RNA–Protein interactions for RNA: ENST00000641106.1

CASC19-211, Transcript of cancer susceptibility 19, humanhuman

Gene CASC19, Length 1,184 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-211ENST00000641106 WIZO95785 1651 aa13.78□□□□□ -0.2
CASC19-211ENST00000641106 THOC2Q8NI27 1593 aaKnown RBP13.77□□□□□ -0.21
CASC19-211ENST00000641106 LAMC3Q9Y6N6 1575 aa13.76□□□□□ -0.21
CASC19-211ENST00000641106 KIF21AQ7Z4S6 1674 aa13.74□□□□□ -0.21
CASC19-211ENST00000641106 DNAJC5Q9H3Z4 198 aa13.73□□□□□ -0.21
CASC19-211ENST00000641106 C19orf67A6NJJ6 358 aa13.72□□□□□ -0.21
CASC19-211ENST00000641106 CHADLQ6NUI6 762 aa13.71□□□□□ -0.21
CASC19-211ENST00000641106 PRR29P0C7W0 189 aa13.7□□□□□ -0.22
CASC19-211ENST00000641106 SLC24A1O60721 1099 aa13.65□□□□□ -0.22
CASC19-211ENST00000641106 RSF1Q96T23 1441 aaPredicted RBP13.63□□□□□ -0.23
CASC19-211ENST00000641106 CADPSQ9ULU8 1353 aa13.62□□□□□ -0.23
CASC19-211ENST00000641106 PDS5BQ9NTI5 1447 aa13.61□□□□□ -0.23
CASC19-211ENST00000641106 TOP2AP11388 1531 aaKnown RBP13.58□□□□□ -0.24
CASC19-211ENST00000641106 WDR62O43379 1518 aa13.55□□□□□ -0.24
CASC19-211ENST00000641106 GABBR2O75899 941 aa13.55□□□□□ -0.24
CASC19-211ENST00000641106 MRC2Q9UBG0 1479 aa13.55□□□□□ -0.24
CASC19-211ENST00000641106 CFTRP13569 1480 aa13.51□□□□□ -0.25
CASC19-211ENST00000641106 FARP1Q9Y4F1 1045 aaPredicted RBP13.5□□□□□ -0.25
CASC19-211ENST00000641106 CEP164Q9UPV0 1460 aa13.49□□□□□ -0.25
CASC19-211ENST00000641106 FANCD2Q9BXW9 1451 aa13.48□□□□□ -0.25
CASC19-211ENST00000641106 AMER1Q5JTC6 1135 aaPredicted RBP13.48□□□□□ -0.25
CASC19-211ENST00000641106 PRDM2Q13029 1718 aa13.46□□□□□ -0.25
CASC19-211ENST00000641106 CD44P16070 742 aaKnown RBP13.43□□□□□ -0.26
CASC19-211ENST00000641106 RTN4Q9NQC3 1192 aaKnown RBP13.42□□□□□ -0.26
CASC19-211ENST00000641106 URB2Q14146 1524 aaKnown RBP13.42□□□□□ -0.26
CASC19-211ENST00000641106 SPDYE4A6NLX3 237 aa13.4□□□□□ -0.26
CASC19-211ENST00000641106 CCDC88BA6NC98 1476 aa13.4□□□□□ -0.26
CASC19-211ENST00000641106 STAG3Q9UJ98 1225 aa13.37□□□□□ -0.27
CASC19-211ENST00000641106 CREBZFQ9NS37 354 aa13.36□□□□□ -0.27
CASC19-211ENST00000641106 POTEIP0CG38 1075 aa13.27□□□□□ -0.29
CASC19-211ENST00000641106 LHX8Q68G74 356 aa13.27□□□□□ -0.29
CASC19-211ENST00000641106 CLCN6P51797 869 aa13.26□□□□□ -0.29
CASC19-211ENST00000641106 TOPBP1Q92547 1522 aa13.26□□□□□ -0.29
CASC19-211ENST00000641106 ZNF608Q9ULD9 1512 aaPredicted RBP13.23□□□□□ -0.29
CASC19-211ENST00000641106 ZRANB1Q9UGI0 708 aa13.23□□□□□ -0.29
CASC19-211ENST00000641106 DNMBPQ6XZF7 1577 aa13.23□□□□□ -0.29
CASC19-211ENST00000641106 ZNF579Q8NAF0 562 aaKnown RBP13.22□□□□□ -0.29
CASC19-211ENST00000641106 IFT140Q96RY7 1462 aa13.22□□□□□ -0.29
CASC19-211ENST00000641106 EIF4G3O43432 1585 aaKnown RBP13.19□□□□□ -0.3
CASC19-211ENST00000641106 TARBP1Q13395 1621 aaKnown RBP13.18□□□□□ -0.3
CASC19-211ENST00000641106 ABCC8Q09428 1581 aa13.16□□□□□ -0.3
CASC19-211ENST00000641106 POLA1P09884 1462 aaPredicted RBP13.13□□□□□ -0.31
CASC19-211ENST00000641106 DCBLD2Q96PD2 775 aa13.13□□□□□ -0.31
CASC19-211ENST00000641106 MNX1P50219 401 aaPredicted RBP13.12□□□□□ -0.31
CASC19-211ENST00000641106 TRIM41Q8WV44 630 aa13.11□□□□□ -0.31
CASC19-211ENST00000641106 CHD1O14646 1710 aa13.1□□□□□ -0.31
CASC19-211ENST00000641106 GALR2O43603 387 aaPredicted RBP13.09□□□□□ -0.31
CASC19-211ENST00000641106 RIMBP3CA6NJZ7 1639 aa13.09□□□□□ -0.31
CASC19-211ENST00000641106 RIMBP3BA6NNM3 1639 aa13.09□□□□□ -0.31
CASC19-211ENST00000641106 RIMBP3Q9UFD9 1639 aa13.09□□□□□ -0.31
CASC19-211ENST00000641106 AQRO60306 1485 aaKnown RBP eCLIP13.09□□□□□ -0.313e-6■■■■□ 24.7
CASC19-211ENST00000641106 PROM2Q8N271 834 aa13.08□□□□□ -0.32
CASC19-211ENST00000641106 RAD54L2Q9Y4B4 1467 aa13.08□□□□□ -0.32
CASC19-211ENST00000641106 CUX1P39880 1505 aa13.08□□□□□ -0.32
CASC19-211ENST00000641106 NPM1P06748 294 aaKnown RBP eCLIP13.07□□□□□ -0.32
CASC19-211ENST00000641106 FGD5Q6ZNL6 1462 aa13.06□□□□□ -0.32
CASC19-211ENST00000641106 PAK3O75914 559 aaPredicted RBP13.06□□□□□ -0.32
CASC19-211ENST00000641106 PHF12Q96QT6 1004 aa13.05□□□□□ -0.32
CASC19-211ENST00000641106 WDR97A6NE52 1622 aa13.05□□□□□ -0.32
CASC19-211ENST00000641106 FKBP8Q14318 412 aa13.04□□□□□ -0.32
CASC19-211ENST00000641106 ARHGEF11O15085 1522 aa13.03□□□□□ -0.32
CASC19-211ENST00000641106 SOGA1O94964 1423 aa13.02□□□□□ -0.33
CASC19-211ENST00000641106 TDRD9Q8NDG6 1382 aaKnown RBP13□□□□□ -0.33
CASC19-211ENST00000641106 SNAPC4Q5SXM2 1469 aa12.97□□□□□ -0.33
CASC19-211ENST00000641106 SUPT5HO00267 1087 aaKnown RBP12.96□□□□□ -0.33
CASC19-211ENST00000641106 PBRM1Q86U86 1689 aa12.96□□□□□ -0.34
CASC19-211ENST00000641106 CLASP1Q7Z460 1538 aa12.94□□□□□ -0.34
CASC19-211ENST00000641106 ABCA5Q8WWZ7 1642 aa12.93□□□□□ -0.34
CASC19-211ENST00000641106 ARAP1Q96P48 1450 aa12.92□□□□□ -0.34
CASC19-211ENST00000641106 GRIN2BQ13224 1484 aa12.91□□□□□ -0.34
CASC19-211ENST00000641106 MAGI1Q96QZ7 1491 aaPredicted RBP12.91□□□□□ -0.34
CASC19-211ENST00000641106 BIVM-ERCC5R4GMW8 1640 aa12.91□□□□□ -0.34
CASC19-211ENST00000641106 ABCA10Q8WWZ4 1543 aa12.9□□□□□ -0.34
CASC19-211ENST00000641106 SYNJ1O43426 1573 aa12.89□□□□□ -0.35
CASC19-211ENST00000641106 SYNJ2O15056 1496 aa12.88□□□□□ -0.35
CASC19-211ENST00000641106 GAPVD1Q14C86 1478 aa12.88□□□□□ -0.35
CASC19-211ENST00000641106 TOP2BQ02880 1626 aa12.88□□□□□ -0.35
CASC19-211ENST00000641106 PELP1Q8IZL8 1130 aaKnown RBP12.87□□□□□ -0.35
CASC19-211ENST00000641106 MS4A3Q96HJ5 214 aa12.86□□□□□ -0.35
CASC19-211ENST00000641106 TSPYL2Q9H2G4 693 aaPredicted RBP12.85□□□□□ -0.35
CASC19-211ENST00000641106 POTEB2H3BUK9 544 aa12.84□□□□□ -0.35
CASC19-211ENST00000641106 ADAMTS12P58397 1594 aa12.82□□□□□ -0.36
CASC19-211ENST00000641106 WRNQ14191 1432 aaPredicted RBP eCLIP12.82□□□□□ -0.36
CASC19-211ENST00000641106 CYB5RLQ6IPT4 315 aa12.82□□□□□ -0.36
CASC19-211ENST00000641106 CHMP7Q8WUX9 453 aaPredicted RBP12.81□□□□□ -0.36
CASC19-211ENST00000641106 CCDC61Q9Y6R9 512 aa12.81□□□□□ -0.36
CASC19-211ENST00000641106 ASTLQ6HA08 431 aaPredicted RBP12.8□□□□□ -0.36
CASC19-211ENST00000641106 MIER1Q8N108 512 aa12.8□□□□□ -0.36
CASC19-211ENST00000641106 OTUD5Q96G74 571 aa12.8□□□□□ -0.36
CASC19-211ENST00000641106 ATMINO43313 823 aaPredicted RBP12.78□□□□□ -0.36
CASC19-211ENST00000641106 GRIN2AQ12879 1464 aa12.78□□□□□ -0.36
CASC19-211ENST00000641106 CEP170Q5SW79 1584 aa12.77□□□□□ -0.36
CASC19-211ENST00000641106 PLEKHG5O94827 1062 aa12.76□□□□□ -0.37
CASC19-211ENST00000641106 ERCC6L2Q5T890 1561 aa12.76□□□□□ -0.37
CASC19-211ENST00000641106 KIF12Q96FN5 646 aa12.75□□□□□ -0.37
CASC19-211ENST00000641106 NUP160Q12769 1436 aa12.74□□□□□ -0.37
CASC19-211ENST00000641106 ERICH3Q5RHP9 1530 aa12.73□□□□□ -0.37
CASC19-211ENST00000641106 METRNQ9UJH8 293 aa12.73□□□□□ -0.37
CASC19-211ENST00000641106 SHROOM2Q13796 1616 aa12.73□□□□□ -0.37
CASC19-211ENST00000641106 RASEFQ8IZ41 740 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms