RNA–Protein interactions for RNA: ENST00000638157.1

GRAMD1B-216, Transcript of GRAM domain containing 1B, humanhuman

TSL 5 BASIC

Gene GRAMD1B, Length 3,849 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1B-216ENST00000638157 ARID3CA6NKF2 412 aa18.49■□□□□ 0.55
GRAMD1B-216ENST00000638157 KIF27Q86VH2 1401 aa18.48■□□□□ 0.55
GRAMD1B-216ENST00000638157 KCNH8Q96L42 1107 aa18.46■□□□□ 0.55
GRAMD1B-216ENST00000638157 CLSPNQ9HAW4 1339 aa18.42■□□□□ 0.54
GRAMD1B-216ENST00000638157 RUSC2Q8N2Y8 1516 aa18.4■□□□□ 0.54
GRAMD1B-216ENST00000638157 DDX10Q13206 875 aaKnown RBP18.4■□□□□ 0.54
GRAMD1B-216ENST00000638157 HIRIP3Q9BW71 556 aaPredicted RBP18.39■□□□□ 0.53
GRAMD1B-216ENST00000638157 EEA1Q15075 1411 aa18.35■□□□□ 0.53
GRAMD1B-216ENST00000638157 RAD54L2Q9Y4B4 1467 aa18.34■□□□□ 0.53
GRAMD1B-216ENST00000638157 CARMIL1Q5VZK9 1371 aa18.32■□□□□ 0.52
GRAMD1B-216ENST00000638157 FGD5Q6ZNL6 1462 aa18.31■□□□□ 0.52
GRAMD1B-216ENST00000638157 SALL2Q9Y467 1007 aaPredicted RBP18.31■□□□□ 0.52
GRAMD1B-216ENST00000638157 NPM2Q86SE8 214 aaKnown RBP18.3■□□□□ 0.52
GRAMD1B-216ENST00000638157 SYNJ1O43426 1573 aa18.26■□□□□ 0.51
GRAMD1B-216ENST00000638157 GOLGA3Q08378 1498 aa18.25■□□□□ 0.51
GRAMD1B-216ENST00000638157 CUX1P39880 1505 aa18.22■□□□□ 0.51
GRAMD1B-216ENST00000638157 CLIP1P30622 1438 aa18.21■□□□□ 0.51
GRAMD1B-216ENST00000638157 MSH5O43196 834 aa18.21■□□□□ 0.51
GRAMD1B-216ENST00000638157 HNRNPUQ00839 825 aaKnown RBP eCLIP18.19■□□□□ 0.56e-7■■□□□ 14.2
GRAMD1B-216ENST00000638157 AQRO60306 1485 aaKnown RBP eCLIP18.19■□□□□ 0.5
GRAMD1B-216ENST00000638157 LAMC3Q9Y6N6 1575 aa18.19■□□□□ 0.5
GRAMD1B-216ENST00000638157 TOPBP1Q92547 1522 aa18.18■□□□□ 0.5
GRAMD1B-216ENST00000638157 CEP162Q5TB80 1403 aa18.18■□□□□ 0.5
GRAMD1B-216ENST00000638157 ANP32CO43423 234 aa18.18■□□□□ 0.5
GRAMD1B-216ENST00000638157 SENP3-EIF4A1A0A087X0R7 540 aa18.17■□□□□ 0.5
GRAMD1B-216ENST00000638157 TNIKQ9UKE5 1360 aa18.15■□□□□ 0.5
GRAMD1B-216ENST00000638157 MRC2Q9UBG0 1479 aa18.14■□□□□ 0.5
GRAMD1B-216ENST00000638157 IGF1RP08069 1367 aa18.14■□□□□ 0.49
GRAMD1B-216ENST00000638157 POLA1P09884 1462 aaPredicted RBP18.13■□□□□ 0.49
GRAMD1B-216ENST00000638157 RAPGEF2Q9Y4G8 1499 aa18.12■□□□□ 0.49
GRAMD1B-216ENST00000638157 FAM50AQ14320 339 aaKnown RBP18.11■□□□□ 0.49
GRAMD1B-216ENST00000638157 ANP32AP39687 249 aaKnown RBP18.1■□□□□ 0.49
GRAMD1B-216ENST00000638157 GAPVD1Q14C86 1478 aa18.09■□□□□ 0.49
GRAMD1B-216ENST00000638157 IL27Q8NEV9 243 aa18.09■□□□□ 0.49
GRAMD1B-216ENST00000638157 B4GALNT3Q6L9W6 998 aa18.08■□□□□ 0.48
GRAMD1B-216ENST00000638157 MYT1LQ9UL68 1186 aa18.08■□□□□ 0.48
GRAMD1B-216ENST00000638157 URB2Q14146 1524 aaKnown RBP18.08■□□□□ 0.48
GRAMD1B-216ENST00000638157 TOP2BQ02880 1626 aa18.06■□□□□ 0.48
GRAMD1B-216ENST00000638157 POLR3GLQ9BT43 218 aa18.06■□□□□ 0.48
GRAMD1B-216ENST00000638157 LAS1LQ9Y4W2 734 aaKnown RBP18.06■□□□□ 0.48
GRAMD1B-216ENST00000638157 ZBTB47Q9UFB7 747 aaPredicted RBP18.05■□□□□ 0.48
GRAMD1B-216ENST00000638157 NOP58Q9Y2X3 529 aaKnown RBP18.04■□□□□ 0.48
GRAMD1B-216ENST00000638157 DNMBPQ6XZF7 1577 aa18.02■□□□□ 0.48
GRAMD1B-216ENST00000638157 DAXXQ9UER7 740 aaPredicted RBP18■□□□□ 0.47
GRAMD1B-216ENST00000638157 ARXQ96QS3 562 aa17.97■□□□□ 0.47
GRAMD1B-216ENST00000638157 ZNF777Q9ULD5 760 aaPredicted RBP17.97■□□□□ 0.47
GRAMD1B-216ENST00000638157 FAM9BQ8IZU0 186 aa17.96■□□□□ 0.47
GRAMD1B-216ENST00000638157 JPH4Q96JJ6 628 aa17.95■□□□□ 0.46
GRAMD1B-216ENST00000638157 NPM1P06748 294 aaKnown RBP eCLIP17.93■□□□□ 0.46
GRAMD1B-216ENST00000638157 ZNF608Q9ULD9 1512 aaPredicted RBP17.92■□□□□ 0.46
GRAMD1B-216ENST00000638157 IFT140Q96RY7 1462 aa17.92■□□□□ 0.46
GRAMD1B-216ENST00000638157 TIMELESSQ9UNS1 1208 aa17.92■□□□□ 0.46
GRAMD1B-216ENST00000638157 NEFMP07197 916 aa17.89■□□□□ 0.45
GRAMD1B-216ENST00000638157 PAK3O75914 559 aaPredicted RBP17.89■□□□□ 0.45
GRAMD1B-216ENST00000638157 GRIN2BQ13224 1484 aa17.88■□□□□ 0.45
GRAMD1B-216ENST00000638157 KIF21AQ7Z4S6 1674 aa17.88■□□□□ 0.45
GRAMD1B-216ENST00000638157 MTUS2Q5JR59 1369 aa17.88■□□□□ 0.45
GRAMD1B-216ENST00000638157 FHOD3Q2V2M9 1422 aa17.86■□□□□ 0.45
GRAMD1B-216ENST00000638157 ABCA10Q8WWZ4 1543 aa17.86■□□□□ 0.45
GRAMD1B-216ENST00000638157 OSCARQ8IYS5 282 aa17.84■□□□□ 0.45
GRAMD1B-216ENST00000638157 FANCIQ9NVI1 1328 aa17.82■□□□□ 0.44
GRAMD1B-216ENST00000638157 FHAD1B1AJZ9 1412 aa17.82■□□□□ 0.44
GRAMD1B-216ENST00000638157 SNAPC4Q5SXM2 1469 aa17.82■□□□□ 0.44
GRAMD1B-216ENST00000638157 PLEKHD1A6NEE1 506 aa17.81■□□□□ 0.44
GRAMD1B-216ENST00000638157 KANK4Q5T7N3 995 aaPredicted RBP17.8■□□□□ 0.44
GRAMD1B-216ENST00000638157 SIN3AQ96ST3 1273 aa17.8■□□□□ 0.44
GRAMD1B-216ENST00000638157 PRXQ9BXM0 1461 aa17.8■□□□□ 0.44
GRAMD1B-216ENST00000638157 BIVM-ERCC5R4GMW8 1640 aa17.79■□□□□ 0.44
GRAMD1B-216ENST00000638157 CARMIL2Q6F5E8 1435 aa17.76■□□□□ 0.43
GRAMD1B-216ENST00000638157 CHIC2Q9UKJ5 165 aa17.76■□□□□ 0.43
GRAMD1B-216ENST00000638157 VPS8Q8N3P4 1428 aa17.76■□□□□ 0.43
GRAMD1B-216ENST00000638157 PPP4R2Q9NY27 417 aa17.76■□□□□ 0.43
GRAMD1B-216ENST00000638157 ARID4BQ4LE39 1312 aaPredicted RBP17.73■□□□□ 0.43
GRAMD1B-216ENST00000638157 CYB5RLQ6IPT4 315 aa17.72■□□□□ 0.43
GRAMD1B-216ENST00000638157 ERICH6BQ5W0A0 696 aa17.71■□□□□ 0.43
GRAMD1B-216ENST00000638157 BRPF3Q9ULD4 1205 aa17.7■□□□□ 0.42
GRAMD1B-216ENST00000638157 GLIPR1L2Q4G1C9 344 aa17.69■□□□□ 0.42
GRAMD1B-216ENST00000638157 VSIG10Q8N0Z9 540 aa17.66■□□□□ 0.42
GRAMD1B-216ENST00000638157 KIF21BO75037 1637 aa17.66■□□□□ 0.42
GRAMD1B-216ENST00000638157 FMN1Q68DA7 1419 aa17.65■□□□□ 0.42
GRAMD1B-216ENST00000638157 PKNOX2Q96KN3 472 aa17.65■□□□□ 0.42
GRAMD1B-216ENST00000638157 MRS2Q9HD23 443 aa17.65■□□□□ 0.42
GRAMD1B-216ENST00000638157 PTPRGP23470 1445 aa17.64■□□□□ 0.41
GRAMD1B-216ENST00000638157 ERICH3Q5RHP9 1530 aa17.63■□□□□ 0.41
GRAMD1B-216ENST00000638157 CFDP1Q9UEE9 299 aaPredicted RBP17.63■□□□□ 0.41
GRAMD1B-216ENST00000638157 WDR62O43379 1518 aa17.62■□□□□ 0.41
GRAMD1B-216ENST00000638157 IPO9Q96P70 1041 aaKnown RBP17.61■□□□□ 0.41
GRAMD1B-216ENST00000638157 PRDM2Q13029 1718 aa17.6■□□□□ 0.41
GRAMD1B-216ENST00000638157 ARAP1Q96P48 1450 aa17.6■□□□□ 0.41
GRAMD1B-216ENST00000638157 ARHGAP35Q9NRY4 1499 aa17.59■□□□□ 0.41
GRAMD1B-216ENST00000638157 PRG4Q92954 1404 aaPredicted RBP17.58■□□□□ 0.41
GRAMD1B-216ENST00000638157 UBE2Q2Q8WVN8 375 aa17.58■□□□□ 0.41
GRAMD1B-216ENST00000638157 RRP7BPQ9NSQ0 103 aa17.58■□□□□ 0.4
GRAMD1B-216ENST00000638157 SYNJ2O15056 1496 aa17.58■□□□□ 0.4
GRAMD1B-216ENST00000638157 NAP1L5Q96NT1 182 aaPredicted RBP17.57■□□□□ 0.4
GRAMD1B-216ENST00000638157 GRIN2AQ12879 1464 aa17.56■□□□□ 0.4
GRAMD1B-216ENST00000638157 SLC4A3P48751 1232 aa17.56■□□□□ 0.4
GRAMD1B-216ENST00000638157 MAGI1Q96QZ7 1491 aaPredicted RBP17.55■□□□□ 0.4
GRAMD1B-216ENST00000638157 TSPY4P0CV99 314 aa17.55■□□□□ 0.4
GRAMD1B-216ENST00000638157 TSPY10P0CW01 314 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms