RNA–Protein interactions for RNA: ENST00000636647.1

CHRNA7-218, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 5

Gene CHRNA7, Length 917 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-218ENST00000636647 TTBK1Q5TCY1 1321 aaPredicted RBP7.72□□□□□ -1.17
CHRNA7-218ENST00000636647 CEP162Q5TB80 1403 aa7.71□□□□□ -1.17
CHRNA7-218ENST00000636647 CCER1Q8TC90 406 aaPredicted RBP7.71□□□□□ -1.18
CHRNA7-218ENST00000636647 TNIKQ9UKE5 1360 aa7.71□□□□□ -1.18
CHRNA7-218ENST00000636647 AQRO60306 1485 aaKnown RBP eCLIP7.7□□□□□ -1.18
CHRNA7-218ENST00000636647 CFTRP13569 1480 aa7.68□□□□□ -1.18
CHRNA7-218ENST00000636647 DISP3Q9P2K9 1392 aa7.68□□□□□ -1.18
CHRNA7-218ENST00000636647 NEUROD1Q13562 356 aa7.67□□□□□ -1.18
CHRNA7-218ENST00000636647 CHMP7Q8WUX9 453 aaPredicted RBP7.66□□□□□ -1.18
CHRNA7-218ENST00000636647 ACIN1Q9UKV3 1341 aaKnown RBP7.66□□□□□ -1.18
CHRNA7-218ENST00000636647 CNKSR2Q8WXI2 1034 aa7.65□□□□□ -1.18
CHRNA7-218ENST00000636647 TOPBP1Q92547 1522 aa7.64□□□□□ -1.19
CHRNA7-218ENST00000636647 EEA1Q15075 1411 aa7.64□□□□□ -1.19
CHRNA7-218ENST00000636647 UBTFP17480 764 aaKnown RBP7.64□□□□□ -1.19
CHRNA7-218ENST00000636647 SYNJ1O43426 1573 aa7.63□□□□□ -1.19
CHRNA7-218ENST00000636647 DIEXFQ68CQ4 756 aaKnown RBP7.63□□□□□ -1.19
CHRNA7-218ENST00000636647 GOLGA3Q08378 1498 aa7.62□□□□□ -1.19
CHRNA7-218ENST00000636647 GAPVD1Q14C86 1478 aa7.62□□□□□ -1.19
CHRNA7-218ENST00000636647 PIAS4Q8N2W9 510 aaPredicted RBP7.62□□□□□ -1.19
CHRNA7-218ENST00000636647 SNAPC4Q5SXM2 1469 aa7.62□□□□□ -1.19
CHRNA7-218ENST00000636647 TDRD9Q8NDG6 1382 aaKnown RBP7.61□□□□□ -1.19
CHRNA7-218ENST00000636647 CLASP1Q7Z460 1538 aa7.59□□□□□ -1.19
CHRNA7-218ENST00000636647 FKBP8Q14318 412 aa7.59□□□□□ -1.19
CHRNA7-218ENST00000636647 RAD54L2Q9Y4B4 1467 aa7.58□□□□□ -1.2
CHRNA7-218ENST00000636647 KDM4FA0A1W2PPD8 638 aa7.58□□□□□ -1.2
CHRNA7-218ENST00000636647 ZNF316A6NFI3 1004 aaPredicted RBP7.58□□□□□ -1.2
CHRNA7-218ENST00000636647 KIF21BO75037 1637 aa7.58□□□□□ -1.2
CHRNA7-218ENST00000636647 DNMBPQ6XZF7 1577 aa7.57□□□□□ -1.2
CHRNA7-218ENST00000636647 PRDM2Q13029 1718 aa7.57□□□□□ -1.2
CHRNA7-218ENST00000636647 TARBP1Q13395 1621 aaKnown RBP7.56□□□□□ -1.2
CHRNA7-218ENST00000636647 HNRNPUL2Q1KMD3 747 aaKnown RBP7.56□□□□□ -1.2
CHRNA7-218ENST00000636647 GTF3C3Q9Y5Q9 886 aa7.56□□□□□ -1.2
CHRNA7-218ENST00000636647 RAPGEF2Q9Y4G8 1499 aa7.55□□□□□ -1.2
CHRNA7-218ENST00000636647 ERCC6L2Q5T890 1561 aa7.55□□□□□ -1.2
CHRNA7-218ENST00000636647 CLIP1P30622 1438 aa7.55□□□□□ -1.2
CHRNA7-218ENST00000636647 FAM69CQ0P6D2 419 aa7.55□□□□□ -1.2
CHRNA7-218ENST00000636647 POLA1P09884 1462 aaPredicted RBP7.54□□□□□ -1.2
CHRNA7-218ENST00000636647 VPS8Q8N3P4 1428 aa7.52□□□□□ -1.2
CHRNA7-218ENST00000636647 MYT1Q01538 1121 aa7.52□□□□□ -1.21
CHRNA7-218ENST00000636647 MIER1Q8N108 512 aa7.52□□□□□ -1.21
CHRNA7-218ENST00000636647 KDM6BO15054 1643 aa7.52□□□□□ -1.21
CHRNA7-218ENST00000636647 RANGAP1P46060 587 aaPredicted RBP7.51□□□□□ -1.21
CHRNA7-218ENST00000636647 NPM1P06748 294 aaKnown RBP eCLIP7.5□□□□□ -1.21
CHRNA7-218ENST00000636647 CENPBP07199 599 aaPredicted RBP7.5□□□□□ -1.21
CHRNA7-218ENST00000636647 KIF13AQ9H1H9 1805 aa7.5□□□□□ -1.21
CHRNA7-218ENST00000636647 HECW2Q9P2P5 1572 aa7.5□□□□□ -1.21
CHRNA7-218ENST00000636647 SYNJ2O15056 1496 aa7.49□□□□□ -1.21
CHRNA7-218ENST00000636647 MAGI1Q96QZ7 1491 aaPredicted RBP7.49□□□□□ -1.21
CHRNA7-218ENST00000636647 PLCB2Q00722 1185 aa7.49□□□□□ -1.21
CHRNA7-218ENST00000636647 GRIN2BQ13224 1484 aa7.49□□□□□ -1.21
CHRNA7-218ENST00000636647 TOP2BQ02880 1626 aa7.49□□□□□ -1.21
CHRNA7-218ENST00000636647 BIVM-ERCC5R4GMW8 1640 aa7.48□□□□□ -1.21
CHRNA7-218ENST00000636647 ADGRL1O94910 1474 aa7.47□□□□□ -1.21
CHRNA7-218ENST00000636647 FGD5Q6ZNL6 1462 aa7.47□□□□□ -1.21
CHRNA7-218ENST00000636647 KANK4Q5T7N3 995 aaPredicted RBP7.46□□□□□ -1.22
CHRNA7-218ENST00000636647 YTHDC1Q96MU7 727 aaKnown RBP7.46□□□□□ -1.22
CHRNA7-218ENST00000636647 TSPOAP1O95153 1857 aa7.46□□□□□ -1.22
CHRNA7-218ENST00000636647 PRXQ9BXM0 1461 aa7.45□□□□□ -1.22
CHRNA7-218ENST00000636647 PBRM1Q86U86 1689 aa7.44□□□□□ -1.22
CHRNA7-218ENST00000636647 CUX1P39880 1505 aa7.44□□□□□ -1.22
CHRNA7-218ENST00000636647 PRKCSHP14314 528 aaPredicted RBP7.44□□□□□ -1.22
CHRNA7-218ENST00000636647 CEP170Q5SW79 1584 aa7.44□□□□□ -1.22
CHRNA7-218ENST00000636647 DHX57Q6P158 1386 aaKnown RBP7.44□□□□□ -1.22
CHRNA7-218ENST00000636647 ATXN8OSP0DMR3 200 aa7.43□□□□□ -1.22
CHRNA7-218ENST00000636647 BCANQ96GW7 911 aa7.43□□□□□ -1.22
CHRNA7-218ENST00000636647 APLP2Q06481 763 aa7.42□□□□□ -1.22
CHRNA7-218ENST00000636647 ERICH3Q5RHP9 1530 aa7.42□□□□□ -1.22
CHRNA7-218ENST00000636647 ABCC10Q5T3U5 1492 aa7.41□□□□□ -1.22
CHRNA7-218ENST00000636647 TAOK2Q9UL54 1235 aa7.4□□□□□ -1.22
CHRNA7-218ENST00000636647 PRG4Q92954 1404 aaPredicted RBP7.4□□□□□ -1.22
CHRNA7-218ENST00000636647 SPATA31D1Q6ZQQ2 1576 aa7.4□□□□□ -1.22
CHRNA7-218ENST00000636647 DIP2BQ9P265 1576 aa7.4□□□□□ -1.22
CHRNA7-218ENST00000636647 GRIN2AQ12879 1464 aa7.39□□□□□ -1.23
CHRNA7-218ENST00000636647 WDR97A6NE52 1622 aa7.38□□□□□ -1.23
CHRNA7-218ENST00000636647 ARHGAP35Q9NRY4 1499 aa7.37□□□□□ -1.23
CHRNA7-218ENST00000636647 RRBP1Q9P2E9 1410 aaKnown RBP7.37□□□□□ -1.23
CHRNA7-218ENST00000636647 IFFO2Q5TF58 517 aa7.36□□□□□ -1.23
CHRNA7-218ENST00000636647 KIF27Q86VH2 1401 aa7.35□□□□□ -1.23
CHRNA7-218ENST00000636647 CLSPNQ9HAW4 1339 aa7.34□□□□□ -1.23
CHRNA7-218ENST00000636647 RNF216Q9NWF9 866 aaPredicted RBP7.34□□□□□ -1.23
CHRNA7-218ENST00000636647 IGF1RP08069 1367 aa7.33□□□□□ -1.24
CHRNA7-218ENST00000636647 SLC4A2P04920 1241 aa7.33□□□□□ -1.24
CHRNA7-218ENST00000636647 HAP1P54257 671 aaPredicted RBP7.33□□□□□ -1.24
CHRNA7-218ENST00000636647 ADAMTS12P58397 1594 aa7.33□□□□□ -1.24
CHRNA7-218ENST00000636647 CCNB3Q8WWL7 1395 aa7.33□□□□□ -1.24
CHRNA7-218ENST00000636647 MAPKBP1O60336 1514 aa7.32□□□□□ -1.24
CHRNA7-218ENST00000636647 SHROOM2Q13796 1616 aa7.32□□□□□ -1.24
CHRNA7-218ENST00000636647 ABCA5Q8WWZ7 1642 aa7.32□□□□□ -1.24
CHRNA7-218ENST00000636647 ADCY10Q96PN6 1610 aa7.32□□□□□ -1.24
CHRNA7-218ENST00000636647 JPH4Q96JJ6 628 aa7.32□□□□□ -1.24
CHRNA7-218ENST00000636647 ITGAEP38570 1179 aa7.31□□□□□ -1.24
CHRNA7-218ENST00000636647 NUP160Q12769 1436 aa7.31□□□□□ -1.24
CHRNA7-218ENST00000636647 MYCNP04198 464 aaPredicted RBP7.3□□□□□ -1.24
CHRNA7-218ENST00000636647 KCNH8Q96L42 1107 aa7.3□□□□□ -1.24
CHRNA7-218ENST00000636647 RAB3GAP2Q9H2M9 1393 aa7.29□□□□□ -1.24
CHRNA7-218ENST00000636647 TIAM1Q13009 1591 aa7.29□□□□□ -1.24
CHRNA7-218ENST00000636647 FHAD1B1AJZ9 1412 aa7.28□□□□□ -1.24
CHRNA7-218ENST00000636647 VSIG10Q8N0Z9 540 aa7.28□□□□□ -1.24
CHRNA7-218ENST00000636647 CARMIL1Q5VZK9 1371 aa7.28□□□□□ -1.24
CHRNA7-218ENST00000636647 MAP3K1Q13233 1512 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms