RNA–Protein interactions for RNA: ENST00000636861.1

CHD2-225, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 146 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-225ENST00000636861 ADCY10Q96PN6 1610 aa6.64□□□□□ -1.35
CHD2-225ENST00000636861 STRCQ7RTU9 1775 aa6.63□□□□□ -1.35
CHD2-225ENST00000636861 LTBP4Q8N2S1 1624 aa6.63□□□□□ -1.35
CHD2-225ENST00000636861 SHROOM2Q13796 1616 aa6.62□□□□□ -1.35
CHD2-225ENST00000636861 CHMP7Q8WUX9 453 aaPredicted RBP6.62□□□□□ -1.35
CHD2-225ENST00000636861 MROH2BQ7Z745 1585 aa6.61□□□□□ -1.35
CHD2-225ENST00000636861 HRCP23327 699 aa6.61□□□□□ -1.35
CHD2-225ENST00000636861 RGS17Q9UGC6 210 aaPredicted RBP6.6□□□□□ -1.35
CHD2-225ENST00000636861 MAGI1Q96QZ7 1491 aaPredicted RBP6.6□□□□□ -1.35
CHD2-225ENST00000636861 PRDM2Q13029 1718 aa6.59□□□□□ -1.35
CHD2-225ENST00000636861 TDRD9Q8NDG6 1382 aaKnown RBP6.59□□□□□ -1.35
CHD2-225ENST00000636861 MADDQ8WXG6 1647 aa6.59□□□□□ -1.35
CHD2-225ENST00000636861 IQSEC2Q5JU85 1478 aa6.57□□□□□ -1.36
CHD2-225ENST00000636861 RAD54L2Q9Y4B4 1467 aa6.57□□□□□ -1.36
CHD2-225ENST00000636861 PHF23Q9BUL5 403 aaPredicted RBP6.56□□□□□ -1.36
CHD2-225ENST00000636861 HSPA1LP34931 641 aa6.55□□□□□ -1.36
CHD2-225ENST00000636861 CEP350Q5VT06 3117 aa6.54□□□□□ -1.36
CHD2-225ENST00000636861 POLA1P09884 1462 aaPredicted RBP6.54□□□□□ -1.36
CHD2-225ENST00000636861 BCORL1Q5H9F3 1711 aa6.54□□□□□ -1.36
CHD2-225ENST00000636861 GLI2P10070 1586 aa6.54□□□□□ -1.36
CHD2-225ENST00000636861 DNMBPQ6XZF7 1577 aa6.54□□□□□ -1.36
CHD2-225ENST00000636861 RIMS1Q86UR5 1692 aaKnown RBP6.54□□□□□ -1.36
CHD2-225ENST00000636861 MAP3K4Q9Y6R4 1608 aa6.52□□□□□ -1.37
CHD2-225ENST00000636861 PTPRTO14522 1441 aa6.5□□□□□ -1.37
CHD2-225ENST00000636861 PBRM1Q86U86 1689 aa6.5□□□□□ -1.37
CHD2-225ENST00000636861 NUP160Q12769 1436 aa6.49□□□□□ -1.37
CHD2-225ENST00000636861 GRIN2BQ13224 1484 aa6.48□□□□□ -1.37
CHD2-225ENST00000636861 UBAP1LF5GYI3 381 aa6.48□□□□□ -1.37
CHD2-225ENST00000636861 POTEAQ6S8J7 498 aa6.48□□□□□ -1.37
CHD2-225ENST00000636861 YEATS2Q9ULM3 1422 aa6.48□□□□□ -1.37
CHD2-225ENST00000636861 WDR97A6NE52 1622 aa6.47□□□□□ -1.37
CHD2-225ENST00000636861 NPM1P06748 294 aaKnown RBP eCLIP6.47□□□□□ -1.37
CHD2-225ENST00000636861 PRG4Q92954 1404 aaPredicted RBP6.47□□□□□ -1.37
CHD2-225ENST00000636861 UPF1Q92900 1129 aaKnown RBP eCLIP6.46□□□□□ -1.38
CHD2-225ENST00000636861 GRIN2AQ12879 1464 aa6.45□□□□□ -1.38
CHD2-225ENST00000636861 ABCC8Q09428 1581 aa6.44□□□□□ -1.38
CHD2-225ENST00000636861 WIZO95785 1651 aa6.44□□□□□ -1.38
CHD2-225ENST00000636861 CFAP43Q8NDM7 1665 aa6.43□□□□□ -1.38
CHD2-225ENST00000636861 SLC34A2O95436 690 aa6.43□□□□□ -1.38
CHD2-225ENST00000636861 PREX1Q8TCU6 1659 aa6.42□□□□□ -1.38
CHD2-225ENST00000636861 ASXL2Q76L83 1435 aa6.42□□□□□ -1.38
CHD2-225ENST00000636861 TEX14Q8IWB6 1497 aa6.42□□□□□ -1.38
CHD2-225ENST00000636861 SOGA1O94964 1423 aa6.42□□□□□ -1.38
CHD2-225ENST00000636861 SETBP1Q9Y6X0 1596 aa6.41□□□□□ -1.38
CHD2-225ENST00000636861 PLPPR3Q6T4P5 718 aa6.41□□□□□ -1.38
CHD2-225ENST00000636861 EPRSP07814 1512 aaKnown RBP6.4□□□□□ -1.38
CHD2-225ENST00000636861 ALKQ9UM73 1620 aa6.4□□□□□ -1.38
CHD2-225ENST00000636861 KIAA0586Q9BVV6 1533 aa6.4□□□□□ -1.39
CHD2-225ENST00000636861 ABCC2Q92887 1545 aa6.39□□□□□ -1.39
CHD2-225ENST00000636861 CUL7Q14999 1698 aa6.39□□□□□ -1.39
CHD2-225ENST00000636861 DMRT2Q9Y5R5 561 aa6.38□□□□□ -1.39
CHD2-225ENST00000636861 SIGLEC1Q9BZZ2 1709 aa6.38□□□□□ -1.39
CHD2-225ENST00000636861 PLB1Q6P1J6 1458 aa6.37□□□□□ -1.39
CHD2-225ENST00000636861 ZEB1P37275 1124 aaPredicted RBP6.36□□□□□ -1.39
CHD2-225ENST00000636861 PIP4K2BP78356 416 aa6.36□□□□□ -1.39
CHD2-225ENST00000636861 ADAMTS12P58397 1594 aa6.35□□□□□ -1.39
CHD2-225ENST00000636861 ZNF335Q9H4Z2 1342 aaPredicted RBP6.35□□□□□ -1.39
CHD2-225ENST00000636861 SCAF1Q9H7N4 1312 aaKnown RBP6.35□□□□□ -1.39
CHD2-225ENST00000636861 FGD5Q6ZNL6 1462 aa6.34□□□□□ -1.39
CHD2-225ENST00000636861 ERICH6Q7L0X2 663 aa6.34□□□□□ -1.39
CHD2-225ENST00000636861 ABCA5Q8WWZ7 1642 aa6.34□□□□□ -1.39
CHD2-225ENST00000636861 TTC37Q6PGP7 1564 aa6.33□□□□□ -1.4
CHD2-225ENST00000636861 EP400Q96L91 3159 aa6.32□□□□□ -1.4
CHD2-225ENST00000636861 FER1L4A9Z1Z3 1794 aa6.32□□□□□ -1.4
CHD2-225ENST00000636861 RBM33Q96EV2 1170 aaKnown RBP6.32□□□□□ -1.4
CHD2-225ENST00000636861 JPH4Q96JJ6 628 aa6.32□□□□□ -1.4
CHD2-225ENST00000636861 RUSC2Q8N2Y8 1516 aa6.3□□□□□ -1.4
CHD2-225ENST00000636861 UTRNP46939 3433 aa6.3□□□□□ -1.4
CHD2-225ENST00000636861 FRMPD1Q5SYB0 1578 aa6.29□□□□□ -1.4
CHD2-225ENST00000636861 SENP3Q9H4L4 574 aaPredicted RBP6.29□□□□□ -1.4
CHD2-225ENST00000636861 SETD1BQ9UPS6 1966 aaKnown RBP6.29□□□□□ -1.4
CHD2-225ENST00000636861 MAGI3Q5TCQ9 1506 aa6.29□□□□□ -1.4
CHD2-225ENST00000636861 ARAP3Q8WWN8 1544 aa6.28□□□□□ -1.4
CHD2-225ENST00000636861 NCOA1Q15788 1441 aa6.27□□□□□ -1.41
CHD2-225ENST00000636861 CENPBP07199 599 aaPredicted RBP6.27□□□□□ -1.41
CHD2-225ENST00000636861 LRP5O75197 1615 aa6.27□□□□□ -1.41
CHD2-225ENST00000636861 ARID4BQ4LE39 1312 aaPredicted RBP6.26□□□□□ -1.41
CHD2-225ENST00000636861 KIAA0556O60303 1618 aa6.26□□□□□ -1.41
CHD2-225ENST00000636861 SENP3-EIF4A1A0A087X0R7 540 aa6.26□□□□□ -1.41
CHD2-225ENST00000636861 ARHGEF40Q8TER5 1519 aa6.25□□□□□ -1.41
CHD2-225ENST00000636861 PCDH10Q9P2E7 1040 aa6.25□□□□□ -1.41
CHD2-225ENST00000636861 CEBPAP49715 358 aaPredicted RBP6.24□□□□□ -1.41
CHD2-225ENST00000636861 ZCCHC11Q5TAX3 1644 aaKnown RBP6.24□□□□□ -1.41
CHD2-225ENST00000636861 UHRF1BP1Q6BDS2 1440 aa6.24□□□□□ -1.41
CHD2-225ENST00000636861 YY1P25490 414 aa6.23□□□□□ -1.41
CHD2-225ENST00000636861 CUX1P39880 1505 aa6.23□□□□□ -1.41
CHD2-225ENST00000636861 CD109Q6YHK3 1445 aa6.22□□□□□ -1.41
CHD2-225ENST00000636861 RAPGEF6Q8TEU7 1601 aa6.21□□□□□ -1.41
CHD2-225ENST00000636861 TOP2AP11388 1531 aaKnown RBP6.21□□□□□ -1.42
CHD2-225ENST00000636861 TOM1O60784 492 aa6.21□□□□□ -1.42
CHD2-225ENST00000636861 RAPGEF3O95398 923 aa6.21□□□□□ -1.42
CHD2-225ENST00000636861 LRRC7Q96NW7 1537 aa6.2□□□□□ -1.42
CHD2-225ENST00000636861 KDM5BQ9UGL1 1544 aa6.2□□□□□ -1.42
CHD2-225ENST00000636861 TRIM52Q96A61 297 aa6.2□□□□□ -1.42
CHD2-225ENST00000636861 UHRF1BP1LA0JNW5 1464 aa6.2□□□□□ -1.42
CHD2-225ENST00000636861 FHAD1B1AJZ9 1412 aa6.19□□□□□ -1.42
CHD2-225ENST00000636861 CAMSAP1Q5T5Y3 1602 aa6.19□□□□□ -1.42
CHD2-225ENST00000636861 PCGF6Q9BYE7 350 aa6.19□□□□□ -1.42
CHD2-225ENST00000636861 ABCA10Q8WWZ4 1543 aa6.19□□□□□ -1.42
CHD2-225ENST00000636861 ARHGEF12Q9NZN5 1544 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms