RNA–Protein interactions for RNA: ENST00000636065.1

KCNQ2-223, Transcript of potassium voltage-gated channel subfamily Q member 2, human

TSL 5

Gene KCNQ2, Length 145 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KCNQ2-223	ENST00000636065	LRRC9	Q6ZRR7	1453 aa		11.33	□□□□□ -0.6
KCNQ2-223	ENST00000636065	CFTR	P13569	1480 aa		11.32	□□□□□ -0.6
KCNQ2-223	ENST00000636065	CCER2	I3L3R5	266 aa		11.32	□□□□□ -0.6
KCNQ2-223	ENST00000636065	EFCAB5	A4FU69	1503 aa		11.3	□□□□□ -0.6
KCNQ2-223	ENST00000636065	DROSHA	Q9NRR4	1374 aa	Known RBP eCLIP	11.29	□□□□□ -0.6
KCNQ2-223	ENST00000636065	FYCO1	Q9BQS8	1478 aa		11.29	□□□□□ -0.6
KCNQ2-223	ENST00000636065	PCF11	O94913	1555 aa	Known RBP	11.28	□□□□□ -0.6
KCNQ2-223	ENST00000636065	ANP32C	O43423	234 aa		11.28	□□□□□ -0.6
KCNQ2-223	ENST00000636065	WDR97	A6NE52	1622 aa		11.27	□□□□□ -0.6
KCNQ2-223	ENST00000636065	AQR	O60306	1485 aa	Known RBP eCLIP	11.26	□□□□□ -0.61
KCNQ2-223	ENST00000636065	ITGAE	P38570	1179 aa		11.26	□□□□□ -0.61
KCNQ2-223	ENST00000636065	FKBP8	Q14318	412 aa		11.26	□□□□□ -0.61
KCNQ2-223	ENST00000636065	TONSL	Q96HA7	1378 aa		11.23	□□□□□ -0.61
KCNQ2-223	ENST00000636065	CARMIL1	Q5VZK9	1371 aa		11.22	□□□□□ -0.61
KCNQ2-223	ENST00000636065	PHLDB1	Q86UU1	1377 aa		11.22	□□□□□ -0.61
KCNQ2-223	ENST00000636065	CUL7	Q14999	1698 aa		11.21	□□□□□ -0.61
KCNQ2-223	ENST00000636065	CC2D2A	Q9P2K1	1620 aa		11.21	□□□□□ -0.61
KCNQ2-223	ENST00000636065	FGD5	Q6ZNL6	1462 aa		11.21	□□□□□ -0.61
KCNQ2-223	ENST00000636065	FAM50A	Q14320	339 aa	Known RBP	11.21	□□□□□ -0.61
KCNQ2-223	ENST00000636065	BCAN	Q96GW7	911 aa		11.21	□□□□□ -0.61
KCNQ2-223	ENST00000636065	CASKIN1	Q8WXD9	1431 aa		11.2	□□□□□ -0.62
KCNQ2-223	ENST00000636065	IGF1R	P08069	1367 aa		11.2	□□□□□ -0.62
KCNQ2-223	ENST00000636065	PPP1R15A	O75807	674 aa	Predicted RBP	11.2	□□□□□ -0.62
KCNQ2-223	ENST00000636065	DDX10	Q13206	875 aa	Known RBP	11.2	□□□□□ -0.62
KCNQ2-223	ENST00000636065	MYT1L	Q9UL68	1186 aa		11.19	□□□□□ -0.62
KCNQ2-223	ENST00000636065	THOC2	Q8NI27	1593 aa	Known RBP	11.19	□□□□□ -0.62
KCNQ2-223	ENST00000636065	CCDC18	Q5T9S5	1454 aa		11.19	□□□□□ -0.62
KCNQ2-223	ENST00000636065	ERICH6	Q7L0X2	663 aa		11.18	□□□□□ -0.62
KCNQ2-223	ENST00000636065	FMN1	Q68DA7	1419 aa		11.18	□□□□□ -0.62
KCNQ2-223	ENST00000636065	CTTNBP2	Q8WZ74	1663 aa		11.17	□□□□□ -0.62
KCNQ2-223	ENST00000636065	UACA	Q9BZF9	1416 aa		11.17	□□□□□ -0.62
KCNQ2-223	ENST00000636065	ERICH6B	Q5W0A0	696 aa		11.16	□□□□□ -0.62
KCNQ2-223	ENST00000636065	KIF21A	Q7Z4S6	1674 aa		11.16	□□□□□ -0.62
KCNQ2-223	ENST00000636065	FGD6	Q6ZV73	1430 aa		11.16	□□□□□ -0.62
KCNQ2-223	ENST00000636065	BCL11A	Q9H165	835 aa		11.15	□□□□□ -0.62
KCNQ2-223	ENST00000636065	PTPN23	Q9H3S7	1636 aa		11.15	□□□□□ -0.62
KCNQ2-223	ENST00000636065	HFM1	A2PYH4	1435 aa		11.15	□□□□□ -0.62
KCNQ2-223	ENST00000636065	RBM19	Q9Y4C8	960 aa	Known RBP	11.14	□□□□□ -0.63
KCNQ2-223	ENST00000636065	FANCI	Q9NVI1	1328 aa		11.13	□□□□□ -0.63
KCNQ2-223	ENST00000636065	DNMBP	Q6XZF7	1577 aa		11.13	□□□□□ -0.63
KCNQ2-223	ENST00000636065	KCNH8	Q96L42	1107 aa		11.13	□□□□□ -0.63
KCNQ2-223	ENST00000636065	CDK11A	Q9UQ88	783 aa	Predicted RBP	11.13	□□□□□ -0.63
KCNQ2-223	ENST00000636065	EHBP1L1	Q8N3D4	1523 aa		11.13	□□□□□ -0.63
KCNQ2-223	ENST00000636065	CADPS	Q9ULU8	1353 aa		11.13	□□□□□ -0.63
KCNQ2-223	ENST00000636065	FHOD3	Q2V2M9	1422 aa		11.11	□□□□□ -0.63
KCNQ2-223	ENST00000636065	HECW1	Q76N89	1606 aa		11.11	□□□□□ -0.63
KCNQ2-223	ENST00000636065	SIN3A	Q96ST3	1273 aa		11.11	□□□□□ -0.63
KCNQ2-223	ENST00000636065	SUPT6H	Q7KZ85	1726 aa	Known RBP	11.11	□□□□□ -0.63
KCNQ2-223	ENST00000636065	ABCA10	Q8WWZ4	1543 aa		11.1	□□□□□ -0.63
KCNQ2-223	ENST00000636065	MTUS2	Q5JR59	1369 aa		11.1	□□□□□ -0.63
KCNQ2-223	ENST00000636065	GCC2	Q8IWJ2	1684 aa		11.09	□□□□□ -0.63
KCNQ2-223	ENST00000636065	AKNA	Q7Z591	1439 aa		11.09	□□□□□ -0.63
KCNQ2-223	ENST00000636065	TRIM52	Q96A61	297 aa		11.08	□□□□□ -0.64
KCNQ2-223	ENST00000636065	MYOM3	Q5VTT5	1437 aa		11.08	□□□□□ -0.64
KCNQ2-223	ENST00000636065	SNAPC4	Q5SXM2	1469 aa		11.07	□□□□□ -0.64
KCNQ2-223	ENST00000636065	SAMD9	Q5K651	1589 aa		11.07	□□□□□ -0.64
KCNQ2-223	ENST00000636065	NCOA2	Q15596	1464 aa		11.06	□□□□□ -0.64
KCNQ2-223	ENST00000636065	ATP1B4	Q9UN42	357 aa	Predicted RBP	11.06	□□□□□ -0.64
KCNQ2-223	ENST00000636065	CNTLN	Q9NXG0	1405 aa		11.06	□□□□□ -0.64
KCNQ2-223	ENST00000636065	HNRNPU	Q00839	825 aa	Known RBP eCLIP	11.05	□□□□□ -0.64
KCNQ2-223	ENST00000636065	FANCD2	Q9BXW9	1451 aa		11.05	□□□□□ -0.64
KCNQ2-223	ENST00000636065	NAIP	Q13075	1403 aa		11.03	□□□□□ -0.64
KCNQ2-223	ENST00000636065	PPP4R2	Q9NY27	417 aa		11.03	□□□□□ -0.64
KCNQ2-223	ENST00000636065	TCOF1	Q13428	1488 aa	Known RBP	11.02	□□□□□ -0.65
KCNQ2-223	ENST00000636065	UGGT2	Q9NYU1	1516 aa		11.02	□□□□□ -0.65
KCNQ2-223	ENST00000636065	GRIN2B	Q13224	1484 aa		11.01	□□□□□ -0.65
KCNQ2-223	ENST00000636065	TOPBP1	Q92547	1522 aa		11	□□□□□ -0.65
KCNQ2-223	ENST00000636065	KDM5B	Q9UGL1	1544 aa		11	□□□□□ -0.65
KCNQ2-223	ENST00000636065	POLA1	P09884	1462 aa	Predicted RBP	11	□□□□□ -0.65
KCNQ2-223	ENST00000636065	EIF4G2	P78344	907 aa	Known RBP eCLIP	10.99	□□□□□ -0.65
KCNQ2-223	ENST00000636065	ARHGEF11	O15085	1522 aa		10.99	□□□□□ -0.65
KCNQ2-223	ENST00000636065	ABCA5	Q8WWZ7	1642 aa		10.98	□□□□□ -0.65
KCNQ2-223	ENST00000636065	P3H3	Q8IVL6	736 aa		10.98	□□□□□ -0.65
KCNQ2-223	ENST00000636065	POLR1A	O95602	1720 aa	Predicted RBP	10.96	□□□□□ -0.65
KCNQ2-223	ENST00000636065	ZBED9	Q6R2W3	1325 aa		10.96	□□□□□ -0.65
KCNQ2-223	ENST00000636065	HIRIP3	Q9BW71	556 aa	Predicted RBP	10.96	□□□□□ -0.65
KCNQ2-223	ENST00000636065	PTPRK	Q15262	1439 aa		10.95	□□□□□ -0.66
KCNQ2-223	ENST00000636065	NCOA1	Q15788	1441 aa		10.95	□□□□□ -0.66
KCNQ2-223	ENST00000636065	MIA2	Q96PC5	1412 aa		10.95	□□□□□ -0.66
KCNQ2-223	ENST00000636065	HSPA5	P11021	654 aa	Known RBP	10.95	□□□□□ -0.66
KCNQ2-223	ENST00000636065	RAD54L2	Q9Y4B4	1467 aa		10.94	□□□□□ -0.66
KCNQ2-223	ENST00000636065	CCDC7	Q96M83	1385 aa		10.93	□□□□□ -0.66
KCNQ2-223	ENST00000636065	LRRIQ1	Q96JM4	1722 aa		10.93	□□□□□ -0.66
KCNQ2-223	ENST00000636065	WASHC2A	Q641Q2	1341 aa		10.92	□□□□□ -0.66
KCNQ2-223	ENST00000636065	MSH5	O43196	834 aa		10.92	□□□□□ -0.66
KCNQ2-223	ENST00000636065	NES	P48681	1621 aa		10.91	□□□□□ -0.66
KCNQ2-223	ENST00000636065	LAMC3	Q9Y6N6	1575 aa		10.9	□□□□□ -0.66
KCNQ2-223	ENST00000636065	ROCK1	Q13464	1354 aa		10.9	□□□□□ -0.67
KCNQ2-223	ENST00000636065	MRS2	Q9HD23	443 aa		10.89	□□□□□ -0.67
KCNQ2-223	ENST00000636065	SMG6	Q86US8	1419 aa	Known RBP	10.89	□□□□□ -0.67
KCNQ2-223	ENST00000636065	GAPVD1	Q14C86	1478 aa		10.88	□□□□□ -0.67
KCNQ2-223	ENST00000636065	RPRD2	Q5VT52	1461 aa	Known RBP	10.88	□□□□□ -0.67
KCNQ2-223	ENST00000636065	IRX6	P78412	446 aa	Predicted RBP	10.88	□□□□□ -0.67
KCNQ2-223	ENST00000636065	NOP58	Q9Y2X3	529 aa	Known RBP	10.88	□□□□□ -0.67
KCNQ2-223	ENST00000636065	TEX14	Q8IWB6	1497 aa		10.87	□□□□□ -0.67
KCNQ2-223	ENST00000636065	ANP32A	P39687	249 aa	Known RBP	10.87	□□□□□ -0.67
KCNQ2-223	ENST00000636065	PRKRIP1	Q9H875	184 aa	Predicted RBP	10.87	□□□□□ -0.67
KCNQ2-223	ENST00000636065	DNMT1	P26358	1616 aa	Known RBP	10.86	□□□□□ -0.67
KCNQ2-223	ENST00000636065	IQGAP2	Q13576	1575 aa		10.86	□□□□□ -0.67
KCNQ2-223	ENST00000636065	WDR62	O43379	1518 aa		10.85	□□□□□ -0.67

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