RNA–Protein interactions for RNA: YDL116W

NUP84, Transcript of Subunit of the Nup84p subcomplex of the nuclear pore complex (NPC), yeastyeast

Gene NUP84, Length 2,181 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP84YDL116W TY1B-JR1P47098 1755 aa9.45□□□□□ -0.9
NUP84YDL116W TY1B-ML2Q03434 1755 aaKnown RBP9.45□□□□□ -0.9
NUP84YDL116W TY1B-ER1Q03612 1755 aa9.45□□□□□ -0.9
NUP84YDL116W TY1B-ML1Q04711 1755 aaKnown RBP9.45□□□□□ -0.9
NUP84YDL116W TY1B-GR2Q12269 1755 aa9.45□□□□□ -0.9
NUP84YDL116W TY1B-OLQ12273 1755 aa9.45□□□□□ -0.9
NUP84YDL116W TY1B-PLQ12414 1755 aaKnown RBP9.45□□□□□ -0.9
NUP84YDL116W TY1B-BRQ12193 1756 aa9.43□□□□□ -0.9
NUP84YDL116W TY1B-GR3Q12316 1755 aa9.43□□□□□ -0.9
NUP84YDL116W TY1B-ORQ92393 1755 aa9.43□□□□□ -0.9
NUP84YDL116W DNF1P32660 1571 aa9.41□□□□□ -0.9
NUP84YDL116W VTH1P40438 1549 aa9.41□□□□□ -0.9
NUP84YDL116W VTH2P40890 1549 aa9.41□□□□□ -0.9
NUP84YDL116W ESC1Q03661 1658 aaKnown RBP9.4□□□□□ -0.9
NUP84YDL116W YBT1P32386 1661 aa9.39□□□□□ -0.91
NUP84YDL116W PSD2P53037 1138 aaKnown RBP9.37□□□□□ -0.91
NUP84YDL116W FUN12P39730 1002 aaKnown RBP9.36□□□□□ -0.91
NUP84YDL116W CKB1P43639 278 aa9.35□□□□□ -0.91
NUP84YDL116W PTP3P40048 928 aa9.34□□□□□ -0.91
NUP84YDL116W GDB1Q06625 1536 aa9.34□□□□□ -0.91
NUP84YDL116W TY1B-JR2P47100 1755 aaKnown RBP9.33□□□□□ -0.92
NUP84YDL116W TY1B-ER2Q03619 1755 aa9.33□□□□□ -0.92
NUP84YDL116W TY1B-MR1Q04214 1755 aa9.33□□□□□ -0.92
NUP84YDL116W TY1B-MR2Q04670 1755 aaKnown RBP9.33□□□□□ -0.92
NUP84YDL116W TY1B-LR1Q12088 1755 aaKnown RBP9.33□□□□□ -0.92
NUP84YDL116W TY1B-NL1Q12112 1755 aa9.33□□□□□ -0.92
NUP84YDL116W TY1B-GR1Q12141 1755 aa9.33□□□□□ -0.92
NUP84YDL116W TY1B-BLQ12490 1755 aa9.33□□□□□ -0.92
NUP84YDL116W PRS1P32895 427 aaKnown RBP9.33□□□□□ -0.92
NUP84YDL116W CDC25P04821 1589 aa9.3□□□□□ -0.92
NUP84YDL116W SNT2P53127 1403 aa9.3□□□□□ -0.92
NUP84YDL116W BUD3P25558 1636 aa9.3□□□□□ -0.92
NUP84YDL116W ARO1P08566 1588 aaKnown RBP9.28□□□□□ -0.92
NUP84YDL116W NST1P53935 1240 aa9.26□□□□□ -0.93
NUP84YDL116W CFT1Q06632 1357 aaKnown RBP9.25□□□□□ -0.93
NUP84YDL116W SEC3P33332 1336 aaKnown RBP9.24□□□□□ -0.93
NUP84YDL116W NOP7P53261 605 aaKnown RBP9.22□□□□□ -0.93
NUP84YDL116W IRC20Q06554 1556 aa9.21□□□□□ -0.93
NUP84YDL116W NUP159P40477 1460 aa9.21□□□□□ -0.94
NUP84YDL116W NTE1Q04958 1679 aa9.19□□□□□ -0.94
NUP84YDL116W SRB8P25648 1427 aa9.19□□□□□ -0.94
NUP84YDL116W IQG1Q12280 1495 aa9.19□□□□□ -0.94
NUP84YDL116W GEA2P39993 1459 aaKnown RBP9.18□□□□□ -0.94
NUP84YDL116W BUD21Q08492 214 aaPredicted RBP9.17□□□□□ -0.94
NUP84YDL116W RPO21P04050 1733 aaKnown RBP9.16□□□□□ -0.94
NUP84YDL116W RPA190P10964 1664 aaKnown RBP9.14□□□□□ -0.95
NUP84YDL116W GCN2P15442 1659 aa9.13□□□□□ -0.95
NUP84YDL116W CAT8P39113 1433 aa9.13□□□□□ -0.95
NUP84YDL116W YPR148CQ06523 435 aa9.11□□□□□ -0.95
NUP84YDL116W TAF5P38129 798 aa9.1□□□□□ -0.95
NUP84YDL116W NUP157P40064 1391 aaKnown RBP9.1□□□□□ -0.95
NUP84YDL116W MHP1P43638 1398 aa9.1□□□□□ -0.95
NUP84YDL116W SPO14P36126 1683 aa9.09□□□□□ -0.95
NUP84YDL116W YLR419WQ06698 1435 aaKnown RBP9.07□□□□□ -0.96
NUP84YDL116W PDS5Q04264 1277 aa9.06□□□□□ -0.96
NUP84YDL116W YFR016CP43597 1233 aaKnown RBP9.04□□□□□ -0.96
NUP84YDL116W RPL17AP05740 184 aaKnown RBP9.03□□□□□ -0.96
NUP84YDL116W RPL17BP46990 184 aaKnown RBP9.03□□□□□ -0.96
NUP84YDL116W PDR12Q02785 1511 aa9.02□□□□□ -0.97
NUP84YDL116W PAF1P38351 445 aa9.02□□□□□ -0.97
NUP84YDL116W KIP3P53086 805 aaKnown RBP9.02□□□□□ -0.97
NUP84YDL116W YSP2Q06681 1438 aa9.02□□□□□ -0.97
NUP84YDL116W SSP1P38871 571 aa9.02□□□□□ -0.97
NUP84YDL116W ISW2Q08773 1120 aa9.01□□□□□ -0.97
NUP84YDL116W LTE1P07866 1435 aa9□□□□□ -0.97
NUP84YDL116W MET10P39692 1035 aa9□□□□□ -0.97
NUP84YDL116W PDR11P40550 1411 aa9□□□□□ -0.97
NUP84YDL116W RPC31P17890 251 aa8.99□□□□□ -0.97
NUP84YDL116W YRF1-1P0CX20 1796 aa8.99□□□□□ -0.97
NUP84YDL116W YRF1-5P0CX21 1796 aa8.99□□□□□ -0.97
NUP84YDL116W YRF1-8P0CX22 1796 aa8.99□□□□□ -0.97
NUP84YDL116W YOR093CQ12275 1648 aa8.99□□□□□ -0.97
NUP84YDL116W RVB2Q12464 471 aaKnown RBP8.94□□□□□ -0.98
NUP84YDL116W RTG3P38165 486 aa8.92□□□□□ -0.98
NUP84YDL116W DOP1Q03921 1698 aa8.92□□□□□ -0.98
NUP84YDL116W TY3B-IQ7LHG5 1498 aaKnown RBP8.91□□□□□ -0.98
NUP84YDL116W RIM101P33400 625 aa8.91□□□□□ -0.98
NUP84YDL116W BNR1P40450 1375 aa8.91□□□□□ -0.98
NUP84YDL116W IME2P32581 645 aa8.9□□□□□ -0.98
NUP84YDL116W DRS2P39524 1355 aa8.9□□□□□ -0.98
NUP84YDL116W RPG1P38249 964 aaKnown RBP8.89□□□□□ -0.99
NUP84YDL116W PDR5P33302 1511 aaKnown RBP8.89□□□□□ -0.99
NUP84YDL116W TRK1P12685 1235 aa8.89□□□□□ -0.99
NUP84YDL116W OPY1P38271 328 aa8.89□□□□□ -0.99
NUP84YDL116W DMA2P53924 522 aa8.89□□□□□ -0.99
NUP84YDL116W MMS1Q06211 1407 aa8.89□□□□□ -0.99
NUP84YDL116W VMR1P38735 1592 aa8.88□□□□□ -0.99
NUP84YDL116W CHC1P22137 1653 aaKnown RBP8.88□□□□□ -0.99
NUP84YDL116W YDL144CQ07589 356 aa8.86□□□□□ -0.99
NUP84YDL116W NUP192P47054 1683 aa8.86□□□□□ -0.99
NUP84YDL116W RTC1Q08281 1341 aa8.85□□□□□ -0.99
NUP84YDL116W RAV1P47104 1357 aa8.85□□□□□ -0.99
NUP84YDL116W MPP10P47083 593 aaKnown RBP8.85□□□□□ -0.99
NUP84YDL116W SUI2P20459 304 aaKnown RBP8.84□□□□□ -0.99
NUP84YDL116W SPE2P21182 396 aa8.83□□□□□ -1
NUP84YDL116W SPT21P35209 758 aa8.82□□□□□ -1
NUP84YDL116W YAP3P38749 330 aa8.81□□□□□ -1
NUP84YDL116W YEF3P16521 1044 aaKnown RBP8.8□□□□□ -1
NUP84YDL116W CLC1P17891 233 aa8.8□□□□□ -1
NUP84YDL116W REB1P21538 810 aa8.8□□□□□ -1
Retrieved 100 of 5,963 RNA–protein pairs in 13.1 ms