□□□ -1.14
VPS72YDR485C ASF1P32447 279 aa7.91□□□□□ -1.14
VPS72YDR485C TGL4P36165 910 aa7.91□□□□□ -1.14
VPS72YDR485C PCS60P38137 543 aaKnown RBP RIP-Chip data7.91□□□□□ -1.14 RIP-Chip
VPS72YDR485C YBL113CQ7M4S9 792 aa7.91□□□□□ -1.14
VPS72YDR485C ORC6P38826 435 aa7.9□□□□□ -1.14
VPS72YDR485C RAD59Q12223 238 aa7.9□□□□□ -1.14
VPS72YDR485C YDJ1P25491 409 aaKnown RBP7.9□□□□□ -1.15
VPS72YDR485C CSE4P36012 229 aa7.9□□□□□ -1.15
VPS72YDR485C FPR4Q06205 392 aaPredicted RBP7.9□□□□□ -1.15
VPS72YDR485C ERP5P38819 212 aa7.89□□□□□ -1.15
VPS72YDR485C MSC6Q08818 692 aaKnown RBP7.89□□□□□ -1.15
VPS72YDR485C KEX1P09620 729 aa7.89□□□□□ -1.15
VPS72YDR485C YJR008WP47085 338 aa7.88□□□□□ -1.15
VPS72YDR485C SCY1P53009 804 aa7.88□□□□□ -1.15
VPS72YDR485C NIS1P53939 407 aa7.88□□□□□ -1.15
VPS72YDR485C RIM21P48565 533 aa7.87□□□□□ -1.15
VPS72YDR485C TRL1P09880 827 aaKnown RBP7.86□□□□□ -1.15
VPS72YDR485C SEC20P28791 383 aa7.86□□□□□ -1.15
VPS72YDR485C NMD2P38798 1089 aaKnown RBP7.86□□□□□ -1.15
VPS72YDR485C NNF1P47149 201 aa7.86□□□□□ -1.15
VPS72YDR485C MAG2Q06436 670 aaKnown RBP7.86□□□□□ -1.15
VPS72YDR485C WHI5Q12416 295 aa7.86□□□□□ -1.15
VPS72YDR485C RTS3P53289 263 aa7.85□□□□□ -1.15
VPS72YDR485C HST2P53686 357 aa7.85□□□□□ -1.15
VPS72YDR485C RGR1P19263 1082 aa7.85□□□□□ -1.15
VPS72YDR485C SCJ1P25303 377 aa7.85□□□□□ -1.15
VPS72YDR485C SIS2P36024 562 aa7.84□□□□□ -1.15
VPS72YDR485C TPS3P38426 1054 aaKnown RBP7.84□□□□□ -1.15
VPS72YDR485C FPK1P53739 893 aa7.84□□□□□ -1.15
VPS72YDR485C STB3Q12427 513 aa7.84□□□□□ -1.15
VPS72YDR485C ESS1P22696 170 aa7.84□□□□□ -1.15
VPS72YDR485C PEP12P32854 288 aa7.84□□□□□ -1.15
VPS72YDR485C KIC1P38692 1080 aa7.84□□□□□ -1.15
Retrieved 100 of 5,963 RNA–protein pairs in 72.1 ms