RNA–Protein interactions for RNA: ENST00000639566.1

PRICKLE1-211, Transcript of prickle planar cell polarity protein 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PRICKLE1, Length 3,341 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE1-211ENST00000639566 BIVM-ERCC5R4GMW8 1640 aa22.93■■□□□ 1.26
PRICKLE1-211ENST00000639566 RAB3GAP2Q9H2M9 1393 aa22.91■■□□□ 1.26
PRICKLE1-211ENST00000639566 THOC2Q8NI27 1593 aaKnown RBP22.91■■□□□ 1.26
PRICKLE1-211ENST00000639566 PDS5BQ9NTI5 1447 aa22.9■■□□□ 1.26
PRICKLE1-211ENST00000639566 FANCD2Q9BXW9 1451 aa22.88■■□□□ 1.25
PRICKLE1-211ENST00000639566 DDX10Q13206 875 aaKnown RBP22.88■■□□□ 1.25
PRICKLE1-211ENST00000639566 WDR97A6NE52 1622 aa22.88■■□□□ 1.25
PRICKLE1-211ENST00000639566 NEFLP07196 543 aa22.87■■□□□ 1.25
PRICKLE1-211ENST00000639566 PPP1R15AO75807 674 aaPredicted RBP22.85■■□□□ 1.25
PRICKLE1-211ENST00000639566 ITGAEP38570 1179 aa22.83■■□□□ 1.25
PRICKLE1-211ENST00000639566 ARHGAP35Q9NRY4 1499 aa22.8■■□□□ 1.24
PRICKLE1-211ENST00000639566 WDR62O43379 1518 aa22.79■■□□□ 1.24
PRICKLE1-211ENST00000639566 CCER2I3L3R5 266 aa22.79■■□□□ 1.24
PRICKLE1-211ENST00000639566 MSH5O43196 834 aa22.78■■□□□ 1.24
PRICKLE1-211ENST00000639566 SETD5Q9C0A6 1442 aa22.77■■□□□ 1.24
PRICKLE1-211ENST00000639566 TRIM52Q96A61 297 aa22.75■■□□□ 1.23
PRICKLE1-211ENST00000639566 MRC2Q9UBG0 1479 aa22.74■■□□□ 1.23
PRICKLE1-211ENST00000639566 URB2Q14146 1524 aaKnown RBP22.72■■□□□ 1.23
PRICKLE1-211ENST00000639566 SIN3AQ96ST3 1273 aa22.72■■□□□ 1.23
PRICKLE1-211ENST00000639566 DNMBPQ6XZF7 1577 aa22.71■■□□□ 1.23
PRICKLE1-211ENST00000639566 TIAM1Q13009 1591 aa22.69■■□□□ 1.22
PRICKLE1-211ENST00000639566 MAP3K1Q13233 1512 aa22.69■■□□□ 1.22
PRICKLE1-211ENST00000639566 ERCC6Q03468 1493 aa22.68■■□□□ 1.22
PRICKLE1-211ENST00000639566 CUX1P39880 1505 aa22.68■■□□□ 1.22
PRICKLE1-211ENST00000639566 KIF27Q86VH2 1401 aa22.67■■□□□ 1.22
PRICKLE1-211ENST00000639566 ANP32CO43423 234 aa22.67■■□□□ 1.22
PRICKLE1-211ENST00000639566 TIMELESSQ9UNS1 1208 aa22.67■■□□□ 1.22
PRICKLE1-211ENST00000639566 FANCIQ9NVI1 1328 aa22.66■■□□□ 1.22
PRICKLE1-211ENST00000639566 TOPBP1Q92547 1522 aa22.63■■□□□ 1.21
PRICKLE1-211ENST00000639566 HIRIP3Q9BW71 556 aaPredicted RBP22.62■■□□□ 1.21
PRICKLE1-211ENST00000639566 PHLDB1Q86UU1 1377 aa22.59■■□□□ 1.21
PRICKLE1-211ENST00000639566 LRRC9Q6ZRR7 1453 aa22.59■■□□□ 1.21
PRICKLE1-211ENST00000639566 CDK11AQ9UQ88 783 aaPredicted RBP22.51■■□□□ 1.19
PRICKLE1-211ENST00000639566 TARBP1Q13395 1621 aaKnown RBP22.5■■□□□ 1.19
PRICKLE1-211ENST00000639566 FAM50AQ14320 339 aaKnown RBP22.49■■□□□ 1.19
PRICKLE1-211ENST00000639566 CFAP43Q8NDM7 1665 aa22.49■■□□□ 1.19
PRICKLE1-211ENST00000639566 ERICH6Q7L0X2 663 aa22.47■■□□□ 1.19
PRICKLE1-211ENST00000639566 POLA1P09884 1462 aaPredicted RBP22.46■■□□□ 1.19
PRICKLE1-211ENST00000639566 FGD5Q6ZNL6 1462 aa22.44■■□□□ 1.18
PRICKLE1-211ENST00000639566 IRX6P78412 446 aaPredicted RBP22.44■■□□□ 1.18
PRICKLE1-211ENST00000639566 HNRNPUQ00839 825 aaKnown RBP eCLIP22.42■■□□□ 1.18
PRICKLE1-211ENST00000639566 PCF11O94913 1555 aaKnown RBP22.39■■□□□ 1.17
PRICKLE1-211ENST00000639566 TONSLQ96HA7 1378 aa22.39■■□□□ 1.17
PRICKLE1-211ENST00000639566 ERICH6BQ5W0A0 696 aa22.39■■□□□ 1.17
PRICKLE1-211ENST00000639566 MYT1LQ9UL68 1186 aa22.39■■□□□ 1.17
PRICKLE1-211ENST00000639566 IGF1RP08069 1367 aa22.38■■□□□ 1.17
PRICKLE1-211ENST00000639566 FHAD1B1AJZ9 1412 aa22.37■■□□□ 1.17
PRICKLE1-211ENST00000639566 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.37■■□□□ 1.17
PRICKLE1-211ENST00000639566 IFT140Q96RY7 1462 aa22.36■■□□□ 1.17
PRICKLE1-211ENST00000639566 ABCA10Q8WWZ4 1543 aa22.34■■□□□ 1.17
PRICKLE1-211ENST00000639566 PPP4R2Q9NY27 417 aa22.33■■□□□ 1.17
PRICKLE1-211ENST00000639566 ABCA5Q8WWZ7 1642 aa22.32■■□□□ 1.16
PRICKLE1-211ENST00000639566 KDM5BQ9UGL1 1544 aa22.3■■□□□ 1.16
PRICKLE1-211ENST00000639566 CCDC18Q5T9S5 1454 aa22.29■■□□□ 1.16
PRICKLE1-211ENST00000639566 CARMIL1Q5VZK9 1371 aa22.29■■□□□ 1.16
PRICKLE1-211ENST00000639566 DEKP35659 375 aaKnown RBP22.28■■□□□ 1.16
PRICKLE1-211ENST00000639566 RAD54L2Q9Y4B4 1467 aa22.27■■□□□ 1.16
PRICKLE1-211ENST00000639566 UACAQ9BZF9 1416 aa22.27■■□□□ 1.16
PRICKLE1-211ENST00000639566 EIF4G3O43432 1585 aaKnown RBP22.24■■□□□ 1.15
PRICKLE1-211ENST00000639566 FYCO1Q9BQS8 1478 aa22.23■■□□□ 1.15
PRICKLE1-211ENST00000639566 PTPN23Q9H3S7 1636 aa22.23■■□□□ 1.15
PRICKLE1-211ENST00000639566 HFM1A2PYH4 1435 aa22.22■■□□□ 1.15
PRICKLE1-211ENST00000639566 WASHC2AQ641Q2 1341 aa22.22■■□□□ 1.15
PRICKLE1-211ENST00000639566 FGD6Q6ZV73 1430 aa22.22■■□□□ 1.15
PRICKLE1-211ENST00000639566 PBRM1Q86U86 1689 aa22.21■■□□□ 1.15
PRICKLE1-211ENST00000639566 NCOA2Q15596 1464 aa22.19■■□□□ 1.14
PRICKLE1-211ENST00000639566 ZNF608Q9ULD9 1512 aaPredicted RBP22.19■■□□□ 1.14
PRICKLE1-211ENST00000639566 PTPRKQ15262 1439 aa22.18■■□□□ 1.14
PRICKLE1-211ENST00000639566 P3H3Q8IVL6 736 aa22.18■■□□□ 1.14
PRICKLE1-211ENST00000639566 CASKIN1Q8WXD9 1431 aa22.17■■□□□ 1.14
PRICKLE1-211ENST00000639566 B4GALNT3Q6L9W6 998 aa22.17■■□□□ 1.14
PRICKLE1-211ENST00000639566 ATP1B4Q9UN42 357 aaPredicted RBP22.17■■□□□ 1.14
PRICKLE1-211ENST00000639566 FHOD3Q2V2M9 1422 aa22.17■■□□□ 1.14
PRICKLE1-211ENST00000639566 AQRO60306 1485 aaKnown RBP eCLIP22.16■■□□□ 1.14
PRICKLE1-211ENST00000639566 CCDC184Q52MB2 194 aa22.16■■□□□ 1.14
PRICKLE1-211ENST00000639566 HSPA5P11021 654 aaKnown RBP22.14■■□□□ 1.14
PRICKLE1-211ENST00000639566 NOP58Q9Y2X3 529 aaKnown RBP22.14■■□□□ 1.14
PRICKLE1-211ENST00000639566 CNTLNQ9NXG0 1405 aa22.14■■□□□ 1.13
PRICKLE1-211ENST00000639566 NAIPQ13075 1403 aa22.13■■□□□ 1.13
PRICKLE1-211ENST00000639566 EFCAB5A4FU69 1503 aa22.12■■□□□ 1.13
PRICKLE1-211ENST00000639566 ZBED9Q6R2W3 1325 aa22.11■■□□□ 1.13
PRICKLE1-211ENST00000639566 PAK3O75914 559 aaPredicted RBP22.08■■□□□ 1.13
PRICKLE1-211ENST00000639566 GAPVD1Q14C86 1478 aa22.06■■□□□ 1.12
PRICKLE1-211ENST00000639566 PRKCSHP14314 528 aaPredicted RBP22.05■■□□□ 1.12
PRICKLE1-211ENST00000639566 PRKRIP1Q9H875 184 aaPredicted RBP22.05■■□□□ 1.12
PRICKLE1-211ENST00000639566 NBR1Q14596 966 aa22.05■■□□□ 1.12
PRICKLE1-211ENST00000639566 FAM9BQ8IZU0 186 aa22.04■■□□□ 1.12
PRICKLE1-211ENST00000639566 FMN1Q68DA7 1419 aa22.04■■□□□ 1.12
PRICKLE1-211ENST00000639566 EIF4G2P78344 907 aaKnown RBP eCLIP22.03■■□□□ 1.12
PRICKLE1-211ENST00000639566 SNAPC4Q5SXM2 1469 aa22.02■■□□□ 1.12
PRICKLE1-211ENST00000639566 CUL7Q14999 1698 aa22.02■■□□□ 1.12
PRICKLE1-211ENST00000639566 GRIN2BQ13224 1484 aa22.02■■□□□ 1.11
PRICKLE1-211ENST00000639566 NCOA1Q15788 1441 aa22.01■■□□□ 1.11
PRICKLE1-211ENST00000639566 ADAMTS12P58397 1594 aa22.01■■□□□ 1.11
PRICKLE1-211ENST00000639566 MRS2Q9HD23 443 aa22.01■■□□□ 1.11
PRICKLE1-211ENST00000639566 DENND4BO75064 1496 aaPredicted RBP22.01■■□□□ 1.11
PRICKLE1-211ENST00000639566 CCDC7Q96M83 1385 aa21.99■■□□□ 1.11
PRICKLE1-211ENST00000639566 HECW1Q76N89 1606 aa21.99■■□□□ 1.11
PRICKLE1-211ENST00000639566 MTUS2Q5JR59 1369 aa21.99■■□□□ 1.11
PRICKLE1-211ENST00000639566 TDRD9Q8NDG6 1382 aaKnown RBP21.99■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 137.1 ms