RNA–Protein interactions for RNA: ENST00000636647.1

CHRNA7-218, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 5

Gene CHRNA7, Length 917 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-218ENST00000636647 CHIC1Q5VXU3 224 aa10.76□□□□□ -0.69
CHRNA7-218ENST00000636647 AEBP2Q6ZN18 517 aaPredicted RBP10.34□□□□□ -0.75
CHRNA7-218ENST00000636647 NISCHQ9Y2I1 1504 aa10.24□□□□□ -0.77
CHRNA7-218ENST00000636647 DNAJC5Q9H3Z4 198 aa9.9□□□□□ -0.82
CHRNA7-218ENST00000636647 ABCC9O60706 1549 aa9.79□□□□□ -0.84
CHRNA7-218ENST00000636647 PHF23Q9BUL5 403 aaPredicted RBP9.55□□□□□ -0.88
CHRNA7-218ENST00000636647 DNAJC5BQ9UF47 199 aa9.53□□□□□ -0.88
CHRNA7-218ENST00000636647 CCDC180Q9P1Z9 1646 aa9.19□□□□□ -0.94
CHRNA7-218ENST00000636647 PABPN1Q86U42 306 aaKnown RBP eCLIP9.09□□□□□ -0.95
CHRNA7-218ENST00000636647 RB1CC1Q8TDY2 1594 aa9.03□□□□□ -0.96
CHRNA7-218ENST00000636647 DCAF8L2P0C7V8 631 aa9.01□□□□□ -0.97
CHRNA7-218ENST00000636647 PLPPR3Q6T4P5 718 aa9.01□□□□□ -0.97
CHRNA7-218ENST00000636647 EHMT2Q96KQ7 1210 aa8.85□□□□□ -0.99
CHRNA7-218ENST00000636647 SHROOM4Q9ULL8 1493 aa8.83□□□□□ -1
CHRNA7-218ENST00000636647 CECR2Q9BXF3 1484 aa8.8□□□□□ -1
CHRNA7-218ENST00000636647 NACADO15069 1562 aa8.79□□□□□ -1
CHRNA7-218ENST00000636647 ILDR1Q86SU0 546 aaPredicted RBP8.79□□□□□ -1
CHRNA7-218ENST00000636647 UNC13AQ9UPW8 1703 aa8.77□□□□□ -1
CHRNA7-218ENST00000636647 CC2D2AQ9P2K1 1620 aa8.73□□□□□ -1.01
CHRNA7-218ENST00000636647 BICRAQ9NZM4 1560 aa8.72□□□□□ -1.01
CHRNA7-218ENST00000636647 TRIM41Q8WV44 630 aa8.7□□□□□ -1.02
CHRNA7-218ENST00000636647 SUPT5HO00267 1087 aaKnown RBP8.67□□□□□ -1.02
CHRNA7-218ENST00000636647 ZCCHC6Q5VYS8 1495 aaKnown RBP8.67□□□□□ -1.02
CHRNA7-218ENST00000636647 KCNA4P22459 653 aa8.65□□□□□ -1.02
CHRNA7-218ENST00000636647 SENP3Q9H4L4 574 aaPredicted RBP8.62□□□□□ -1.03
CHRNA7-218ENST00000636647 EIF4G1Q04637 1599 aaKnown RBP8.59□□□□□ -1.03
CHRNA7-218ENST00000636647 MYO15BQ96JP2 1530 aa8.54□□□□□ -1.04
CHRNA7-218ENST00000636647 SLC24A1O60721 1099 aa8.53□□□□□ -1.04
CHRNA7-218ENST00000636647 SCRIBQ14160 1630 aa8.53□□□□□ -1.04
CHRNA7-218ENST00000636647 ERCC6Q03468 1493 aa8.51□□□□□ -1.05
CHRNA7-218ENST00000636647 CSRNP3Q8WYN3 585 aa8.49□□□□□ -1.05
CHRNA7-218ENST00000636647 CUX2O14529 1486 aa8.47□□□□□ -1.05
CHRNA7-218ENST00000636647 ADRA2BP18089 450 aa8.42□□□□□ -1.06
CHRNA7-218ENST00000636647 DCAF1Q9Y4B6 1507 aa8.38□□□□□ -1.07
CHRNA7-218ENST00000636647 HRCP23327 699 aa8.36□□□□□ -1.07
CHRNA7-218ENST00000636647 SLC4A1APQ9BWU0 796 aaKnown RBP8.33□□□□□ -1.08
CHRNA7-218ENST00000636647 LOC105371045A0A1W2PR82 267 aa8.29□□□□□ -1.08
CHRNA7-218ENST00000636647 PCGF6Q9BYE7 350 aa8.29□□□□□ -1.08
CHRNA7-218ENST00000636647 NESP48681 1621 aa8.26□□□□□ -1.09
CHRNA7-218ENST00000636647 PPARGC1BQ86YN6 1023 aaKnown RBP8.25□□□□□ -1.09
CHRNA7-218ENST00000636647 SMARCA2P51531 1590 aa8.25□□□□□ -1.09
CHRNA7-218ENST00000636647 SOCS7O14512 581 aa8.22□□□□□ -1.09
CHRNA7-218ENST00000636647 RTN4Q9NQC3 1192 aaKnown RBP8.18□□□□□ -1.1
CHRNA7-218ENST00000636647 PPP6R1Q9UPN7 881 aa8.17□□□□□ -1.1
CHRNA7-218ENST00000636647 THOC2Q8NI27 1593 aaKnown RBP8.17□□□□□ -1.1
CHRNA7-218ENST00000636647 TRHP20396 242 aaPredicted RBP8.16□□□□□ -1.1
CHRNA7-218ENST00000636647 AMER1Q5JTC6 1135 aaPredicted RBP8.16□□□□□ -1.1
CHRNA7-218ENST00000636647 RSF1Q96T23 1441 aaPredicted RBP8.16□□□□□ -1.1
CHRNA7-218ENST00000636647 BAZ1AQ9NRL2 1556 aaPredicted RBP8.12□□□□□ -1.11
CHRNA7-218ENST00000636647 KIF21AQ7Z4S6 1674 aa8.11□□□□□ -1.11
CHRNA7-218ENST00000636647 LMTK3Q96Q04 1460 aa8.11□□□□□ -1.11
CHRNA7-218ENST00000636647 OSCARQ8IYS5 282 aa8.1□□□□□ -1.11
CHRNA7-218ENST00000636647 NCAPD3P42695 1498 aa8.1□□□□□ -1.11
CHRNA7-218ENST00000636647 TRIM26Q12899 539 aaPredicted RBP8.09□□□□□ -1.11
CHRNA7-218ENST00000636647 ATAD2BQ9ULI0 1458 aa8.07□□□□□ -1.12
CHRNA7-218ENST00000636647 BAZ1BQ9UIG0 1483 aaKnown RBP8.05□□□□□ -1.12
CHRNA7-218ENST00000636647 PDS5BQ9NTI5 1447 aa8.04□□□□□ -1.12
CHRNA7-218ENST00000636647 RIMBP3CA6NJZ7 1639 aa8.03□□□□□ -1.12
CHRNA7-218ENST00000636647 RIMBP3BA6NNM3 1639 aa8.03□□□□□ -1.12
CHRNA7-218ENST00000636647 RIMBP3Q9UFD9 1639 aa8.03□□□□□ -1.12
CHRNA7-218ENST00000636647 LAMC3Q9Y6N6 1575 aa8.03□□□□□ -1.12
CHRNA7-218ENST00000636647 PPP4R3CPQ6ZMV5 832 aa8.03□□□□□ -1.12
CHRNA7-218ENST00000636647 FAM9AQ8IZU1 332 aaPredicted RBP8.03□□□□□ -1.12
CHRNA7-218ENST00000636647 CYB5RLQ6IPT4 315 aa8.02□□□□□ -1.13
CHRNA7-218ENST00000636647 ILDR2Q71H61 639 aa8.02□□□□□ -1.13
CHRNA7-218ENST00000636647 HMGXB3Q12766 1538 aa8.02□□□□□ -1.13
CHRNA7-218ENST00000636647 MRC2Q9UBG0 1479 aa8.01□□□□□ -1.13
CHRNA7-218ENST00000636647 ZBTB22O15209 634 aa8.01□□□□□ -1.13
CHRNA7-218ENST00000636647 MROH2BQ7Z745 1585 aa8.01□□□□□ -1.13
CHRNA7-218ENST00000636647 SMARCA4P51532 1647 aa7.99□□□□□ -1.13
CHRNA7-218ENST00000636647 NCBP3Q53F19 620 aaKnown RBP7.98□□□□□ -1.13
CHRNA7-218ENST00000636647 WIZO95785 1651 aa7.97□□□□□ -1.13
CHRNA7-218ENST00000636647 ARHGEF11O15085 1522 aa7.95□□□□□ -1.14
CHRNA7-218ENST00000636647 WDR62O43379 1518 aa7.95□□□□□ -1.14
CHRNA7-218ENST00000636647 NPM3O75607 178 aaKnown RBP7.93□□□□□ -1.14
CHRNA7-218ENST00000636647 FOXD1Q16676 465 aa7.93□□□□□ -1.14
CHRNA7-218ENST00000636647 CEP164Q9UPV0 1460 aa7.93□□□□□ -1.14
CHRNA7-218ENST00000636647 ZEB1P37275 1124 aaPredicted RBP7.91□□□□□ -1.14
CHRNA7-218ENST00000636647 CADPSQ9ULU8 1353 aa7.89□□□□□ -1.15
CHRNA7-218ENST00000636647 FBLN2P98095 1184 aa7.89□□□□□ -1.15
CHRNA7-218ENST00000636647 FANCD2Q9BXW9 1451 aa7.86□□□□□ -1.15
CHRNA7-218ENST00000636647 ARAP1Q96P48 1450 aa7.83□□□□□ -1.16
CHRNA7-218ENST00000636647 ABCC8Q09428 1581 aa7.81□□□□□ -1.16
CHRNA7-218ENST00000636647 POTEDQ86YR6 584 aa7.81□□□□□ -1.16
CHRNA7-218ENST00000636647 FBXO41Q8TF61 875 aa7.81□□□□□ -1.16
CHRNA7-218ENST00000636647 ZNF608Q9ULD9 1512 aaPredicted RBP7.81□□□□□ -1.16
CHRNA7-218ENST00000636647 CCDC88BA6NC98 1476 aa7.81□□□□□ -1.16
CHRNA7-218ENST00000636647 TOP2AP11388 1531 aaKnown RBP7.8□□□□□ -1.16
CHRNA7-218ENST00000636647 URB2Q14146 1524 aaKnown RBP7.8□□□□□ -1.16
CHRNA7-218ENST00000636647 SCAF1Q9H7N4 1312 aaKnown RBP7.79□□□□□ -1.16
CHRNA7-218ENST00000636647 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.79□□□□□ -1.16
CHRNA7-218ENST00000636647 PEG3Q9GZU2 1588 aa7.78□□□□□ -1.16
CHRNA7-218ENST00000636647 CHD1O14646 1710 aa7.77□□□□□ -1.17
CHRNA7-218ENST00000636647 RUSC2Q8N2Y8 1516 aa7.77□□□□□ -1.17
CHRNA7-218ENST00000636647 FOXD4L1Q9NU39 408 aa7.76□□□□□ -1.17
CHRNA7-218ENST00000636647 SOGA1O94964 1423 aa7.76□□□□□ -1.17
CHRNA7-218ENST00000636647 EIF4G3O43432 1585 aaKnown RBP7.74□□□□□ -1.17
CHRNA7-218ENST00000636647 WRNQ14191 1432 aaPredicted RBP eCLIP7.73□□□□□ -1.17
CHRNA7-218ENST00000636647 IFT140Q96RY7 1462 aa7.73□□□□□ -1.17
CHRNA7-218ENST00000636647 PELP1Q8IZL8 1130 aaKnown RBP7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms