RNA–Protein interactions for RNA: ENST00000639120.1

KCNMA1-252, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

TSL 5 BASIC

Gene KCNMA1, Length 2,308 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-252ENST00000639120 CLIP1P30622 1438 aa29.82■■■□□ 2.36
KCNMA1-252ENST00000639120 THOC2Q8NI27 1593 aaKnown RBP29.81■■■□□ 2.36
KCNMA1-252ENST00000639120 WDR97A6NE52 1622 aa29.75■■■□□ 2.35
KCNMA1-252ENST00000639120 TARBP1Q13395 1621 aaKnown RBP29.73■■■□□ 2.35
KCNMA1-252ENST00000639120 IGF1RP08069 1367 aa29.73■■■□□ 2.35
KCNMA1-252ENST00000639120 IFT140Q96RY7 1462 aa29.72■■■□□ 2.35
KCNMA1-252ENST00000639120 PRXQ9BXM0 1461 aa29.72■■■□□ 2.35
KCNMA1-252ENST00000639120 BCANQ96GW7 911 aa29.71■■■□□ 2.35
KCNMA1-252ENST00000639120 TDRD9Q8NDG6 1382 aaKnown RBP29.69■■■□□ 2.34
KCNMA1-252ENST00000639120 KCNH8Q96L42 1107 aa29.69■■■□□ 2.34
KCNMA1-252ENST00000639120 ERICH3Q5RHP9 1530 aa29.68■■■□□ 2.34
KCNMA1-252ENST00000639120 RAPGEF2Q9Y4G8 1499 aa29.67■■■□□ 2.34
KCNMA1-252ENST00000639120 ABCA5Q8WWZ7 1642 aa29.64■■■□□ 2.34
KCNMA1-252ENST00000639120 GAPVD1Q14C86 1478 aa29.64■■■□□ 2.34
KCNMA1-252ENST00000639120 APLP2Q06481 763 aa29.63■■■□□ 2.33
KCNMA1-252ENST00000639120 CARMIL1Q5VZK9 1371 aa29.61■■■□□ 2.33
KCNMA1-252ENST00000639120 RBM19Q9Y4C8 960 aaKnown RBP29.61■■■□□ 2.33
KCNMA1-252ENST00000639120 FKBP8Q14318 412 aa29.6■■■□□ 2.33
KCNMA1-252ENST00000639120 CUL7Q14999 1698 aa29.54■■■□□ 2.32
KCNMA1-252ENST00000639120 AQRO60306 1485 aaKnown RBP eCLIP29.51■■■□□ 2.32
KCNMA1-252ENST00000639120 ZNF608Q9ULD9 1512 aaPredicted RBP29.48■■■□□ 2.31
KCNMA1-252ENST00000639120 GRIN2BQ13224 1484 aa29.46■■■□□ 2.31
KCNMA1-252ENST00000639120 PBRM1Q86U86 1689 aa29.43■■■□□ 2.3
KCNMA1-252ENST00000639120 MSH5O43196 834 aa29.4■■■□□ 2.3
KCNMA1-252ENST00000639120 EIF4G3O43432 1585 aaKnown RBP29.39■■■□□ 2.3
KCNMA1-252ENST00000639120 FHAD1B1AJZ9 1412 aa29.34■■■□□ 2.29
KCNMA1-252ENST00000639120 RANGAP1P46060 587 aaPredicted RBP29.33■■■□□ 2.29
KCNMA1-252ENST00000639120 RRBP1Q9P2E9 1410 aaKnown RBP29.33■■■□□ 2.29
KCNMA1-252ENST00000639120 ITGAEP38570 1179 aa29.29■■■□□ 2.28
KCNMA1-252ENST00000639120 NEFLP07196 543 aa29.29■■■□□ 2.28
KCNMA1-252ENST00000639120 ADAMTS12P58397 1594 aa29.29■■■□□ 2.28
KCNMA1-252ENST00000639120 KANK4Q5T7N3 995 aaPredicted RBP29.28■■■□□ 2.28
KCNMA1-252ENST00000639120 SNAPC4Q5SXM2 1469 aa29.25■■■□□ 2.27
KCNMA1-252ENST00000639120 ARAP1Q96P48 1450 aa29.25■■■□□ 2.27
KCNMA1-252ENST00000639120 MAPKBP1O60336 1514 aa29.23■■■□□ 2.27
KCNMA1-252ENST00000639120 MAGI1Q96QZ7 1491 aaPredicted RBP29.22■■■□□ 2.27
KCNMA1-252ENST00000639120 DDX10Q13206 875 aaKnown RBP29.2■■■□□ 2.27
KCNMA1-252ENST00000639120 CTTNBP2Q8WZ74 1663 aa29.14■■■□□ 2.26
KCNMA1-252ENST00000639120 FANCIQ9NVI1 1328 aa29.14■■■□□ 2.26
KCNMA1-252ENST00000639120 PPP1R15AO75807 674 aaPredicted RBP29.12■■■□□ 2.25
KCNMA1-252ENST00000639120 TRIM52Q96A61 297 aa29.11■■■□□ 2.25
KCNMA1-252ENST00000639120 CHMP7Q8WUX9 453 aaPredicted RBP29.11■■■□□ 2.25
KCNMA1-252ENST00000639120 SYNJ2O15056 1496 aa29.11■■■□□ 2.25
KCNMA1-252ENST00000639120 CCNB3Q8WWL7 1395 aa29.1■■■□□ 2.25
KCNMA1-252ENST00000639120 GRIN2AQ12879 1464 aa29.07■■■□□ 2.24
KCNMA1-252ENST00000639120 RAB3GAP2Q9H2M9 1393 aa29.06■■■□□ 2.24
KCNMA1-252ENST00000639120 CCER2I3L3R5 266 aa29.06■■■□□ 2.24
KCNMA1-252ENST00000639120 FBLN2P98095 1184 aa29.05■■■□□ 2.24
KCNMA1-252ENST00000639120 ARHGAP35Q9NRY4 1499 aa29.04■■■□□ 2.24
KCNMA1-252ENST00000639120 PRKCSHP14314 528 aaPredicted RBP28.99■■■□□ 2.23
KCNMA1-252ENST00000639120 EFCAB5A4FU69 1503 aa28.99■■■□□ 2.23
KCNMA1-252ENST00000639120 IQGAP2Q13576 1575 aa28.95■■■□□ 2.22
KCNMA1-252ENST00000639120 ERICH6Q7L0X2 663 aa28.94■■■□□ 2.22
KCNMA1-252ENST00000639120 KIAA0586Q9BVV6 1533 aa28.92■■■□□ 2.22
KCNMA1-252ENST00000639120 ANP32CO43423 234 aa28.91■■■□□ 2.22
KCNMA1-252ENST00000639120 SIN3AQ96ST3 1273 aa28.9■■■□□ 2.22
KCNMA1-252ENST00000639120 P3H3Q8IVL6 736 aa28.89■■■□□ 2.22
KCNMA1-252ENST00000639120 CDK11AQ9UQ88 783 aaPredicted RBP28.89■■■□□ 2.22
KCNMA1-252ENST00000639120 HIRIP3Q9BW71 556 aaPredicted RBP28.86■■■□□ 2.21
KCNMA1-252ENST00000639120 CEP170Q5SW79 1584 aa28.85■■■□□ 2.21
KCNMA1-252ENST00000639120 NUP160Q12769 1436 aa28.85■■■□□ 2.21
KCNMA1-252ENST00000639120 SETD5Q9C0A6 1442 aa28.85■■■□□ 2.21
KCNMA1-252ENST00000639120 MYT1LQ9UL68 1186 aa28.83■■■□□ 2.21
KCNMA1-252ENST00000639120 SAMD9Q5K651 1589 aa28.83■■■□□ 2.21
KCNMA1-252ENST00000639120 FHOD3Q2V2M9 1422 aa28.83■■■□□ 2.21
KCNMA1-252ENST00000639120 DEKP35659 375 aaKnown RBP28.8■■■□□ 2.2
KCNMA1-252ENST00000639120 UGGT2Q9NYU1 1516 aa28.79■■■□□ 2.2
KCNMA1-252ENST00000639120 IRX6P78412 446 aaPredicted RBP28.78■■■□□ 2.2
KCNMA1-252ENST00000639120 CHD1O14646 1710 aa28.77■■■□□ 2.2
KCNMA1-252ENST00000639120 FMN1Q68DA7 1419 aa28.75■■■□□ 2.19
KCNMA1-252ENST00000639120 TIMELESSQ9UNS1 1208 aa28.74■■■□□ 2.19
KCNMA1-252ENST00000639120 TIAM1Q13009 1591 aa28.67■■■□□ 2.18
KCNMA1-252ENST00000639120 JPH4Q96JJ6 628 aa28.67■■■□□ 2.18
KCNMA1-252ENST00000639120 HNRNPUQ00839 825 aaKnown RBP eCLIP28.65■■■□□ 2.18
KCNMA1-252ENST00000639120 DNAJC5Q9H3Z4 198 aa28.64■■■□□ 2.17
KCNMA1-252ENST00000639120 ATP1B4Q9UN42 357 aaPredicted RBP28.64■■■□□ 2.17
KCNMA1-252ENST00000639120 CARMIL2Q6F5E8 1435 aa28.64■■■□□ 2.17
KCNMA1-252ENST00000639120 KIAA0556O60303 1618 aa28.63■■■□□ 2.17
KCNMA1-252ENST00000639120 FYCO1Q9BQS8 1478 aa28.63■■■□□ 2.17
KCNMA1-252ENST00000639120 CASKIN1Q8WXD9 1431 aa28.63■■■□□ 2.17
KCNMA1-252ENST00000639120 PCF11O94913 1555 aaKnown RBP28.63■■■□□ 2.17
KCNMA1-252ENST00000639120 DISP1Q96F81 1524 aa28.63■■■□□ 2.17
KCNMA1-252ENST00000639120 MAP3K1Q13233 1512 aa28.61■■■□□ 2.17
KCNMA1-252ENST00000639120 ERICH6BQ5W0A0 696 aa28.6■■■□□ 2.17
KCNMA1-252ENST00000639120 PPP4R2Q9NY27 417 aa28.59■■■□□ 2.17
KCNMA1-252ENST00000639120 PHLDB1Q86UU1 1377 aa28.58■■■□□ 2.17
KCNMA1-252ENST00000639120 LRRC9Q6ZRR7 1453 aa28.54■■■□□ 2.16
KCNMA1-252ENST00000639120 PRG4Q92954 1404 aaPredicted RBP28.5■■■□□ 2.15
KCNMA1-252ENST00000639120 NOP58Q9Y2X3 529 aaKnown RBP28.48■■■□□ 2.15
KCNMA1-252ENST00000639120 FAM50AQ14320 339 aaKnown RBP28.48■■■□□ 2.15
KCNMA1-252ENST00000639120 CLASP1Q7Z460 1538 aa28.45■■■□□ 2.14
KCNMA1-252ENST00000639120 PAK3O75914 559 aaPredicted RBP28.44■■■□□ 2.14
KCNMA1-252ENST00000639120 ANO8Q9HCE9 1232 aaPredicted RBP28.44■■■□□ 2.14
KCNMA1-252ENST00000639120 CFAP43Q8NDM7 1665 aa28.44■■■□□ 2.14
KCNMA1-252ENST00000639120 SHROOM2Q13796 1616 aa28.44■■■□□ 2.14
KCNMA1-252ENST00000639120 HECW1Q76N89 1606 aa28.44■■■□□ 2.14
KCNMA1-252ENST00000639120 NBR1Q14596 966 aa28.43■■■□□ 2.14
KCNMA1-252ENST00000639120 B4GALNT3Q6L9W6 998 aa28.42■■■□□ 2.14
KCNMA1-252ENST00000639120 TONSLQ96HA7 1378 aa28.41■■■□□ 2.14
KCNMA1-252ENST00000639120 CCDC18Q5T9S5 1454 aa28.39■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms