RNA–Protein interactions for RNA: ENST00000640076.1

SCARB2-220, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 1,991 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-220ENST00000640076 SLC4A2P04920 1241 aa13.07□□□□□ -0.32
SCARB2-220ENST00000640076 RUSC2Q8N2Y8 1516 aa13.07□□□□□ -0.32
SCARB2-220ENST00000640076 WDR97A6NE52 1622 aa13.06□□□□□ -0.32
SCARB2-220ENST00000640076 EEA1Q15075 1411 aa13.06□□□□□ -0.32
SCARB2-220ENST00000640076 IFT140Q96RY7 1462 aa13.06□□□□□ -0.32
SCARB2-220ENST00000640076 FAM9AQ8IZU1 332 aaPredicted RBP13.05□□□□□ -0.32
SCARB2-220ENST00000640076 KIF27Q86VH2 1401 aa13.05□□□□□ -0.32
SCARB2-220ENST00000640076 GTF3C3Q9Y5Q9 886 aa13.05□□□□□ -0.32
SCARB2-220ENST00000640076 RNF216Q9NWF9 866 aaPredicted RBP13.03□□□□□ -0.32
SCARB2-220ENST00000640076 MYCNP04198 464 aaPredicted RBP13.03□□□□□ -0.32
SCARB2-220ENST00000640076 ERICH6Q7L0X2 663 aa13.03□□□□□ -0.32
SCARB2-220ENST00000640076 TDRD9Q8NDG6 1382 aaKnown RBP13□□□□□ -0.33
SCARB2-220ENST00000640076 ABCA5Q8WWZ7 1642 aa13□□□□□ -0.33
SCARB2-220ENST00000640076 HOMEZQ8IX15 550 aa12.99□□□□□ -0.33
SCARB2-220ENST00000640076 ZNF608Q9ULD9 1512 aaPredicted RBP12.99□□□□□ -0.33
SCARB2-220ENST00000640076 FBLN2P98095 1184 aa12.98□□□□□ -0.33
SCARB2-220ENST00000640076 GAPVD1Q14C86 1478 aa12.97□□□□□ -0.33
SCARB2-220ENST00000640076 AQRO60306 1485 aaKnown RBP eCLIP12.96□□□□□ -0.34
SCARB2-220ENST00000640076 IGF1RP08069 1367 aa12.95□□□□□ -0.34
SCARB2-220ENST00000640076 EIF4G3O43432 1585 aaKnown RBP12.94□□□□□ -0.34
SCARB2-220ENST00000640076 ERICH3Q5RHP9 1530 aa12.93□□□□□ -0.34
SCARB2-220ENST00000640076 PBRM1Q86U86 1689 aa12.92□□□□□ -0.34
SCARB2-220ENST00000640076 FBXO3Q9UK99 471 aa12.92□□□□□ -0.34
SCARB2-220ENST00000640076 GRIN2BQ13224 1484 aa12.91□□□□□ -0.34
SCARB2-220ENST00000640076 PRXQ9BXM0 1461 aa12.91□□□□□ -0.34
SCARB2-220ENST00000640076 KIF21BO75037 1637 aa12.9□□□□□ -0.34
SCARB2-220ENST00000640076 LOC105371045A0A1W2PR82 267 aa12.89□□□□□ -0.35
SCARB2-220ENST00000640076 CUL7Q14999 1698 aa12.89□□□□□ -0.35
SCARB2-220ENST00000640076 CARMIL1Q5VZK9 1371 aa12.88□□□□□ -0.35
SCARB2-220ENST00000640076 RAPGEF2Q9Y4G8 1499 aa12.86□□□□□ -0.35
SCARB2-220ENST00000640076 GOLGA3Q08378 1498 aa12.86□□□□□ -0.35
SCARB2-220ENST00000640076 SNAPC4Q5SXM2 1469 aa12.85□□□□□ -0.35
SCARB2-220ENST00000640076 ADAMTS12P58397 1594 aa12.85□□□□□ -0.35
SCARB2-220ENST00000640076 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.84□□□□□ -0.35
SCARB2-220ENST00000640076 MAGI1Q96QZ7 1491 aaPredicted RBP12.83□□□□□ -0.35
SCARB2-220ENST00000640076 FHAD1B1AJZ9 1412 aa12.83□□□□□ -0.35
SCARB2-220ENST00000640076 MAPK8IP2Q13387 824 aaPredicted RBP12.82□□□□□ -0.36
SCARB2-220ENST00000640076 PKD2Q13563 968 aa12.81□□□□□ -0.36
SCARB2-220ENST00000640076 BBXQ8WY36 941 aaPredicted RBP12.81□□□□□ -0.36
SCARB2-220ENST00000640076 UBTFP17480 764 aaKnown RBP12.78□□□□□ -0.36
SCARB2-220ENST00000640076 SYNJ2O15056 1496 aa12.78□□□□□ -0.36
SCARB2-220ENST00000640076 PAXIP1Q6ZW49 1069 aaPredicted RBP12.78□□□□□ -0.36
SCARB2-220ENST00000640076 TMEM132AQ24JP5 1023 aa12.77□□□□□ -0.37
SCARB2-220ENST00000640076 TNIKQ9UKE5 1360 aa12.77□□□□□ -0.37
SCARB2-220ENST00000640076 GRIN2AQ12879 1464 aa12.76□□□□□ -0.37
SCARB2-220ENST00000640076 VASPP50552 380 aaPredicted RBP12.74□□□□□ -0.37
SCARB2-220ENST00000640076 CHMP7Q8WUX9 453 aaPredicted RBP12.74□□□□□ -0.37
SCARB2-220ENST00000640076 CFAP44Q96MT7 982 aa12.72□□□□□ -0.37
SCARB2-220ENST00000640076 CHD1O14646 1710 aa12.71□□□□□ -0.38
SCARB2-220ENST00000640076 CTTNBP2Q8WZ74 1663 aa12.7□□□□□ -0.38
SCARB2-220ENST00000640076 IFNLR1Q8IU57 520 aaPredicted RBP12.7□□□□□ -0.38
SCARB2-220ENST00000640076 CEP162Q5TB80 1403 aa12.68□□□□□ -0.38
SCARB2-220ENST00000640076 NUP160Q12769 1436 aa12.68□□□□□ -0.38
SCARB2-220ENST00000640076 CEP170Q5SW79 1584 aa12.68□□□□□ -0.38
SCARB2-220ENST00000640076 NBR1Q14596 966 aa12.65□□□□□ -0.38
SCARB2-220ENST00000640076 KIAA0586Q9BVV6 1533 aa12.65□□□□□ -0.38
SCARB2-220ENST00000640076 NPM1P06748 294 aaKnown RBP eCLIP12.65□□□□□ -0.38
SCARB2-220ENST00000640076 IQGAP2Q13576 1575 aa12.64□□□□□ -0.39
SCARB2-220ENST00000640076 C14orf37Q86TY3 774 aa12.64□□□□□ -0.39
SCARB2-220ENST00000640076 TSHZ2Q9NRE2 1034 aa12.64□□□□□ -0.39
SCARB2-220ENST00000640076 ATF5Q9Y2D1 282 aaPredicted RBP12.64□□□□□ -0.39
SCARB2-220ENST00000640076 CLIP1P30622 1438 aa12.64□□□□□ -0.39
SCARB2-220ENST00000640076 HOXD11P31277 338 aaPredicted RBP12.63□□□□□ -0.39
SCARB2-220ENST00000640076 RANGAP1P46060 587 aaPredicted RBP12.62□□□□□ -0.39
SCARB2-220ENST00000640076 ARHGAP35Q9NRY4 1499 aa12.59□□□□□ -0.39
SCARB2-220ENST00000640076 UGGT2Q9NYU1 1516 aa12.59□□□□□ -0.39
SCARB2-220ENST00000640076 EFCAB5A4FU69 1503 aa12.58□□□□□ -0.4
SCARB2-220ENST00000640076 TTBK1Q5TCY1 1321 aaPredicted RBP12.58□□□□□ -0.4
SCARB2-220ENST00000640076 CLASP1Q7Z460 1538 aa12.57□□□□□ -0.4
SCARB2-220ENST00000640076 SAMD9Q5K651 1589 aa12.57□□□□□ -0.4
SCARB2-220ENST00000640076 SPRYD3Q8NCJ5 442 aa12.56□□□□□ -0.4
SCARB2-220ENST00000640076 ARAP1Q96P48 1450 aa12.55□□□□□ -0.4
SCARB2-220ENST00000640076 JPH4Q96JJ6 628 aa12.55□□□□□ -0.4
SCARB2-220ENST00000640076 OSCARQ8IYS5 282 aa12.54□□□□□ -0.4
SCARB2-220ENST00000640076 SHROOM2Q13796 1616 aa12.54□□□□□ -0.4
SCARB2-220ENST00000640076 DISP1Q96F81 1524 aa12.53□□□□□ -0.4
SCARB2-220ENST00000640076 PROM2Q8N271 834 aa12.53□□□□□ -0.4
SCARB2-220ENST00000640076 DNAJC5Q9H3Z4 198 aa12.53□□□□□ -0.4
SCARB2-220ENST00000640076 P3H3Q8IVL6 736 aa12.52□□□□□ -0.41
SCARB2-220ENST00000640076 FHOD3Q2V2M9 1422 aa12.52□□□□□ -0.41
SCARB2-220ENST00000640076 KIAA0556O60303 1618 aa12.52□□□□□ -0.41
SCARB2-220ENST00000640076 VPS8Q8N3P4 1428 aa12.5□□□□□ -0.41
SCARB2-220ENST00000640076 SPDYE4A6NLX3 237 aa12.5□□□□□ -0.41
SCARB2-220ENST00000640076 PODXL2Q9NZ53 605 aa12.5□□□□□ -0.41
SCARB2-220ENST00000640076 CARMIL2Q6F5E8 1435 aa12.49□□□□□ -0.41
SCARB2-220ENST00000640076 PRG4Q92954 1404 aaPredicted RBP12.49□□□□□ -0.41
SCARB2-220ENST00000640076 MYT1Q01538 1121 aa12.48□□□□□ -0.41
SCARB2-220ENST00000640076 PELP1Q8IZL8 1130 aaKnown RBP12.47□□□□□ -0.41
SCARB2-220ENST00000640076 ERCC6L2Q5T890 1561 aa12.45□□□□□ -0.42
SCARB2-220ENST00000640076 FMN1Q68DA7 1419 aa12.45□□□□□ -0.42
SCARB2-220ENST00000640076 APLP2Q06481 763 aa12.44□□□□□ -0.42
SCARB2-220ENST00000640076 ECM2O94769 699 aaPredicted RBP12.43□□□□□ -0.42
SCARB2-220ENST00000640076 PCF11O94913 1555 aaKnown RBP12.42□□□□□ -0.42
SCARB2-220ENST00000640076 CASKIN1Q8WXD9 1431 aa12.41□□□□□ -0.42
SCARB2-220ENST00000640076 FYCO1Q9BQS8 1478 aa12.4□□□□□ -0.42
SCARB2-220ENST00000640076 PTPRGP23470 1445 aa12.39□□□□□ -0.43
SCARB2-220ENST00000640076 PLB1Q6P1J6 1458 aa12.37□□□□□ -0.43
SCARB2-220ENST00000640076 RAPGEF6Q8TEU7 1601 aa12.36□□□□□ -0.43
SCARB2-220ENST00000640076 ABCA8O94911 1581 aa12.35□□□□□ -0.43
SCARB2-220ENST00000640076 HECW1Q76N89 1606 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms