RNA–Protein interactions for RNA: ENST00000641696.1

CASC19-250, Transcript of cancer susceptibility 19, humanhuman

Gene CASC19, Length 886 nt, Biotype lincRNA.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-250ENST00000641696 TRHP20396 242 aaPredicted RBP12.5□□□□□ -0.41
CASC19-250ENST00000641696 POLA1P09884 1462 aaPredicted RBP12.5□□□□□ -0.41
CASC19-250ENST00000641696 WDR97A6NE52 1622 aa12.47□□□□□ -0.41
CASC19-250ENST00000641696 CAPN15O75808 1086 aa12.46□□□□□ -0.41
CASC19-250ENST00000641696 TARBP1Q13395 1621 aaKnown RBP12.44□□□□□ -0.42
CASC19-250ENST00000641696 CUX2O14529 1486 aa12.43□□□□□ -0.42
CASC19-250ENST00000641696 SOGA1O94964 1423 aa12.43□□□□□ -0.42
CASC19-250ENST00000641696 ABCA10Q8WWZ4 1543 aa12.42□□□□□ -0.42
CASC19-250ENST00000641696 IFT140Q96RY7 1462 aa12.41□□□□□ -0.42
CASC19-250ENST00000641696 RAD54L2Q9Y4B4 1467 aa12.41□□□□□ -0.42
CASC19-250ENST00000641696 EEA1Q15075 1411 aa12.39□□□□□ -0.43
CASC19-250ENST00000641696 KIF27Q86VH2 1401 aa12.37□□□□□ -0.43
CASC19-250ENST00000641696 ABCA5Q8WWZ7 1642 aa12.37□□□□□ -0.43
CASC19-250ENST00000641696 RUSC2Q8N2Y8 1516 aa12.36□□□□□ -0.43
CASC19-250ENST00000641696 POLA2Q14181 598 aa12.35□□□□□ -0.43
CASC19-250ENST00000641696 PBRM1Q86U86 1689 aa12.32□□□□□ -0.44
CASC19-250ENST00000641696 EIF4G3O43432 1585 aaKnown RBP12.31□□□□□ -0.44
CASC19-250ENST00000641696 MKRN4PQ13434 485 aaPredicted RBP12.31□□□□□ -0.44
CASC19-250ENST00000641696 GAPVD1Q14C86 1478 aa12.31□□□□□ -0.44
CASC19-250ENST00000641696 ZNF608Q9ULD9 1512 aaPredicted RBP12.31□□□□□ -0.44
CASC19-250ENST00000641696 ERICH3Q5RHP9 1530 aa12.29□□□□□ -0.44
CASC19-250ENST00000641696 TDRD9Q8NDG6 1382 aaKnown RBP12.29□□□□□ -0.44
CASC19-250ENST00000641696 ABCB7O75027 752 aa12.28□□□□□ -0.44
CASC19-250ENST00000641696 FBLN2P98095 1184 aa12.28□□□□□ -0.44
CASC19-250ENST00000641696 CUL7Q14999 1698 aa12.27□□□□□ -0.45
CASC19-250ENST00000641696 FAM9AQ8IZU1 332 aaPredicted RBP12.27□□□□□ -0.45
CASC19-250ENST00000641696 AQRO60306 1485 aaKnown RBP eCLIP12.27□□□□□ -0.45
CASC19-250ENST00000641696 KIF21BO75037 1637 aa12.26□□□□□ -0.45
CASC19-250ENST00000641696 IGF1RP08069 1367 aa12.26□□□□□ -0.45
CASC19-250ENST00000641696 GRIN2BQ13224 1484 aa12.26□□□□□ -0.45
CASC19-250ENST00000641696 PRXQ9BXM0 1461 aa12.24□□□□□ -0.45
CASC19-250ENST00000641696 ADAMTS12P58397 1594 aa12.22□□□□□ -0.45
CASC19-250ENST00000641696 SPDYE4A6NLX3 237 aa12.21□□□□□ -0.45
CASC19-250ENST00000641696 MAGI1Q96QZ7 1491 aaPredicted RBP12.21□□□□□ -0.46
CASC19-250ENST00000641696 CARMIL1Q5VZK9 1371 aa12.19□□□□□ -0.46
CASC19-250ENST00000641696 GOLGA3Q08378 1498 aa12.19□□□□□ -0.46
CASC19-250ENST00000641696 SNAPC4Q5SXM2 1469 aa12.19□□□□□ -0.46
CASC19-250ENST00000641696 RAPGEF2Q9Y4G8 1499 aa12.18□□□□□ -0.46
CASC19-250ENST00000641696 FHAD1B1AJZ9 1412 aa12.18□□□□□ -0.46
CASC19-250ENST00000641696 SYNJ2O15056 1496 aa12.14□□□□□ -0.47
CASC19-250ENST00000641696 DSG3P32926 999 aa12.13□□□□□ -0.47
CASC19-250ENST00000641696 ZBTB12Q9Y330 459 aaPredicted RBP12.13□□□□□ -0.47
CASC19-250ENST00000641696 RTN4Q9NQC3 1192 aaKnown RBP12.12□□□□□ -0.47
CASC19-250ENST00000641696 CTTNBP2Q8WZ74 1663 aa12.12□□□□□ -0.47
CASC19-250ENST00000641696 GRIN2AQ12879 1464 aa12.11□□□□□ -0.47
CASC19-250ENST00000641696 LOC105371045A0A1W2PR82 267 aa12.11□□□□□ -0.47
CASC19-250ENST00000641696 AMER1Q5JTC6 1135 aaPredicted RBP12.11□□□□□ -0.47
CASC19-250ENST00000641696 CHD1O14646 1710 aa12.11□□□□□ -0.47
CASC19-250ENST00000641696 TNIKQ9UKE5 1360 aa12.09□□□□□ -0.47
CASC19-250ENST00000641696 UBTFP17480 764 aaKnown RBP12.06□□□□□ -0.48
CASC19-250ENST00000641696 CHMP7Q8WUX9 453 aaPredicted RBP12.05□□□□□ -0.48
CASC19-250ENST00000641696 CEP170Q5SW79 1584 aa12.05□□□□□ -0.48
CASC19-250ENST00000641696 NUP160Q12769 1436 aa12.04□□□□□ -0.48
CASC19-250ENST00000641696 PROM2Q8N271 834 aa12.03□□□□□ -0.48
CASC19-250ENST00000641696 FBXO3Q9UK99 471 aa12.01□□□□□ -0.49
CASC19-250ENST00000641696 KIAA0586Q9BVV6 1533 aa12.01□□□□□ -0.49
CASC19-250ENST00000641696 IQGAP2Q13576 1575 aa12.01□□□□□ -0.49
CASC19-250ENST00000641696 CEP162Q5TB80 1403 aa11.99□□□□□ -0.49
CASC19-250ENST00000641696 CLASP1Q7Z460 1538 aa11.96□□□□□ -0.49
CASC19-250ENST00000641696 UGGT2Q9NYU1 1516 aa11.96□□□□□ -0.49
CASC19-250ENST00000641696 SAMD9Q5K651 1589 aa11.96□□□□□ -0.5
CASC19-250ENST00000641696 EFCAB5A4FU69 1503 aa11.96□□□□□ -0.5
CASC19-250ENST00000641696 CLIP1P30622 1438 aa11.95□□□□□ -0.5
CASC19-250ENST00000641696 SHROOM2Q13796 1616 aa11.94□□□□□ -0.5
CASC19-250ENST00000641696 OSCARQ8IYS5 282 aa11.94□□□□□ -0.5
CASC19-250ENST00000641696 ARHGAP35Q9NRY4 1499 aa11.93□□□□□ -0.5
CASC19-250ENST00000641696 KIAA0556O60303 1618 aa11.89□□□□□ -0.51
CASC19-250ENST00000641696 ZNF692Q9BU19 519 aaPredicted RBP11.89□□□□□ -0.51
CASC19-250ENST00000641696 ARAP1Q96P48 1450 aa11.89□□□□□ -0.51
CASC19-250ENST00000641696 DISP1Q96F81 1524 aa11.88□□□□□ -0.51
CASC19-250ENST00000641696 JPH4Q96JJ6 628 aa11.88□□□□□ -0.51
CASC19-250ENST00000641696 RANGAP1P46060 587 aaPredicted RBP11.86□□□□□ -0.51
CASC19-250ENST00000641696 VASPP50552 380 aaPredicted RBP11.86□□□□□ -0.51
CASC19-250ENST00000641696 SPDYE2BA6NHP3 402 aa11.85□□□□□ -0.51
CASC19-250ENST00000641696 SPDYE6P0CI01 402 aa11.85□□□□□ -0.51
CASC19-250ENST00000641696 SPDYE2Q495Y8 402 aa11.85□□□□□ -0.51
CASC19-250ENST00000641696 CARMIL2Q6F5E8 1435 aa11.85□□□□□ -0.51
CASC19-250ENST00000641696 FHOD3Q2V2M9 1422 aa11.84□□□□□ -0.51
CASC19-250ENST00000641696 PRG4Q92954 1404 aaPredicted RBP11.84□□□□□ -0.51
CASC19-250ENST00000641696 VPS8Q8N3P4 1428 aa11.83□□□□□ -0.52
CASC19-250ENST00000641696 ERCC6L2Q5T890 1561 aa11.81□□□□□ -0.52
CASC19-250ENST00000641696 FMN1Q68DA7 1419 aa11.81□□□□□ -0.52
CASC19-250ENST00000641696 P3H3Q8IVL6 736 aa11.8□□□□□ -0.52
CASC19-250ENST00000641696 SSUH2Q9Y2M2 353 aa11.8□□□□□ -0.52
CASC19-250ENST00000641696 PCF11O94913 1555 aaKnown RBP11.79□□□□□ -0.52
CASC19-250ENST00000641696 CASKIN1Q8WXD9 1431 aa11.77□□□□□ -0.53
CASC19-250ENST00000641696 FYCO1Q9BQS8 1478 aa11.76□□□□□ -0.53
CASC19-250ENST00000641696 RAPGEF6Q8TEU7 1601 aa11.75□□□□□ -0.53
CASC19-250ENST00000641696 ABCA8O94911 1581 aa11.75□□□□□ -0.53
CASC19-250ENST00000641696 LRRIQ1Q96JM4 1722 aa11.74□□□□□ -0.53
CASC19-250ENST00000641696 PTPRGP23470 1445 aa11.74□□□□□ -0.53
CASC19-250ENST00000641696 HECW1Q76N89 1606 aa11.74□□□□□ -0.53
CASC19-250ENST00000641696 ARHGEF11O15085 1522 aa11.73□□□□□ -0.53
CASC19-250ENST00000641696 IFNLR1Q8IU57 520 aaPredicted RBP11.73□□□□□ -0.53
CASC19-250ENST00000641696 CFAP43Q8NDM7 1665 aa11.73□□□□□ -0.53
CASC19-250ENST00000641696 MAP3K1Q13233 1512 aa11.72□□□□□ -0.53
CASC19-250ENST00000641696 RIMBP3CA6NJZ7 1639 aa11.71□□□□□ -0.53
CASC19-250ENST00000641696 RIMBP3BA6NNM3 1639 aa11.71□□□□□ -0.53
CASC19-250ENST00000641696 RIMBP3Q9UFD9 1639 aa11.71□□□□□ -0.53
CASC19-250ENST00000641696 PLB1Q6P1J6 1458 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms