RNA–Protein interactions for RNA: ENST00000640341.1

SCARB2-221, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 3,403 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-221ENST00000640341 PHLDB1Q86UU1 1377 aa20.93■□□□□ 0.94
SCARB2-221ENST00000640341 CADPSQ9ULU8 1353 aa20.92■□□□□ 0.94
SCARB2-221ENST00000640341 FGD5Q6ZNL6 1462 aa20.91■□□□□ 0.94
SCARB2-221ENST00000640341 FHOD3Q2V2M9 1422 aa20.87■□□□□ 0.93
SCARB2-221ENST00000640341 SETD5Q9C0A6 1442 aa20.87■□□□□ 0.93
SCARB2-221ENST00000640341 RAD54L2Q9Y4B4 1467 aa20.82■□□□□ 0.92
SCARB2-221ENST00000640341 LRRC9Q6ZRR7 1453 aa20.82■□□□□ 0.92
SCARB2-221ENST00000640341 TIAM1Q13009 1591 aa20.79■□□□□ 0.92
SCARB2-221ENST00000640341 TRIM52Q96A61 297 aa20.79■□□□□ 0.92
SCARB2-221ENST00000640341 ARID3CA6NKF2 412 aa20.78■□□□□ 0.92
SCARB2-221ENST00000640341 MAPKBP1O60336 1514 aa20.77■□□□□ 0.91
SCARB2-221ENST00000640341 FHAD1B1AJZ9 1412 aa20.76■□□□□ 0.91
SCARB2-221ENST00000640341 MYT1Q01538 1121 aa20.75■□□□□ 0.91
SCARB2-221ENST00000640341 FANCD2Q9BXW9 1451 aa20.74■□□□□ 0.91
SCARB2-221ENST00000640341 FKBP8Q14318 412 aa20.73■□□□□ 0.91
SCARB2-221ENST00000640341 WDR97A6NE52 1622 aa20.71■□□□□ 0.91
SCARB2-221ENST00000640341 CHIC2Q9UKJ5 165 aa20.7■□□□□ 0.9
SCARB2-221ENST00000640341 MTUS2Q5JR59 1369 aa20.69■□□□□ 0.9
SCARB2-221ENST00000640341 NESP48681 1621 aa20.69■□□□□ 0.9
SCARB2-221ENST00000640341 TDRD9Q8NDG6 1382 aaKnown RBP20.68■□□□□ 0.9
SCARB2-221ENST00000640341 PCF11O94913 1555 aaKnown RBP20.67■□□□□ 0.9
SCARB2-221ENST00000640341 ANP32CO43423 234 aa20.67■□□□□ 0.9
SCARB2-221ENST00000640341 TONSLQ96HA7 1378 aa20.67■□□□□ 0.9
SCARB2-221ENST00000640341 PPP1R15AO75807 674 aaPredicted RBP20.66■□□□□ 0.9
SCARB2-221ENST00000640341 DNAJC5BQ9UF47 199 aa20.66■□□□□ 0.9
SCARB2-221ENST00000640341 RRP7BPQ9NSQ0 103 aa20.63■□□□□ 0.89
SCARB2-221ENST00000640341 TSHZ2Q9NRE2 1034 aa20.61■□□□□ 0.89
SCARB2-221ENST00000640341 CC2D2AQ9P2K1 1620 aa20.6■□□□□ 0.89
SCARB2-221ENST00000640341 POLA1P09884 1462 aaPredicted RBP20.6■□□□□ 0.89
SCARB2-221ENST00000640341 NEFLP07196 543 aa20.6■□□□□ 0.89
SCARB2-221ENST00000640341 MAP3K1Q13233 1512 aa20.56■□□□□ 0.88
SCARB2-221ENST00000640341 TOPBP1Q92547 1522 aa20.54■□□□□ 0.88
SCARB2-221ENST00000640341 CNGB1Q14028 1251 aaPredicted RBP20.53■□□□□ 0.88
SCARB2-221ENST00000640341 FGD6Q6ZV73 1430 aa20.53■□□□□ 0.88
SCARB2-221ENST00000640341 CASKIN1Q8WXD9 1431 aa20.52■□□□□ 0.88
SCARB2-221ENST00000640341 FYCO1Q9BQS8 1478 aa20.5■□□□□ 0.87
SCARB2-221ENST00000640341 FMN1Q68DA7 1419 aa20.5■□□□□ 0.87
SCARB2-221ENST00000640341 FOXD1Q16676 465 aa20.49■□□□□ 0.87
SCARB2-221ENST00000640341 CCDC18Q5T9S5 1454 aa20.49■□□□□ 0.87
SCARB2-221ENST00000640341 PTPRKQ15262 1439 aa20.49■□□□□ 0.87
SCARB2-221ENST00000640341 IRX6P78412 446 aaPredicted RBP20.49■□□□□ 0.87
SCARB2-221ENST00000640341 TIMELESSQ9UNS1 1208 aa20.49■□□□□ 0.87
SCARB2-221ENST00000640341 ABCA10Q8WWZ4 1543 aa20.48■□□□□ 0.87
SCARB2-221ENST00000640341 PRDM2Q13029 1718 aa20.47■□□□□ 0.87
SCARB2-221ENST00000640341 HNRNPUQ00839 825 aaKnown RBP eCLIP20.46■□□□□ 0.87
SCARB2-221ENST00000640341 DNMBPQ6XZF7 1577 aa20.45■□□□□ 0.86
SCARB2-221ENST00000640341 CFAP43Q8NDM7 1665 aa20.43■□□□□ 0.86
SCARB2-221ENST00000640341 NCOA2Q15596 1464 aa20.4■□□□□ 0.86
SCARB2-221ENST00000640341 EFCAB5A4FU69 1503 aa20.39■□□□□ 0.85
SCARB2-221ENST00000640341 CCER2I3L3R5 266 aa20.39■□□□□ 0.85
SCARB2-221ENST00000640341 HSPA5P11021 654 aaKnown RBP20.37■□□□□ 0.85
SCARB2-221ENST00000640341 AQRO60306 1485 aaKnown RBP eCLIP20.37■□□□□ 0.85
SCARB2-221ENST00000640341 GAPVD1Q14C86 1478 aa20.37■□□□□ 0.85
SCARB2-221ENST00000640341 UACAQ9BZF9 1416 aa20.37■□□□□ 0.85
SCARB2-221ENST00000640341 URB2Q14146 1524 aaKnown RBP20.36■□□□□ 0.85
SCARB2-221ENST00000640341 POLR3GLQ9BT43 218 aa20.36■□□□□ 0.85
SCARB2-221ENST00000640341 HFM1A2PYH4 1435 aa20.35■□□□□ 0.85
SCARB2-221ENST00000640341 NAIPQ13075 1403 aa20.35■□□□□ 0.85
SCARB2-221ENST00000640341 MYOM3Q5VTT5 1437 aa20.35■□□□□ 0.85
SCARB2-221ENST00000640341 SNAPC4Q5SXM2 1469 aa20.34■□□□□ 0.85
SCARB2-221ENST00000640341 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.32■□□□□ 0.84
SCARB2-221ENST00000640341 FAM9BQ8IZU0 186 aa20.31■□□□□ 0.84
SCARB2-221ENST00000640341 ZNF326Q5BKZ1 582 aaKnown RBP20.3■□□□□ 0.84
SCARB2-221ENST00000640341 SENP3-EIF4A1A0A087X0R7 540 aa20.29■□□□□ 0.84
SCARB2-221ENST00000640341 EIF4G2P78344 907 aaKnown RBP eCLIP20.29■□□□□ 0.84
SCARB2-221ENST00000640341 L3MBTL2Q969R5 705 aa20.29■□□□□ 0.84
SCARB2-221ENST00000640341 MPHOSPH9Q99550 1183 aa20.29■□□□□ 0.84
SCARB2-221ENST00000640341 WASHC2AQ641Q2 1341 aa20.29■□□□□ 0.84
SCARB2-221ENST00000640341 CUL7Q14999 1698 aa20.28■□□□□ 0.84
SCARB2-221ENST00000640341 PTPN23Q9H3S7 1636 aa20.27■□□□□ 0.84
SCARB2-221ENST00000640341 CTTNBP2Q8WZ74 1663 aa20.27■□□□□ 0.83
SCARB2-221ENST00000640341 CCDC184Q52MB2 194 aa20.26■□□□□ 0.83
SCARB2-221ENST00000640341 RBM19Q9Y4C8 960 aaKnown RBP20.25■□□□□ 0.83
SCARB2-221ENST00000640341 ZNF777Q9ULD5 760 aaPredicted RBP20.25■□□□□ 0.83
SCARB2-221ENST00000640341 ZNF644Q9H582 1327 aaPredicted RBP20.25■□□□□ 0.83
SCARB2-221ENST00000640341 PDS5BQ9NTI5 1447 aa20.23■□□□□ 0.83
SCARB2-221ENST00000640341 ANP32EQ9BTT0 268 aa20.23■□□□□ 0.83
SCARB2-221ENST00000640341 GRIN2BQ13224 1484 aa20.22■□□□□ 0.83
SCARB2-221ENST00000640341 SLC4A1APQ9BWU0 796 aaKnown RBP20.22■□□□□ 0.83
SCARB2-221ENST00000640341 C11orf95C9JLR9 678 aaPredicted RBP20.21■□□□□ 0.83
SCARB2-221ENST00000640341 FBLN2P98095 1184 aa20.2■□□□□ 0.82
SCARB2-221ENST00000640341 CDK13Q14004 1512 aaKnown RBP20.2■□□□□ 0.82
SCARB2-221ENST00000640341 MRS2Q9HD23 443 aa20.2■□□□□ 0.82
SCARB2-221ENST00000640341 MAGI3Q5TCQ9 1506 aa20.19■□□□□ 0.82
SCARB2-221ENST00000640341 SUPT6HQ7KZ85 1726 aaKnown RBP20.17■□□□□ 0.82
SCARB2-221ENST00000640341 EHBP1L1Q8N3D4 1523 aa20.16■□□□□ 0.82
SCARB2-221ENST00000640341 LRRIQ1Q96JM4 1722 aa20.14■□□□□ 0.81
SCARB2-221ENST00000640341 NBPF8Q3BBV2 869 aa20.14■□□□□ 0.81
SCARB2-221ENST00000640341 SAMD9Q5K651 1589 aa20.12■□□□□ 0.81
SCARB2-221ENST00000640341 UGGT2Q9NYU1 1516 aa20.11■□□□□ 0.81
SCARB2-221ENST00000640341 LAMC3Q9Y6N6 1575 aa20.11■□□□□ 0.81
SCARB2-221ENST00000640341 EPRSP07814 1512 aaKnown RBP20.1■□□□□ 0.81
SCARB2-221ENST00000640341 KDM6BO15054 1643 aa20.1■□□□□ 0.81
SCARB2-221ENST00000640341 ABCA5Q8WWZ7 1642 aa20.1■□□□□ 0.81
SCARB2-221ENST00000640341 CDK11AQ9UQ88 783 aaPredicted RBP20.09■□□□□ 0.81
SCARB2-221ENST00000640341 PRKRIP1Q9H875 184 aaPredicted RBP20.08■□□□□ 0.81
SCARB2-221ENST00000640341 CFDP1Q9UEE9 299 aaPredicted RBP20.06■□□□□ 0.8
SCARB2-221ENST00000640341 DENND4BO75064 1496 aaPredicted RBP20.06■□□□□ 0.8
SCARB2-221ENST00000640341 B4GALNT3Q6L9W6 998 aa20.05■□□□□ 0.8
SCARB2-221ENST00000640341 KDM5BQ9UGL1 1544 aa20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms