RNA–Protein interactions for RNA: YDL195W

SEC31, Transcript of Component of the Sec13p-Sec31p complex of the COPII vesicle coat, yeastyeast

Gene SEC31, Length 3,822 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC31YDL195W YRF1-5P0CX21 1796 aa3.45□□□□□ -1.86
SEC31YDL195W YRF1-8P0CX22 1796 aa3.45□□□□□ -1.86
SEC31YDL195W SNQ2P32568 1501 aaKnown RBP3.44□□□□□ -1.86
SEC31YDL195W SNT2P53127 1403 aa3.44□□□□□ -1.86
SEC31YDL195W TRM732Q03496 1420 aa3.43□□□□□ -1.86
SEC31YDL195W GCN2P15442 1659 aa3.43□□□□□ -1.86
SEC31YDL195W CDC25P04821 1589 aa3.42□□□□□ -1.86
SEC31YDL195W SPO14P36126 1683 aa3.41□□□□□ -1.86
SEC31YDL195W PDR12Q02785 1511 aa3.4□□□□□ -1.87
SEC31YDL195W PDR15Q04182 1529 aaKnown RBP3.39□□□□□ -1.87
SEC31YDL195W VTH1P40438 1549 aa3.37□□□□□ -1.87
SEC31YDL195W VTH2P40890 1549 aa3.37□□□□□ -1.87
SEC31YDL195W YTA7P40340 1379 aa3.37□□□□□ -1.87
SEC31YDL195W TAF2P23255 1407 aa3.36□□□□□ -1.87
SEC31YDL195W DNF1P32660 1571 aa3.35□□□□□ -1.87
SEC31YDL195W ARO1P08566 1588 aaKnown RBP3.35□□□□□ -1.87
SEC31YDL195W CHC1P22137 1653 aaKnown RBP3.35□□□□□ -1.87
SEC31YDL195W PTP3P40048 928 aa3.35□□□□□ -1.87
SEC31YDL195W GDB1Q06625 1536 aa3.34□□□□□ -1.87
SEC31YDL195W YOR093CQ12275 1648 aa3.33□□□□□ -1.88
SEC31YDL195W IQG1Q12280 1495 aa3.32□□□□□ -1.88
SEC31YDL195W SPP41P38904 1435 aa3.32□□□□□ -1.88
SEC31YDL195W NUP192P47054 1683 aa3.3□□□□□ -1.88
SEC31YDL195W DOP1Q03921 1698 aa3.3□□□□□ -1.88
SEC31YDL195W PAN1P32521 1480 aa3.29□□□□□ -1.88
SEC31YDL195W NUP159P40477 1460 aa3.28□□□□□ -1.88
SEC31YDL195W VMR1P38735 1592 aa3.28□□□□□ -1.88
SEC31YDL195W IKI3Q06706 1349 aaKnown RBP3.28□□□□□ -1.88
SEC31YDL195W VPS15P22219 1454 aa3.27□□□□□ -1.89
SEC31YDL195W TSC11P40061 1430 aa3.27□□□□□ -1.89
SEC31YDL195W HAP1P0CE41 1502 aa3.26□□□□□ -1.89
SEC31YDL195W DIP2Q12220 943 aaPredicted RBP3.26□□□□□ -1.89
SEC31YDL195W GEA2P39993 1459 aaKnown RBP3.26□□□□□ -1.89
SEC31YDL195W TY3B-IQ7LHG5 1498 aaKnown RBP3.26□□□□□ -1.89
SEC31YDL195W GEA1P47102 1408 aaPredicted RBP3.24□□□□□ -1.89
SEC31YDL195W CAT8P39113 1433 aa3.24□□□□□ -1.89
SEC31YDL195W NUP188P52593 1655 aaKnown RBP3.23□□□□□ -1.89
SEC31YDL195W SSM4P40318 1319 aa3.22□□□□□ -1.89
SEC31YDL195W TY1B-NL2Q99337 1749 aaKnown RBP3.22□□□□□ -1.89
SEC31YDL195W BUD3P25558 1636 aa3.22□□□□□ -1.89
SEC31YDL195W DNF3Q12674 1656 aa3.21□□□□□ -1.89
SEC31YDL195W SEC7P11075 2009 aaKnown RBP3.21□□□□□ -1.9
SEC31YDL195W YLR419WQ06698 1435 aaKnown RBP3.21□□□□□ -1.9
SEC31YDL195W BNI1P41832 1953 aa3.2□□□□□ -1.9
SEC31YDL195W MIF2P35201 549 aa3.2□□□□□ -1.9
SEC31YDL195W DNF2Q12675 1612 aa3.2□□□□□ -1.9
SEC31YDL195W DMA2P53924 522 aa3.17□□□□□ -1.9
SEC31YDL195W STH1P32597 1359 aa3.17□□□□□ -1.9
SEC31YDL195W IML1P47170 1584 aa3.17□□□□□ -1.9
SEC31YDL195W YSP2Q06681 1438 aa3.16□□□□□ -1.9
SEC31YDL195W YIL177CP40434 1758 aa3.15□□□□□ -1.9
SEC31YDL195W YJL225CP40889 1758 aa3.15□□□□□ -1.9
SEC31YDL195W SNF2P22082 1703 aa3.15□□□□□ -1.91
SEC31YDL195W APC1P53886 1748 aa3.14□□□□□ -1.91
SEC31YDL195W MET5P47169 1442 aa3.13□□□□□ -1.91
SEC31YDL195W AVT3P36062 692 aa3.13□□□□□ -1.91
SEC31YDL195W SRB8P25648 1427 aa3.12□□□□□ -1.91
SEC31YDL195W ABP1P15891 592 aaKnown RBP3.11□□□□□ -1.91
SEC31YDL195W USO1P25386 1790 aa3.11□□□□□ -1.91
SEC31YDL195W PDR11P40550 1411 aa3.1□□□□□ -1.91
SEC31YDL195W MLP1Q02455 1875 aaKnown RBP3.1□□□□□ -1.91
SEC31YDL195W RRP5Q05022 1729 aaKnown RBP3.09□□□□□ -1.91
SEC31YDL195W YAH1Q12184 172 aaKnown RBP3.07□□□□□ -1.92
SEC31YDL195W LTE1P07866 1435 aa3.07□□□□□ -1.92
SEC31YDL195W TY4B-HP0C2J7 1802 aa3.06□□□□□ -1.92
SEC31YDL195W MMS1Q06211 1407 aa3.06□□□□□ -1.92
SEC31YDL195W TRM3Q07527 1436 aa3.06□□□□□ -1.92
SEC31YDL195W TY4B-JP47024 1803 aa3.06□□□□□ -1.92
SEC31YDL195W NSR1P27476 414 aaKnown RBP RIP-Chip data3.05□□□□□ -1.92not detected
SEC31YDL195W YFR006WP43590 535 aa3.05□□□□□ -1.92
SEC31YDL195W LEO1P38439 464 aa3.04□□□□□ -1.92
SEC31YDL195W YRF1-2P40105 1681 aa3.04□□□□□ -1.92
SEC31YDL195W DUR1,2P32528 1835 aaKnown RBP3.03□□□□□ -1.92
SEC31YDL195W IOC4Q04213 475 aa3.02□□□□□ -1.93
SEC31YDL195W RAV1P47104 1357 aa3.01□□□□□ -1.93
SEC31YDL195W BCK1Q01389 1478 aa3□□□□□ -1.93
SEC31YDL195W URB1P34241 1764 aaKnown RBP3□□□□□ -1.93
SEC31YDL195W FKS3Q04952 1785 aa2.98□□□□□ -1.93
SEC31YDL195W UTP10P42945 1769 aaKnown RBP2.97□□□□□ -1.93
SEC31YDL195W YML133CQ03099 1374 aa2.96□□□□□ -1.94
SEC31YDL195W YLL067CQ07888 1374 aa2.96□□□□□ -1.94
SEC31YDL195W YLL066CQ99208 1374 aa2.96□□□□□ -1.94
SEC31YDL195W NUP157P40064 1391 aaKnown RBP2.96□□□□□ -1.94
SEC31YDL195W RTC1Q08281 1341 aa2.95□□□□□ -1.94
SEC31YDL195W SPB4P25808 606 aaPredicted RBP2.95□□□□□ -1.94
SEC31YDL195W YRF1-3P0CX14 1859 aa2.94□□□□□ -1.94
SEC31YDL195W YRF1-7P0CX15 1859 aa2.94□□□□□ -1.94
SEC31YDL195W YRF1-6P53819 1859 aa2.94□□□□□ -1.94
SEC31YDL195W PRS1P32895 427 aaKnown RBP2.94□□□□□ -1.94
SEC31YDL195W MHP1P43638 1398 aa2.93□□□□□ -1.94
SEC31YDL195W RPL17AP05740 184 aaKnown RBP2.91□□□□□ -1.94
SEC31YDL195W RPL17BP46990 184 aaKnown RBP2.91□□□□□ -1.94
SEC31YDL195W SEC3P33332 1336 aaKnown RBP2.91□□□□□ -1.94
SEC31YDL195W URN1Q06525 465 aaKnown RBP2.9□□□□□ -1.94
SEC31YDL195W DRS2P39524 1355 aa2.9□□□□□ -1.94
SEC31YDL195W ENP1P38333 483 aaKnown RBP2.9□□□□□ -1.95
SEC31YDL195W YRF1-4O13559 1382 aa2.9□□□□□ -1.95
SEC31YDL195W RIM15P43565 1770 aa2.89□□□□□ -1.95
SEC31YDL195W CFT1Q06632 1357 aaKnown RBP2.88□□□□□ -1.95
SEC31YDL195W FAS2P19097 1887 aaKnown RBP2.88□□□□□ -1.95
Retrieved 100 of 5,963 RNA–protein pairs in 111.1 ms