RNA–Protein interactions for RNA: YBR097W

VPS15, Transcript of Serine/threonine protein kinase involved in vacuolar protein sorting, yeastyeast

Gene VPS15, Length 4,365 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS15YBR097W RLF2Q12495 606 aa2.07□□□□□ -2.08
VPS15YBR097W CKB1P43639 278 aa2.07□□□□□ -2.08
VPS15YBR097W COG8Q04632 607 aa2.07□□□□□ -2.08
VPS15YBR097W FPR4Q06205 392 aaPredicted RBP2.07□□□□□ -2.08
VPS15YBR097W YPR148CQ06523 435 aa2.07□□□□□ -2.08
VPS15YBR097W NOP58Q12499 511 aaKnown RBP2.07□□□□□ -2.08
VPS15YBR097W CBF5P33322 483 aaKnown RBP RIP-Chip data2.06□□□□□ -2.08not detected
VPS15YBR097W KRI1P42846 591 aaKnown RBP2.06□□□□□ -2.08
VPS15YBR097W YTA6P40328 754 aa2.06□□□□□ -2.08
VPS15YBR097W TY1B-NL2Q99337 1749 aaKnown RBP2.06□□□□□ -2.08
VPS15YBR097W PAP2P53632 584 aaKnown RBP2.06□□□□□ -2.08
VPS15YBR097W IML1P47170 1584 aa2.06□□□□□ -2.08
VPS15YBR097W SAS3P34218 831 aa2.05□□□□□ -2.08
VPS15YBR097W YFR016CP43597 1233 aaKnown RBP2.05□□□□□ -2.08
VPS15YBR097W OSW7P43611 510 aa2.05□□□□□ -2.08
VPS15YBR097W RLP24Q07915 199 aaKnown RBP2.05□□□□□ -2.08
VPS15YBR097W ENT3P47160 408 aa2.05□□□□□ -2.08
VPS15YBR097W YLH47Q06493 454 aa2.05□□□□□ -2.08
VPS15YBR097W DMA1P38823 416 aa2.05□□□□□ -2.08
VPS15YBR097W SWD1P39706 426 aa2.05□□□□□ -2.08
VPS15YBR097W NST1P53935 1240 aa2.05□□□□□ -2.08
VPS15YBR097W MAK21Q12176 1025 aaKnown RBP2.05□□□□□ -2.08
VPS15YBR097W TRM3Q07527 1436 aa2.04□□□□□ -2.08
VPS15YBR097W TOA1P32773 286 aa2.04□□□□□ -2.08
VPS15YBR097W YJL049WP47048 450 aa2.04□□□□□ -2.08
VPS15YBR097W UTP14Q04500 899 aaKnown RBP2.04□□□□□ -2.08
VPS15YBR097W ESC2Q06340 456 aa2.04□□□□□ -2.08
VPS15YBR097W DIP2Q12220 943 aaPredicted RBP2.04□□□□□ -2.08
VPS15YBR097W RED1P14291 827 aa2.04□□□□□ -2.08
VPS15YBR097W RRN3P36070 627 aa2.04□□□□□ -2.08
VPS15YBR097W RMD1Q03441 430 aa2.04□□□□□ -2.08
VPS15YBR097W TY1B-BRQ12193 1756 aa2.03□□□□□ -2.08
VPS15YBR097W TY1B-GR3Q12316 1755 aa2.03□□□□□ -2.08
VPS15YBR097W TY1B-ORQ92393 1755 aa2.03□□□□□ -2.08
VPS15YBR097W MAK16P10962 306 aaPredicted RBP2.03□□□□□ -2.08
VPS15YBR097W TRZ1P36159 838 aaPredicted RBP2.03□□□□□ -2.08
VPS15YBR097W PAF1P38351 445 aa2.03□□□□□ -2.08
VPS15YBR097W CEF1Q03654 590 aaPredicted RBP2.03□□□□□ -2.08
VPS15YBR097W MGR3Q04472 501 aa2.03□□□□□ -2.08
VPS15YBR097W AIM7Q12156 149 aa2.03□□□□□ -2.08
VPS15YBR097W TAF13P11747 167 aa2.03□□□□□ -2.09
VPS15YBR097W YMR124WP39523 943 aaKnown RBP2.03□□□□□ -2.09
VPS15YBR097W ESF2P53743 316 aaKnown RBP2.03□□□□□ -2.09
VPS15YBR097W VPS9P54787 451 aa2.03□□□□□ -2.09
VPS15YBR097W SPO14P36126 1683 aa2.02□□□□□ -2.09
VPS15YBR097W SMY2P32909 740 aaKnown RBP2.02□□□□□ -2.09
VPS15YBR097W SPB4P25808 606 aaPredicted RBP2.02□□□□□ -2.09
VPS15YBR097W SUB1P54000 292 aaKnown RBP2.02□□□□□ -2.09
VPS15YBR097W VPS15P22219 1454 aa2.02□□□□□ -2.09
VPS15YBR097W FUN30P31380 1131 aa2.01□□□□□ -2.09
VPS15YBR097W OCA1P50946 238 aaPredicted RBP2.01□□□□□ -2.09
VPS15YBR097W NNF2P53253 936 aa2.01□□□□□ -2.09
VPS15YBR097W NOP56Q12460 504 aaKnown RBP RIP-Chip data2.01□□□□□ -2.09not detected
VPS15YBR097W PET100P38958 111 aa2.01□□□□□ -2.09
VPS15YBR097W RAD26P40352 1085 aa2.01□□□□□ -2.09
VPS15YBR097W SPT6P23615 1451 aaKnown RBP2.01□□□□□ -2.09
VPS15YBR097W KEX1P09620 729 aa2.01□□□□□ -2.09
VPS15YBR097W RPS0BP46654 252 aaKnown RBP2.01□□□□□ -2.09
VPS15YBR097W ARP5P53946 755 aa2.01□□□□□ -2.09
VPS15YBR097W KEL3Q08979 651 aaPredicted RBP2.01□□□□□ -2.09
VPS15YBR097W UTP9P38882 575 aaKnown RBP2.01□□□□□ -2.09
VPS15YBR097W HOS4P40480 1083 aa2.01□□□□□ -2.09
VPS15YBR097W HPC2Q01448 625 aa2.01□□□□□ -2.09
VPS15YBR097W MMS22Q06164 1454 aa2□□□□□ -2.09
VPS15YBR097W SPT5P27692 1063 aaKnown RBP2□□□□□ -2.09
VPS15YBR097W YNR021WP53723 404 aaKnown RBP2□□□□□ -2.09
VPS15YBR097W MEI5P32489 222 aa2□□□□□ -2.09
VPS15YBR097W GDT1P38301 280 aaPredicted RBP2□□□□□ -2.09
VPS15YBR097W SPT8P38915 602 aa2□□□□□ -2.09
VPS15YBR097W VPS72Q03388 795 aa2□□□□□ -2.09
VPS15YBR097W JIP3O13555 125 aa2□□□□□ -2.09
VPS15YBR097W SRB7P47822 140 aa2□□□□□ -2.09
VPS15YBR097W SYH1Q02875 849 aaKnown RBP2□□□□□ -2.09
VPS15YBR097W VHS3Q08438 674 aa2□□□□□ -2.09
VPS15YBR097W RTP1Q12751 981 aa2□□□□□ -2.09
VPS15YBR097W GDB1Q06625 1536 aa2□□□□□ -2.09
VPS15YBR097W TRM732Q03496 1420 aa1.99□□□□□ -2.09
VPS15YBR097W PDI1P17967 522 aaKnown RBP1.99□□□□□ -2.09
VPS15YBR097W NOC3Q07896 663 aaPredicted RBP1.99□□□□□ -2.09
VPS15YBR097W HIF1Q12373 385 aa1.99□□□□□ -2.09
VPS15YBR097W EAF7P53911 425 aaKnown RBP1.99□□□□□ -2.09
VPS15YBR097W NOG1Q02892 647 aaKnown RBP1.99□□□□□ -2.09
VPS15YBR097W MDM38Q08179 573 aa1.99□□□□□ -2.09
VPS15YBR097W NSR1P27476 414 aaKnown RBP RIP-Chip data1.98□□□□□ -2.09not detected
VPS15YBR097W DID4P36108 232 aa1.98□□□□□ -2.09
VPS15YBR097W SET2P46995 733 aaKnown RBP1.98□□□□□ -2.09
VPS15YBR097W GPN2Q08726 347 aaPredicted RBP1.98□□□□□ -2.09
VPS15YBR097W GLE1Q12315 538 aa1.98□□□□□ -2.09
VPS15YBR097W XRN1P22147 1528 aaKnown RBP1.98□□□□□ -2.09
VPS15YBR097W SPT2P06843 333 aaPredicted RBP1.98□□□□□ -2.09
VPS15YBR097W VMS1Q04311 632 aaKnown RBP1.98□□□□□ -2.09
VPS15YBR097W ECM5Q03214 1411 aa1.98□□□□□ -2.09
VPS15YBR097W YRF1-1P0CX20 1796 aa1.98□□□□□ -2.09
VPS15YBR097W YRF1-5P0CX21 1796 aa1.98□□□□□ -2.09
VPS15YBR097W YRF1-8P0CX22 1796 aa1.98□□□□□ -2.09
VPS15YBR097W NPL6P32832 435 aa1.98□□□□□ -2.09
VPS15YBR097W SKI2P35207 1287 aaKnown RBP RIP-Chip data1.98□□□□□ -2.09not detected
VPS15YBR097W NMD3P38861 518 aaKnown RBP1.98□□□□□ -2.09
VPS15YBR097W ULS1Q08562 1619 aa1.98□□□□□ -2.09
VPS15YBR097W RPO21P04050 1733 aaKnown RBP1.97□□□□□ -2.09
Retrieved 100 of 5,963 RNA–protein pairs in 15.4 ms