RNA–Protein interactions for RNA: YAL009W

SPO7, Transcript of Putative regulatory subunit of Nem1p-Spo7p phosphatase holoenzyme, yeastyeast

Gene SPO7, Length 780 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPO7YAL009W MET5P47169 1442 aa9.8□□□□□ -0.84
SPO7YAL009W TY2B-LR1P0C2J3 1770 aa9.78□□□□□ -0.84
SPO7YAL009W TY2B-FP0CX63 1770 aa9.78□□□□□ -0.84
SPO7YAL009W TY2B-GR2P0CX64 1770 aa9.78□□□□□ -0.84
SPO7YAL009W TY2B-CP25384 1770 aa9.78□□□□□ -0.84
SPO7YAL009W TY2B-DR2Q03494 1770 aa9.78□□□□□ -0.84
SPO7YAL009W TY1B-DR1Q03855 1755 aa9.78□□□□□ -0.84
SPO7YAL009W TY2B-DR3Q07791 1770 aaKnown RBP9.78□□□□□ -0.84
SPO7YAL009W TY2B-OR1Q12113 1770 aa9.78□□□□□ -0.84
SPO7YAL009W TY2B-DR1Q12472 1770 aa9.78□□□□□ -0.84
SPO7YAL009W TY2B-OR2Q12501 1770 aa9.78□□□□□ -0.84
SPO7YAL009W VNX1P42839 908 aa9.78□□□□□ -0.84
SPO7YAL009W POL1P13382 1468 aa9.75□□□□□ -0.85
SPO7YAL009W MMS22Q06164 1454 aa9.73□□□□□ -0.85
SPO7YAL009W TY1B-BRQ12193 1756 aa9.73□□□□□ -0.85
SPO7YAL009W TY1B-GR3Q12316 1755 aa9.73□□□□□ -0.85
SPO7YAL009W TY1B-ORQ92393 1755 aa9.73□□□□□ -0.85
SPO7YAL009W RKR1Q04781 1562 aa9.72□□□□□ -0.85
SPO7YAL009W RCR1P38212 213 aa9.72□□□□□ -0.85
SPO7YAL009W VPS29P38759 282 aa9.72□□□□□ -0.85
SPO7YAL009W GTT3P39996 337 aa9.71□□□□□ -0.86
SPO7YAL009W STU1P38198 1513 aa9.69□□□□□ -0.86
SPO7YAL009W YFR006WP43590 535 aa9.69□□□□□ -0.86
SPO7YAL009W ESC1Q03661 1658 aaKnown RBP9.69□□□□□ -0.86
SPO7YAL009W RTG3P38165 486 aa9.68□□□□□ -0.86
SPO7YAL009W SPP1Q03012 353 aa9.68□□□□□ -0.86
SPO7YAL009W LTE1P07866 1435 aa9.67□□□□□ -0.86
SPO7YAL009W YOR1P53049 1477 aa9.66□□□□□ -0.86
SPO7YAL009W SMC4Q12267 1418 aa9.66□□□□□ -0.86
SPO7YAL009W TRM732Q03496 1420 aa9.65□□□□□ -0.86
SPO7YAL009W TY2B-BQ12491 1770 aa9.65□□□□□ -0.86
SPO7YAL009W RPA190P10964 1664 aaKnown RBP9.65□□□□□ -0.86
SPO7YAL009W DBP1P24784 617 aaKnown RBP9.64□□□□□ -0.87
SPO7YAL009W YMR1P47147 688 aaKnown RBP RIP-Chip data9.64□□□□□ -0.87not detected
SPO7YAL009W TY1B-DR3Q99231 1755 aa9.64□□□□□ -0.87
SPO7YAL009W SPP41P38904 1435 aa9.64□□□□□ -0.87
SPO7YAL009W TY1B-HO13535 1793 aa9.63□□□□□ -0.87
SPO7YAL009W TY1B-DR5P0C2I2 1755 aa9.63□□□□□ -0.87
SPO7YAL009W TY1B-DR6P0C2I3 1755 aa9.63□□□□□ -0.87
SPO7YAL009W TY1B-LR2P0C2I5 1755 aa9.63□□□□□ -0.87
SPO7YAL009W TY1B-LR3P0C2I6 1755 aaKnown RBP9.63□□□□□ -0.87
SPO7YAL009W TY1B-PR1P0C2I9 1755 aaKnown RBP9.63□□□□□ -0.87
SPO7YAL009W TY1B-PR2P0C2J0 1756 aa9.63□□□□□ -0.87
SPO7YAL009W TY1B-PR3P0C2J1 1755 aaKnown RBP9.63□□□□□ -0.87
SPO7YAL009W TY1B-JR1P47098 1755 aa9.63□□□□□ -0.87
SPO7YAL009W TY1B-ML2Q03434 1755 aaKnown RBP9.63□□□□□ -0.87
SPO7YAL009W TY1B-ER1Q03612 1755 aa9.63□□□□□ -0.87
SPO7YAL009W TY1B-ML1Q04711 1755 aaKnown RBP9.63□□□□□ -0.87
SPO7YAL009W TY1B-GR2Q12269 1755 aa9.63□□□□□ -0.87
SPO7YAL009W TY1B-OLQ12273 1755 aa9.63□□□□□ -0.87
SPO7YAL009W TY1B-PLQ12414 1755 aaKnown RBP9.63□□□□□ -0.87
SPO7YAL009W STS1P38637 319 aa9.63□□□□□ -0.87
SPO7YAL009W ITT1Q04638 464 aa9.62□□□□□ -0.87
SPO7YAL009W TIF11P38912 153 aaKnown RBP9.58□□□□□ -0.88
SPO7YAL009W TSC11P40061 1430 aa9.57□□□□□ -0.88
SPO7YAL009W NUP159P40477 1460 aa9.57□□□□□ -0.88
SPO7YAL009W GEA2P39993 1459 aaKnown RBP9.54□□□□□ -0.88
SPO7YAL009W BNI1P41832 1953 aa9.54□□□□□ -0.88
SPO7YAL009W MIF2P35201 549 aa9.53□□□□□ -0.88
SPO7YAL009W SET4P42948 560 aa9.51□□□□□ -0.89
SPO7YAL009W VTH1P40438 1549 aa9.51□□□□□ -0.89
SPO7YAL009W VTH2P40890 1549 aa9.51□□□□□ -0.89
SPO7YAL009W VMA1P17255 1071 aaKnown RBP9.5□□□□□ -0.89
SPO7YAL009W ULI1P43604 169 aa9.5□□□□□ -0.89
SPO7YAL009W YOL036WQ08206 761 aa9.5□□□□□ -0.89
SPO7YAL009W VPS15P22219 1454 aa9.48□□□□□ -0.89
SPO7YAL009W IOC2Q12072 812 aa9.48□□□□□ -0.89
SPO7YAL009W LDB19Q12502 818 aa9.47□□□□□ -0.89
SPO7YAL009W YTA7P40340 1379 aa9.47□□□□□ -0.89
SPO7YAL009W YRF1-1P0CX20 1796 aa9.46□□□□□ -0.9
SPO7YAL009W YRF1-5P0CX21 1796 aa9.46□□□□□ -0.9
SPO7YAL009W YRF1-8P0CX22 1796 aa9.46□□□□□ -0.9
SPO7YAL009W MYO4P32492 1471 aa9.46□□□□□ -0.9
SPO7YAL009W DRS2P39524 1355 aa9.45□□□□□ -0.9
SPO7YAL009W MMS1Q06211 1407 aa9.45□□□□□ -0.9
SPO7YAL009W TY1B-JR2P47100 1755 aaKnown RBP9.45□□□□□ -0.9
SPO7YAL009W TY1B-ER2Q03619 1755 aa9.45□□□□□ -0.9
SPO7YAL009W TY1B-MR1Q04214 1755 aa9.45□□□□□ -0.9
SPO7YAL009W TY1B-MR2Q04670 1755 aaKnown RBP9.45□□□□□ -0.9
SPO7YAL009W TY1B-LR1Q12088 1755 aaKnown RBP9.45□□□□□ -0.9
SPO7YAL009W TY1B-NL1Q12112 1755 aa9.45□□□□□ -0.9
SPO7YAL009W TY1B-GR1Q12141 1755 aa9.45□□□□□ -0.9
SPO7YAL009W TY1B-BLQ12490 1755 aa9.45□□□□□ -0.9
SPO7YAL009W AIR2Q12476 344 aaKnown RBP9.44□□□□□ -0.9
SPO7YAL009W ABP1P15891 592 aaKnown RBP9.43□□□□□ -0.9
SPO7YAL009W FKH1P40466 484 aa9.43□□□□□ -0.9
SPO7YAL009W SNT2P53127 1403 aa9.41□□□□□ -0.9
SPO7YAL009W MSB4Q12317 492 aa9.41□□□□□ -0.9
SPO7YAL009W RAM2P29703 316 aa9.4□□□□□ -0.9
SPO7YAL009W SAM3Q08986 587 aa9.4□□□□□ -0.9
SPO7YAL009W SNQ2P32568 1501 aaKnown RBP9.4□□□□□ -0.91
SPO7YAL009W NTE1Q04958 1679 aa9.39□□□□□ -0.91
SPO7YAL009W TRP5P00931 707 aaKnown RBP9.39□□□□□ -0.91
SPO7YAL009W MET10P39692 1035 aa9.39□□□□□ -0.91
SPO7YAL009W STH1P32597 1359 aa9.37□□□□□ -0.91
SPO7YAL009W RPO21P04050 1733 aaKnown RBP9.36□□□□□ -0.91
SPO7YAL009W EAP1P36041 632 aaKnown RBP9.35□□□□□ -0.91
SPO7YAL009W RTT106P40161 455 aa9.34□□□□□ -0.91
SPO7YAL009W RTG1P32607 177 aa9.31□□□□□ -0.92
SPO7YAL009W YJL171CP46992 396 aa9.3□□□□□ -0.92
Retrieved 100 of 5,963 RNA–protein pairs in 7.9 ms