RNA–Protein interactions for RNA: YDR301W

CFT1, Transcript of RNA-binding subunit of the mRNA cleavage and polyadenylation factor, yeastyeast

Gene CFT1, Length 4,074 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CFT1YDR301W YRF1-1P0CX20 1796 aa2.82□□□□□ -1.96
CFT1YDR301W YRF1-5P0CX21 1796 aa2.82□□□□□ -1.96
CFT1YDR301W YRF1-8P0CX22 1796 aa2.82□□□□□ -1.96
CFT1YDR301W SNT2P53127 1403 aa2.81□□□□□ -1.96
CFT1YDR301W SPP41P38904 1435 aa2.81□□□□□ -1.96
CFT1YDR301W NUP170P38181 1502 aa2.8□□□□□ -1.96
CFT1YDR301W PDR12Q02785 1511 aa2.8□□□□□ -1.96
CFT1YDR301W TSC11P40061 1430 aa2.79□□□□□ -1.96
CFT1YDR301W YBT1P32386 1661 aa2.78□□□□□ -1.96
CFT1YDR301W RQC2Q12532 1038 aaKnown RBP2.78□□□□□ -1.96
CFT1YDR301W SPO14P36126 1683 aa2.77□□□□□ -1.97
CFT1YDR301W PDR10P51533 1564 aa2.77□□□□□ -1.97
CFT1YDR301W GEA2P39993 1459 aaKnown RBP2.77□□□□□ -1.97
CFT1YDR301W TFA1P36100 482 aa2.77□□□□□ -1.97
CFT1YDR301W GDB1Q06625 1536 aa2.76□□□□□ -1.97
CFT1YDR301W TRM732Q03496 1420 aa2.76□□□□□ -1.97
CFT1YDR301W PDR15Q04182 1529 aaKnown RBP2.76□□□□□ -1.97
CFT1YDR301W LTE1P07866 1435 aa2.75□□□□□ -1.97
CFT1YDR301W NUP159P40477 1460 aa2.75□□□□□ -1.97
CFT1YDR301W STH1P32597 1359 aa2.75□□□□□ -1.97
CFT1YDR301W TY3B-GQ99315 1547 aa2.75□□□□□ -1.97
CFT1YDR301W DOP1Q03921 1698 aa2.75□□□□□ -1.97
CFT1YDR301W BUD3P25558 1636 aa2.74□□□□□ -1.97
CFT1YDR301W CAT8P39113 1433 aa2.74□□□□□ -1.97
CFT1YDR301W BNI1P41832 1953 aa2.74□□□□□ -1.97
CFT1YDR301W CHC1P22137 1653 aaKnown RBP2.73□□□□□ -1.97
CFT1YDR301W BFR2Q06631 534 aaKnown RBP2.73□□□□□ -1.97
CFT1YDR301W VPS15P22219 1454 aa2.73□□□□□ -1.97
CFT1YDR301W TRM3Q07527 1436 aa2.72□□□□□ -1.97
CFT1YDR301W IQG1Q12280 1495 aa2.71□□□□□ -1.98
CFT1YDR301W ARO1P08566 1588 aaKnown RBP2.71□□□□□ -1.98
CFT1YDR301W TAF7Q05021 590 aa2.71□□□□□ -1.98
CFT1YDR301W HAP1P0CE41 1502 aa2.7□□□□□ -1.98
CFT1YDR301W GEA1P47102 1408 aaPredicted RBP2.69□□□□□ -1.98
CFT1YDR301W SEC7P11075 2009 aaKnown RBP2.68□□□□□ -1.98
CFT1YDR301W DNF2Q12675 1612 aa2.68□□□□□ -1.98
CFT1YDR301W GCN2P15442 1659 aa2.68□□□□□ -1.98
CFT1YDR301W PDR5P33302 1511 aaKnown RBP2.67□□□□□ -1.98
CFT1YDR301W YOR093CQ12275 1648 aa2.64□□□□□ -1.99
CFT1YDR301W IKI3Q06706 1349 aaKnown RBP2.64□□□□□ -1.99
CFT1YDR301W MMS1Q06211 1407 aa2.64□□□□□ -1.99
CFT1YDR301W NUP188P52593 1655 aaKnown RBP2.64□□□□□ -1.99
CFT1YDR301W MET10P39692 1035 aa2.64□□□□□ -1.99
CFT1YDR301W SRB8P25648 1427 aa2.63□□□□□ -1.99
CFT1YDR301W YSP2Q06681 1438 aa2.63□□□□□ -1.99
CFT1YDR301W DRS2P39524 1355 aa2.63□□□□□ -1.99
CFT1YDR301W NUP157P40064 1391 aaKnown RBP2.63□□□□□ -1.99
CFT1YDR301W DNF3Q12674 1656 aa2.62□□□□□ -1.99
CFT1YDR301W VMR1P38735 1592 aa2.61□□□□□ -1.99
CFT1YDR301W TSR3Q12094 313 aaKnown RBP2.6□□□□□ -1.99
CFT1YDR301W RTT106P40161 455 aa2.59□□□□□ -1.99
CFT1YDR301W TY1B-NL2Q99337 1749 aaKnown RBP2.58□□□□□ -2
CFT1YDR301W IML1P47170 1584 aa2.57□□□□□ -2
CFT1YDR301W NUP192P47054 1683 aa2.57□□□□□ -2
CFT1YDR301W BNR1P40450 1375 aa2.56□□□□□ -2
CFT1YDR301W ITT1Q04638 464 aa2.56□□□□□ -2
CFT1YDR301W SSM4P40318 1319 aa2.56□□□□□ -2
CFT1YDR301W SAS10Q12136 610 aaPredicted RBP2.55□□□□□ -2
CFT1YDR301W AVT3P36062 692 aa2.54□□□□□ -2
CFT1YDR301W TY3B-IQ7LHG5 1498 aaKnown RBP2.53□□□□□ -2
CFT1YDR301W IFH1P39520 1085 aa2.52□□□□□ -2.01
CFT1YDR301W RAV1P47104 1357 aa2.52□□□□□ -2.01
CFT1YDR301W USO1P25386 1790 aa2.52□□□□□ -2.01
CFT1YDR301W DIP2Q12220 943 aaPredicted RBP2.51□□□□□ -2.01
CFT1YDR301W URN1Q06525 465 aaKnown RBP2.51□□□□□ -2.01
CFT1YDR301W BCK1Q01389 1478 aa2.5□□□□□ -2.01
CFT1YDR301W PDR11P40550 1411 aa2.5□□□□□ -2.01
CFT1YDR301W CFT1Q06632 1357 aaKnown RBP2.5□□□□□ -2.01
CFT1YDR301W RTC1Q08281 1341 aa2.49□□□□□ -2.01
CFT1YDR301W BUD21Q08492 214 aaPredicted RBP2.48□□□□□ -2.01
CFT1YDR301W YAP3P38749 330 aa2.48□□□□□ -2.01
CFT1YDR301W CKB1P43639 278 aa2.47□□□□□ -2.01
CFT1YDR301W IPL1P38991 367 aa2.47□□□□□ -2.01
CFT1YDR301W RPG1P38249 964 aaKnown RBP2.46□□□□□ -2.02
CFT1YDR301W YRF1-2P40105 1681 aa2.45□□□□□ -2.02
CFT1YDR301W MIF2P35201 549 aa2.45□□□□□ -2.02
CFT1YDR301W PTP3P40048 928 aa2.45□□□□□ -2.02
CFT1YDR301W MLP1Q02455 1875 aaKnown RBP2.45□□□□□ -2.02
CFT1YDR301W TY4B-HP0C2J7 1802 aa2.45□□□□□ -2.02
CFT1YDR301W TY4B-JP47024 1803 aa2.45□□□□□ -2.02
CFT1YDR301W DCD1P06773 312 aa2.44□□□□□ -2.02
CFT1YDR301W RRP5Q05022 1729 aaKnown RBP2.44□□□□□ -2.02
CFT1YDR301W MAK10Q02197 733 aa2.43□□□□□ -2.02
CFT1YDR301W APC1P53886 1748 aa2.43□□□□□ -2.02
CFT1YDR301W SCT1P32784 759 aa2.42□□□□□ -2.02
CFT1YDR301W AAD16Q02895 342 aa2.42□□□□□ -2.02
CFT1YDR301W PAF1P38351 445 aa2.42□□□□□ -2.02
CFT1YDR301W YMR196WQ04336 1088 aa2.42□□□□□ -2.02
CFT1YDR301W YLR419WQ06698 1435 aaKnown RBP2.41□□□□□ -2.02
CFT1YDR301W ABP1P15891 592 aaKnown RBP2.41□□□□□ -2.02
CFT1YDR301W PSK1P31374 1356 aa2.41□□□□□ -2.02
CFT1YDR301W YIL177CP40434 1758 aa2.41□□□□□ -2.02
CFT1YDR301W YJL225CP40889 1758 aa2.41□□□□□ -2.02
CFT1YDR301W FKS3Q04952 1785 aa2.41□□□□□ -2.02
CFT1YDR301W TYS1P36421 394 aaKnown RBP2.41□□□□□ -2.02
CFT1YDR301W IOC4Q04213 475 aa2.41□□□□□ -2.02
CFT1YDR301W ESL2P36168 1195 aa2.4□□□□□ -2.03
CFT1YDR301W ALD4P46367 519 aaKnown RBP2.4□□□□□ -2.03
CFT1YDR301W URB1P34241 1764 aaKnown RBP2.39□□□□□ -2.03
CFT1YDR301W NOP7P53261 605 aaKnown RBP2.39□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 33 ms