RNA–Protein interactions for RNA: ENST00000641106.1

CASC19-211, Transcript of cancer susceptibility 19, humanhuman

Gene CASC19, Length 1,184 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-211ENST00000641106 WIZO95785 1651 aa13.78□□□□□ -0.2
CASC19-211ENST00000641106 THOC2Q8NI27 1593 aaKnown RBP13.77□□□□□ -0.21
CASC19-211ENST00000641106 LAMC3Q9Y6N6 1575 aa13.76□□□□□ -0.21
CASC19-211ENST00000641106 KIF21AQ7Z4S6 1674 aa13.74□□□□□ -0.21
CASC19-211ENST00000641106 DNAJC5Q9H3Z4 198 aa13.73□□□□□ -0.21
CASC19-211ENST00000641106 C19orf67A6NJJ6 358 aa13.72□□□□□ -0.21
CASC19-211ENST00000641106 CHADLQ6NUI6 762 aa13.71□□□□□ -0.21
CASC19-211ENST00000641106 PRR29P0C7W0 189 aa13.7□□□□□ -0.22
CASC19-211ENST00000641106 SLC24A1O60721 1099 aa13.65□□□□□ -0.22
CASC19-211ENST00000641106 RSF1Q96T23 1441 aaPredicted RBP13.63□□□□□ -0.23
CASC19-211ENST00000641106 CADPSQ9ULU8 1353 aa13.62□□□□□ -0.23
CASC19-211ENST00000641106 PDS5BQ9NTI5 1447 aa13.61□□□□□ -0.23
CASC19-211ENST00000641106 TOP2AP11388 1531 aaKnown RBP13.58□□□□□ -0.24
CASC19-211ENST00000641106 WDR62O43379 1518 aa13.55□□□□□ -0.24
CASC19-211ENST00000641106 GABBR2O75899 941 aa13.55□□□□□ -0.24
CASC19-211ENST00000641106 MRC2Q9UBG0 1479 aa13.55□□□□□ -0.24
CASC19-211ENST00000641106 CFTRP13569 1480 aa13.51□□□□□ -0.25
CASC19-211ENST00000641106 FARP1Q9Y4F1 1045 aaPredicted RBP13.5□□□□□ -0.25
CASC19-211ENST00000641106 CEP164Q9UPV0 1460 aa13.49□□□□□ -0.25
CASC19-211ENST00000641106 FANCD2Q9BXW9 1451 aa13.48□□□□□ -0.25
CASC19-211ENST00000641106 AMER1Q5JTC6 1135 aaPredicted RBP13.48□□□□□ -0.25
CASC19-211ENST00000641106 PRDM2Q13029 1718 aa13.46□□□□□ -0.25
CASC19-211ENST00000641106 CD44P16070 742 aaKnown RBP13.43□□□□□ -0.26
CASC19-211ENST00000641106 RTN4Q9NQC3 1192 aaKnown RBP13.42□□□□□ -0.26
CASC19-211ENST00000641106 URB2Q14146 1524 aaKnown RBP13.42□□□□□ -0.26
CASC19-211ENST00000641106 SPDYE4A6NLX3 237 aa13.4□□□□□ -0.26
CASC19-211ENST00000641106 CCDC88BA6NC98 1476 aa13.4□□□□□ -0.26
CASC19-211ENST00000641106 STAG3Q9UJ98 1225 aa13.37□□□□□ -0.27
CASC19-211ENST00000641106 CREBZFQ9NS37 354 aa13.36□□□□□ -0.27
CASC19-211ENST00000641106 POTEIP0CG38 1075 aa13.27□□□□□ -0.29
CASC19-211ENST00000641106 LHX8Q68G74 356 aa13.27□□□□□ -0.29
CASC19-211ENST00000641106 CLCN6P51797 869 aa13.26□□□□□ -0.29
CASC19-211ENST00000641106 TOPBP1Q92547 1522 aa13.26□□□□□ -0.29
CASC19-211ENST00000641106 ZNF608Q9ULD9 1512 aaPredicted RBP13.23□□□□□ -0.29
CASC19-211ENST00000641106 ZRANB1Q9UGI0 708 aa13.23□□□□□ -0.29
CASC19-211ENST00000641106 DNMBPQ6XZF7 1577 aa13.23□□□□□ -0.29
CASC19-211ENST00000641106 ZNF579Q8NAF0 562 aaKnown RBP13.22□□□□□ -0.29
CASC19-211ENST00000641106 IFT140Q96RY7 1462 aa13.22□□□□□ -0.29
CASC19-211ENST00000641106 EIF4G3O43432 1585 aaKnown RBP13.19□□□□□ -0.3
CASC19-211ENST00000641106 TARBP1Q13395 1621 aaKnown RBP13.18□□□□□ -0.3
CASC19-211ENST00000641106 ABCC8Q09428 1581 aa13.16□□□□□ -0.3
CASC19-211ENST00000641106 POLA1P09884 1462 aaPredicted RBP13.13□□□□□ -0.31
CASC19-211ENST00000641106 DCBLD2Q96PD2 775 aa13.13□□□□□ -0.31
CASC19-211ENST00000641106 MNX1P50219 401 aaPredicted RBP13.12□□□□□ -0.31
CASC19-211ENST00000641106 TRIM41Q8WV44 630 aa13.11□□□□□ -0.31
CASC19-211ENST00000641106 CHD1O14646 1710 aa13.1□□□□□ -0.31
CASC19-211ENST00000641106 GALR2O43603 387 aaPredicted RBP13.09□□□□□ -0.31
CASC19-211ENST00000641106 RIMBP3CA6NJZ7 1639 aa13.09□□□□□ -0.31
CASC19-211ENST00000641106 RIMBP3BA6NNM3 1639 aa13.09□□□□□ -0.31
CASC19-211ENST00000641106 RIMBP3Q9UFD9 1639 aa13.09□□□□□ -0.31
CASC19-211ENST00000641106 AQRO60306 1485 aaKnown RBP eCLIP13.09□□□□□ -0.313e-6■■■■□ 24.7
CASC19-211ENST00000641106 PROM2Q8N271 834 aa13.08□□□□□ -0.32
CASC19-211ENST00000641106 RAD54L2Q9Y4B4 1467 aa13.08□□□□□ -0.32
CASC19-211ENST00000641106 CUX1P39880 1505 aa13.08□□□□□ -0.32
CASC19-211ENST00000641106 NPM1P06748 294 aaKnown RBP eCLIP13.07□□□□□ -0.32
CASC19-211ENST00000641106 FGD5Q6ZNL6 1462 aa13.06□□□□□ -0.32
CASC19-211ENST00000641106 PAK3O75914 559 aaPredicted RBP13.06□□□□□ -0.32
CASC19-211ENST00000641106 PHF12Q96QT6 1004 aa13.05□□□□□ -0.32
CASC19-211ENST00000641106 WDR97A6NE52 1622 aa13.05□□□□□ -0.32
CASC19-211ENST00000641106 FKBP8Q14318 412 aa13.04□□□□□ -0.32
CASC19-211ENST00000641106 ARHGEF11O15085 1522 aa13.03□□□□□ -0.32
CASC19-211ENST00000641106 SOGA1O94964 1423 aa13.02□□□□□ -0.33
CASC19-211ENST00000641106 TDRD9Q8NDG6 1382 aaKnown RBP13□□□□□ -0.33
CASC19-211ENST00000641106 SNAPC4Q5SXM2 1469 aa12.97□□□□□ -0.33
CASC19-211ENST00000641106 SUPT5HO00267 1087 aaKnown RBP12.96□□□□□ -0.33
CASC19-211ENST00000641106 PBRM1Q86U86 1689 aa12.96□□□□□ -0.34
CASC19-211ENST00000641106 CLASP1Q7Z460 1538 aa12.94□□□□□ -0.34
CASC19-211ENST00000641106 ABCA5Q8WWZ7 1642 aa12.93□□□□□ -0.34
CASC19-211ENST00000641106 ARAP1Q96P48 1450 aa12.92□□□□□ -0.34
CASC19-211ENST00000641106 GRIN2BQ13224 1484 aa12.91□□□□□ -0.34
CASC19-211ENST00000641106 MAGI1Q96QZ7 1491 aaPredicted RBP12.91□□□□□ -0.34
CASC19-211ENST00000641106 BIVM-ERCC5R4GMW8 1640 aa12.91□□□□□ -0.34
CASC19-211ENST00000641106 ABCA10Q8WWZ4 1543 aa12.9□□□□□ -0.34
CASC19-211ENST00000641106 SYNJ1O43426 1573 aa12.89□□□□□ -0.35
CASC19-211ENST00000641106 SYNJ2O15056 1496 aa12.88□□□□□ -0.35
CASC19-211ENST00000641106 GAPVD1Q14C86 1478 aa12.88□□□□□ -0.35
CASC19-211ENST00000641106 TOP2BQ02880 1626 aa12.88□□□□□ -0.35
CASC19-211ENST00000641106 PELP1Q8IZL8 1130 aaKnown RBP12.87□□□□□ -0.35
CASC19-211ENST00000641106 MS4A3Q96HJ5 214 aa12.86□□□□□ -0.35
CASC19-211ENST00000641106 TSPYL2Q9H2G4 693 aaPredicted RBP12.85□□□□□ -0.35
CASC19-211ENST00000641106 POTEB2H3BUK9 544 aa12.84□□□□□ -0.35
CASC19-211ENST00000641106 ADAMTS12P58397 1594 aa12.82□□□□□ -0.36
CASC19-211ENST00000641106 WRNQ14191 1432 aaPredicted RBP eCLIP12.82□□□□□ -0.36
CASC19-211ENST00000641106 CYB5RLQ6IPT4 315 aa12.82□□□□□ -0.36
CASC19-211ENST00000641106 CHMP7Q8WUX9 453 aaPredicted RBP12.81□□□□□ -0.36
CASC19-211ENST00000641106 CCDC61Q9Y6R9 512 aa12.81□□□□□ -0.36
CASC19-211ENST00000641106 ASTLQ6HA08 431 aaPredicted RBP12.8□□□□□ -0.36
CASC19-211ENST00000641106 MIER1Q8N108 512 aa12.8□□□□□ -0.36
CASC19-211ENST00000641106 OTUD5Q96G74 571 aa12.8□□□□□ -0.36
CASC19-211ENST00000641106 ATMINO43313 823 aaPredicted RBP12.78□□□□□ -0.36
CASC19-211ENST00000641106 GRIN2AQ12879 1464 aa12.78□□□□□ -0.36
CASC19-211ENST00000641106 CEP170Q5SW79 1584 aa12.77□□□□□ -0.36
CASC19-211ENST00000641106 PLEKHG5O94827 1062 aa12.76□□□□□ -0.37
CASC19-211ENST00000641106 ERCC6L2Q5T890 1561 aa12.76□□□□□ -0.37
CASC19-211ENST00000641106 KIF12Q96FN5 646 aa12.75□□□□□ -0.37
CASC19-211ENST00000641106 NUP160Q12769 1436 aa12.74□□□□□ -0.37
CASC19-211ENST00000641106 ERICH3Q5RHP9 1530 aa12.73□□□□□ -0.37
CASC19-211ENST00000641106 METRNQ9UJH8 293 aa12.73□□□□□ -0.37
CASC19-211ENST00000641106 SHROOM2Q13796 1616 aa12.73□□□□□ -0.37
CASC19-211ENST00000641106 RASEFQ8IZ41 740 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms