RNA–Protein interactions for RNA: ENST00000636610.1

CACNA1A-228, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,011 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-228ENST00000636610 SUPT16HQ9Y5B9 1047 aaKnown RBP20.19■□□□□ 0.82
CACNA1A-228ENST00000636610 FGD5Q6ZNL6 1462 aa20.18■□□□□ 0.82
CACNA1A-228ENST00000636610 CADPSQ9ULU8 1353 aa20.17■□□□□ 0.82
CACNA1A-228ENST00000636610 FHOD3Q2V2M9 1422 aa20.15■□□□□ 0.82
CACNA1A-228ENST00000636610 RAD54L2Q9Y4B4 1467 aa20.14■□□□□ 0.81
CACNA1A-228ENST00000636610 ARID3CA6NKF2 412 aa20.11■□□□□ 0.81
CACNA1A-228ENST00000636610 SETD5Q9C0A6 1442 aa20.1■□□□□ 0.81
CACNA1A-228ENST00000636610 LRRC9Q6ZRR7 1453 aa20.07■□□□□ 0.8
CACNA1A-228ENST00000636610 MAPKBP1O60336 1514 aa20.05■□□□□ 0.8
CACNA1A-228ENST00000636610 TRIM52Q96A61 297 aa20.05■□□□□ 0.8
CACNA1A-228ENST00000636610 TIAM1Q13009 1591 aa20.05■□□□□ 0.8
CACNA1A-228ENST00000636610 NESP48681 1621 aa20.04■□□□□ 0.8
CACNA1A-228ENST00000636610 WDR97A6NE52 1622 aa20.01■□□□□ 0.79
CACNA1A-228ENST00000636610 FANCD2Q9BXW9 1451 aa20.01■□□□□ 0.79
CACNA1A-228ENST00000636610 DNAJC5BQ9UF47 199 aa20■□□□□ 0.79
CACNA1A-228ENST00000636610 CHIC2Q9UKJ5 165 aa19.99■□□□□ 0.79
CACNA1A-228ENST00000636610 TDRD9Q8NDG6 1382 aaKnown RBP19.99■□□□□ 0.79
CACNA1A-228ENST00000636610 FKBP8Q14318 412 aa19.97■□□□□ 0.79
CACNA1A-228ENST00000636610 FHAD1B1AJZ9 1412 aa19.96■□□□□ 0.79
CACNA1A-228ENST00000636610 PCF11O94913 1555 aaKnown RBP19.96■□□□□ 0.79
CACNA1A-228ENST00000636610 MTUS2Q5JR59 1369 aa19.92■□□□□ 0.78
CACNA1A-228ENST00000636610 RRP7BPQ9NSQ0 103 aa19.92■□□□□ 0.78
CACNA1A-228ENST00000636610 PPP1R15AO75807 674 aaPredicted RBP19.92■□□□□ 0.78
CACNA1A-228ENST00000636610 CC2D2AQ9P2K1 1620 aa19.91■□□□□ 0.78
CACNA1A-228ENST00000636610 POLA1P09884 1462 aaPredicted RBP19.89■□□□□ 0.77
CACNA1A-228ENST00000636610 TONSLQ96HA7 1378 aa19.88■□□□□ 0.77
CACNA1A-228ENST00000636610 TSHZ2Q9NRE2 1034 aa19.87■□□□□ 0.77
CACNA1A-228ENST00000636610 ANP32CO43423 234 aa19.86■□□□□ 0.77
CACNA1A-228ENST00000636610 CNGB1Q14028 1251 aaPredicted RBP19.84■□□□□ 0.77
CACNA1A-228ENST00000636610 TOPBP1Q92547 1522 aa19.83■□□□□ 0.77
CACNA1A-228ENST00000636610 FOXD1Q16676 465 aa19.82■□□□□ 0.76
CACNA1A-228ENST00000636610 PTPRKQ15262 1439 aa19.82■□□□□ 0.76
CACNA1A-228ENST00000636610 IRX6P78412 446 aaPredicted RBP19.79■□□□□ 0.76
CACNA1A-228ENST00000636610 FGD6Q6ZV73 1430 aa19.79■□□□□ 0.76
CACNA1A-228ENST00000636610 CASKIN1Q8WXD9 1431 aa19.78■□□□□ 0.76
CACNA1A-228ENST00000636610 MAP3K1Q13233 1512 aa19.78■□□□□ 0.76
CACNA1A-228ENST00000636610 PRDM2Q13029 1718 aa19.75■□□□□ 0.75
CACNA1A-228ENST00000636610 CCDC18Q5T9S5 1454 aa19.75■□□□□ 0.75
CACNA1A-228ENST00000636610 NEFLP07196 543 aa19.75■□□□□ 0.75
CACNA1A-228ENST00000636610 ABCA10Q8WWZ4 1543 aa19.74■□□□□ 0.75
CACNA1A-228ENST00000636610 FYCO1Q9BQS8 1478 aa19.74■□□□□ 0.75
CACNA1A-228ENST00000636610 DNMBPQ6XZF7 1577 aa19.72■□□□□ 0.75
CACNA1A-228ENST00000636610 FMN1Q68DA7 1419 aa19.72■□□□□ 0.75
CACNA1A-228ENST00000636610 AQRO60306 1485 aaKnown RBP eCLIP19.71■□□□□ 0.75
CACNA1A-228ENST00000636610 HNRNPUQ00839 825 aaKnown RBP eCLIP19.7■□□□□ 0.74
CACNA1A-228ENST00000636610 CFAP43Q8NDM7 1665 aa19.7■□□□□ 0.74
CACNA1A-228ENST00000636610 URB2Q14146 1524 aaKnown RBP19.69■□□□□ 0.74
CACNA1A-228ENST00000636610 NCOA2Q15596 1464 aa19.68■□□□□ 0.74
CACNA1A-228ENST00000636610 SENP3-EIF4A1A0A087X0R7 540 aa19.67■□□□□ 0.74
CACNA1A-228ENST00000636610 TIMELESSQ9UNS1 1208 aa19.67■□□□□ 0.74
CACNA1A-228ENST00000636610 HSPA5P11021 654 aaKnown RBP19.65■□□□□ 0.74
CACNA1A-228ENST00000636610 GAPVD1Q14C86 1478 aa19.65■□□□□ 0.74
CACNA1A-228ENST00000636610 SNAPC4Q5SXM2 1469 aa19.64■□□□□ 0.73
CACNA1A-228ENST00000636610 NAIPQ13075 1403 aa19.64■□□□□ 0.73
CACNA1A-228ENST00000636610 POLR3GLQ9BT43 218 aa19.63■□□□□ 0.73
CACNA1A-228ENST00000636610 EFCAB5A4FU69 1503 aa19.61■□□□□ 0.73
CACNA1A-228ENST00000636610 MYOM3Q5VTT5 1437 aa19.61■□□□□ 0.73
CACNA1A-228ENST00000636610 UACAQ9BZF9 1416 aa19.61■□□□□ 0.73
CACNA1A-228ENST00000636610 CCDC184Q52MB2 194 aa19.61■□□□□ 0.73
CACNA1A-228ENST00000636610 MYT1Q01538 1121 aa19.61■□□□□ 0.73
CACNA1A-228ENST00000636610 HFM1A2PYH4 1435 aa19.61■□□□□ 0.73
CACNA1A-228ENST00000636610 CCER2I3L3R5 266 aa19.6■□□□□ 0.73
CACNA1A-228ENST00000636610 ZNF644Q9H582 1327 aaPredicted RBP19.59■□□□□ 0.73
CACNA1A-228ENST00000636610 FAM9BQ8IZU0 186 aa19.58■□□□□ 0.73
CACNA1A-228ENST00000636610 WASHC2AQ641Q2 1341 aa19.58■□□□□ 0.73
CACNA1A-228ENST00000636610 ZNF326Q5BKZ1 582 aaKnown RBP19.58■□□□□ 0.72
CACNA1A-228ENST00000636610 L3MBTL2Q969R5 705 aa19.58■□□□□ 0.72
CACNA1A-228ENST00000636610 MPHOSPH9Q99550 1183 aa19.56■□□□□ 0.72
CACNA1A-228ENST00000636610 PTPN23Q9H3S7 1636 aa19.55■□□□□ 0.72
CACNA1A-228ENST00000636610 C11orf95C9JLR9 678 aaPredicted RBP19.55■□□□□ 0.72
CACNA1A-228ENST00000636610 CTTNBP2Q8WZ74 1663 aa19.55■□□□□ 0.72
CACNA1A-228ENST00000636610 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.54■□□□□ 0.72
CACNA1A-228ENST00000636610 ZNF777Q9ULD5 760 aaPredicted RBP19.54■□□□□ 0.72
CACNA1A-228ENST00000636610 MAGI3Q5TCQ9 1506 aa19.53■□□□□ 0.72
CACNA1A-228ENST00000636610 CUL7Q14999 1698 aa19.53■□□□□ 0.72
CACNA1A-228ENST00000636610 EIF4G2P78344 907 aaKnown RBP eCLIP19.52■□□□□ 0.72
CACNA1A-228ENST00000636610 CDK13Q14004 1512 aaKnown RBP19.52■□□□□ 0.72
CACNA1A-228ENST00000636610 RBM19Q9Y4C8 960 aaKnown RBP19.51■□□□□ 0.71
CACNA1A-228ENST00000636610 GRIN2BQ13224 1484 aa19.51■□□□□ 0.71
CACNA1A-228ENST00000636610 LRRIQ1Q96JM4 1722 aa19.51■□□□□ 0.71
CACNA1A-228ENST00000636610 FBLN2P98095 1184 aa19.51■□□□□ 0.71
CACNA1A-228ENST00000636610 PDS5BQ9NTI5 1447 aa19.48■□□□□ 0.71
CACNA1A-228ENST00000636610 SLC4A1APQ9BWU0 796 aaKnown RBP19.48■□□□□ 0.71
CACNA1A-228ENST00000636610 NBPF8Q3BBV2 869 aa19.47■□□□□ 0.71
CACNA1A-228ENST00000636610 KDM6BO15054 1643 aa19.46■□□□□ 0.71
CACNA1A-228ENST00000636610 ANP32EQ9BTT0 268 aa19.45■□□□□ 0.7
CACNA1A-228ENST00000636610 MRS2Q9HD23 443 aa19.44■□□□□ 0.7
CACNA1A-228ENST00000636610 SUPT6HQ7KZ85 1726 aaKnown RBP19.43■□□□□ 0.7
CACNA1A-228ENST00000636610 SAMD9Q5K651 1589 aa19.41■□□□□ 0.7
CACNA1A-228ENST00000636610 DENND4BO75064 1496 aaPredicted RBP19.41■□□□□ 0.7
CACNA1A-228ENST00000636610 EHBP1L1Q8N3D4 1523 aa19.4■□□□□ 0.7
CACNA1A-228ENST00000636610 ABCA5Q8WWZ7 1642 aa19.4■□□□□ 0.7
CACNA1A-228ENST00000636610 LAMC3Q9Y6N6 1575 aa19.39■□□□□ 0.7
CACNA1A-228ENST00000636610 UGGT2Q9NYU1 1516 aa19.39■□□□□ 0.69
CACNA1A-228ENST00000636610 EPRSP07814 1512 aaKnown RBP19.39■□□□□ 0.69
CACNA1A-228ENST00000636610 KDM5BQ9UGL1 1544 aa19.39■□□□□ 0.69
CACNA1A-228ENST00000636610 KIF21AQ7Z4S6 1674 aa19.36■□□□□ 0.69
CACNA1A-228ENST00000636610 THOC2Q8NI27 1593 aaKnown RBP19.36■□□□□ 0.69
CACNA1A-228ENST00000636610 PRKRIP1Q9H875 184 aaPredicted RBP19.35■□□□□ 0.69
CACNA1A-228ENST00000636610 B4GALNT3Q6L9W6 998 aa19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms