RNA–Protein interactions for RNA: YDL058W

USO1, Transcript of Essential protein involved in vesicle-mediated ER to Golgi transport, yeastyeast

Gene USO1, Length 5,373 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
USO1YDL058W PRY3P47033 881 aa2.48□□□□□ -2.01
USO1YDL058W TAF13P11747 167 aa2.48□□□□□ -2.01
USO1YDL058W RED1P14291 827 aa2.48□□□□□ -2.01
USO1YDL058W GDT1P38301 280 aaPredicted RBP2.47□□□□□ -2.01
USO1YDL058W UTP9P38882 575 aaKnown RBP2.47□□□□□ -2.01
USO1YDL058W YMR124WP39523 943 aaKnown RBP2.47□□□□□ -2.01
USO1YDL058W RTP1Q12751 981 aa2.47□□□□□ -2.01
USO1YDL058W MIC60P36112 540 aa2.47□□□□□ -2.01
USO1YDL058W ENP1P38333 483 aaKnown RBP2.47□□□□□ -2.01
USO1YDL058W SPT8P38915 602 aa2.47□□□□□ -2.01
USO1YDL058W POL5P39985 1022 aaKnown RBP2.47□□□□□ -2.01
USO1YDL058W SRB7P47822 140 aa2.47□□□□□ -2.01
USO1YDL058W MRC1P25588 1096 aa2.47□□□□□ -2.01
USO1YDL058W NNF2P53253 936 aa2.47□□□□□ -2.01
USO1YDL058W NOP56Q12460 504 aaKnown RBP RIP-Chip data2.47□□□□□ -2.01not detected
USO1YDL058W SPT2P06843 333 aaPredicted RBP2.47□□□□□ -2.01
USO1YDL058W TMA64Q04600 565 aaKnown RBP2.47□□□□□ -2.01
USO1YDL058W PDI1P17967 522 aaKnown RBP2.46□□□□□ -2.01
USO1YDL058W CLB5P30283 435 aa2.46□□□□□ -2.01
USO1YDL058W NNF1P47149 201 aa2.46□□□□□ -2.01
USO1YDL058W SAS3P34218 831 aa2.46□□□□□ -2.02
USO1YDL058W SSP1P38871 571 aa2.46□□□□□ -2.02
USO1YDL058W YFR016CP43597 1233 aaKnown RBP2.46□□□□□ -2.02
USO1YDL058W PLP2Q12017 286 aa2.46□□□□□ -2.02
USO1YDL058W DSF2P38213 736 aa2.46□□□□□ -2.02
USO1YDL058W MRX12P47084 519 aa2.46□□□□□ -2.02
USO1YDL058W OCA1P50946 238 aaPredicted RBP2.46□□□□□ -2.02
USO1YDL058W VPS9P54787 451 aa2.46□□□□□ -2.02
USO1YDL058W PSR2Q07949 397 aa2.46□□□□□ -2.02
USO1YDL058W TOA1P32773 286 aa2.46□□□□□ -2.02
USO1YDL058W STM1P39015 273 aaKnown RBP2.46□□□□□ -2.02
USO1YDL058W MEI5P32489 222 aa2.46□□□□□ -2.02
USO1YDL058W YKL100CP34248 587 aa2.46□□□□□ -2.02
USO1YDL058W RTT106P40161 455 aa2.46□□□□□ -2.02
USO1YDL058W NST1P53935 1240 aa2.45□□□□□ -2.02
USO1YDL058W SPC19Q03954 165 aa2.45□□□□□ -2.02
USO1YDL058W MGR3Q04472 501 aa2.45□□□□□ -2.02
USO1YDL058W GIN4Q12263 1142 aa2.45□□□□□ -2.02
USO1YDL058W DNA2P38859 1522 aa2.45□□□□□ -2.02
USO1YDL058W SSA1P10591 642 aaKnown RBP2.45□□□□□ -2.02
USO1YDL058W CSE4P36012 229 aa2.45□□□□□ -2.02
USO1YDL058W OPY2Q06810 360 aa2.45□□□□□ -2.02
USO1YDL058W PAF1P38351 445 aa2.45□□□□□ -2.02
USO1YDL058W DMA1P38823 416 aa2.45□□□□□ -2.02
USO1YDL058W SFB2P53953 876 aa2.45□□□□□ -2.02
USO1YDL058W ECM16Q04217 1267 aaKnown RBP2.45□□□□□ -2.02
USO1YDL058W SSA2P10592 639 aaKnown RBP2.44□□□□□ -2.02
USO1YDL058W MEF1P25039 761 aa2.44□□□□□ -2.02
USO1YDL058W NPL6P32832 435 aa2.44□□□□□ -2.02
USO1YDL058W REI1P38344 393 aaPredicted RBP2.44□□□□□ -2.02
USO1YDL058W VHS3Q08438 674 aa2.44□□□□□ -2.02
USO1YDL058W TCB3Q03640 1545 aaKnown RBP2.44□□□□□ -2.02
USO1YDL058W NOB1Q08444 459 aaKnown RBP2.44□□□□□ -2.02
USO1YDL058W PWP2P25635 923 aaKnown RBP2.43□□□□□ -2.02
USO1YDL058W YPP1P46951 817 aa2.43□□□□□ -2.02
USO1YDL058W YAF9P53930 226 aa2.43□□□□□ -2.02
USO1YDL058W PUF6Q04373 656 aaKnown RBP2.43□□□□□ -2.02
USO1YDL058W ITC1P53125 1264 aa2.43□□□□□ -2.02
USO1YDL058W PET100P38958 111 aa2.42□□□□□ -2.02
USO1YDL058W HUL5P53119 910 aa2.42□□□□□ -2.02
USO1YDL058W SFI1Q12369 946 aa2.42□□□□□ -2.02
USO1YDL058W KEX1P09620 729 aa2.42□□□□□ -2.02
USO1YDL058W IMH1Q06704 911 aaKnown RBP2.42□□□□□ -2.02
USO1YDL058W FUN30P31380 1131 aa2.42□□□□□ -2.02
USO1YDL058W VPS27P40343 622 aaKnown RBP2.42□□□□□ -2.02
USO1YDL058W RPC37P36121 282 aa2.42□□□□□ -2.02
USO1YDL058W SMC2P38989 1170 aaKnown RBP2.42□□□□□ -2.02
USO1YDL058W MNR2P35724 969 aa2.41□□□□□ -2.02
USO1YDL058W KEL3Q08979 651 aaPredicted RBP2.41□□□□□ -2.02
USO1YDL058W DID4P36108 232 aa2.41□□□□□ -2.02
USO1YDL058W GEF1P37020 779 aa2.41□□□□□ -2.02
USO1YDL058W SNF7P39929 240 aaKnown RBP2.41□□□□□ -2.02
USO1YDL058W NOC3Q07896 663 aaPredicted RBP2.41□□□□□ -2.02
USO1YDL058W DPS1P04802 557 aaKnown RBP2.41□□□□□ -2.02
USO1YDL058W RAD2P07276 1031 aa2.41□□□□□ -2.02
USO1YDL058W ATG3P40344 310 aa2.41□□□□□ -2.02
USO1YDL058W JIP3O13555 125 aa2.41□□□□□ -2.02
USO1YDL058W BOI2P39969 1040 aa2.41□□□□□ -2.02
USO1YDL058W FAR11P53917 953 aa2.41□□□□□ -2.02
USO1YDL058W NKP1Q12493 238 aa2.41□□□□□ -2.02
USO1YDL058W MDM38Q08179 573 aa2.41□□□□□ -2.02
USO1YDL058W CDC3P32457 520 aaKnown RBP2.4□□□□□ -2.02
USO1YDL058W OCA5P38738 679 aa2.4□□□□□ -2.03
USO1YDL058W NAF1P53919 492 aaKnown RBP2.4□□□□□ -2.03
USO1YDL058W JIP5Q06214 492 aaPredicted RBP2.4□□□□□ -2.03
USO1YDL058W RUD3Q12234 484 aaKnown RBP2.4□□□□□ -2.03
USO1YDL058W EFB1P32471 206 aaKnown RBP2.4□□□□□ -2.03
USO1YDL058W NOG1Q02892 647 aaKnown RBP2.4□□□□□ -2.03
USO1YDL058W RPB2P08518 1224 aaKnown RBP2.4□□□□□ -2.03
USO1YDL058W NMD3P38861 518 aaKnown RBP2.4□□□□□ -2.03
USO1YDL058W SEC27P41811 889 aaKnown RBP2.4□□□□□ -2.03
USO1YDL058W TIM54P47045 478 aa2.4□□□□□ -2.03
USO1YDL058W TIM50Q02776 476 aa2.4□□□□□ -2.03
USO1YDL058W CLF1Q12309 687 aaPredicted RBP2.4□□□□□ -2.03
USO1YDL058W ABP1P15891 592 aaKnown RBP2.39□□□□□ -2.03
USO1YDL058W YEL1P34225 687 aa2.39□□□□□ -2.03
USO1YDL058W CCL1P37366 393 aa2.39□□□□□ -2.03
USO1YDL058W MPP10P47083 593 aaKnown RBP2.39□□□□□ -2.03
USO1YDL058W YGR130CP53278 816 aa2.39□□□□□ -2.03
USO1YDL058W MGA2P40578 1113 aa2.39□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 13 ms