RNA–Protein interactions for RNA: ENST00000636065.1

KCNQ2-223, Transcript of potassium voltage-gated channel subfamily Q member 2, human

TSL 5

Gene KCNQ2, Length 145 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KCNQ2-223	ENST00000636065	NISCH	Q9Y2I1	1504 aa		15.81	■□□□□ 0.12
KCNQ2-223	ENST00000636065	CCDC180	Q9P1Z9	1646 aa		13.5	□□□□□ -0.25
KCNQ2-223	ENST00000636065	ZCCHC6	Q5VYS8	1495 aa	Known RBP	13.48	□□□□□ -0.25
KCNQ2-223	ENST00000636065	SHROOM4	Q9ULL8	1493 aa		13.47	□□□□□ -0.25
KCNQ2-223	ENST00000636065	SUPT5H	O00267	1087 aa	Known RBP	13.33	□□□□□ -0.28
KCNQ2-223	ENST00000636065	HRC	P23327	699 aa		13.27	□□□□□ -0.29
KCNQ2-223	ENST00000636065	MYO15B	Q96JP2	1530 aa		13.13	□□□□□ -0.31
KCNQ2-223	ENST00000636065	DCAF1	Q9Y4B6	1507 aa		13.13	□□□□□ -0.31
KCNQ2-223	ENST00000636065	CHIC1	Q5VXU3	224 aa		13.12	□□□□□ -0.31
KCNQ2-223	ENST00000636065	PCGF6	Q9BYE7	350 aa		12.95	□□□□□ -0.34
KCNQ2-223	ENST00000636065	ABCC9	O60706	1549 aa		12.83	□□□□□ -0.35
KCNQ2-223	ENST00000636065	ZEB1	P37275	1124 aa	Predicted RBP	12.81	□□□□□ -0.36
KCNQ2-223	ENST00000636065	TRIM26	Q12899	539 aa	Predicted RBP	12.79	□□□□□ -0.36
KCNQ2-223	ENST00000636065	DCAF8L2	P0C7V8	631 aa		12.78	□□□□□ -0.36
KCNQ2-223	ENST00000636065	PELP1	Q8IZL8	1130 aa	Known RBP	12.77	□□□□□ -0.37
KCNQ2-223	ENST00000636065	PPARGC1B	Q86YN6	1023 aa	Known RBP	12.72	□□□□□ -0.37
KCNQ2-223	ENST00000636065	LOC105371045	A0A1W2PR82	267 aa		12.6	□□□□□ -0.39
KCNQ2-223	ENST00000636065	RB1CC1	Q8TDY2	1594 aa		12.59	□□□□□ -0.39
KCNQ2-223	ENST00000636065	RSF1	Q96T23	1441 aa	Predicted RBP	12.54	□□□□□ -0.4
KCNQ2-223	ENST00000636065	SCRIB	Q14160	1630 aa		12.52	□□□□□ -0.4
KCNQ2-223	ENST00000636065	TRIM41	Q8WV44	630 aa		12.5	□□□□□ -0.41
KCNQ2-223	ENST00000636065	NACAD	O15069	1562 aa		12.36	□□□□□ -0.43
KCNQ2-223	ENST00000636065	MYT1	Q01538	1121 aa		12.33	□□□□□ -0.44
KCNQ2-223	ENST00000636065	BAZ1A	Q9NRL2	1556 aa	Predicted RBP	12.3	□□□□□ -0.44
KCNQ2-223	ENST00000636065	SCAF1	Q9H7N4	1312 aa	Known RBP	12.29	□□□□□ -0.44
KCNQ2-223	ENST00000636065	FAM9A	Q8IZU1	332 aa	Predicted RBP	12.27	□□□□□ -0.45
KCNQ2-223	ENST00000636065	CENPB	P07199	599 aa	Predicted RBP	12.26	□□□□□ -0.45
KCNQ2-223	ENST00000636065	EIF4G1	Q04637	1599 aa	Known RBP	12.25	□□□□□ -0.45
KCNQ2-223	ENST00000636065	MROH2B	Q7Z745	1585 aa		12.22	□□□□□ -0.45
KCNQ2-223	ENST00000636065	WRN	Q14191	1432 aa	Predicted RBP eCLIP	12.21	□□□□□ -0.45
KCNQ2-223	ENST00000636065	ACIN1	Q9UKV3	1341 aa	Known RBP	12.2	□□□□□ -0.46
KCNQ2-223	ENST00000636065	CCER1	Q8TC90	406 aa	Predicted RBP	12.2	□□□□□ -0.46
KCNQ2-223	ENST00000636065	WIZ	O95785	1651 aa		12.18	□□□□□ -0.46
KCNQ2-223	ENST00000636065	EEA1	Q15075	1411 aa		12.17	□□□□□ -0.46
KCNQ2-223	ENST00000636065	CECR2	Q9BXF3	1484 aa		12.16	□□□□□ -0.46
KCNQ2-223	ENST00000636065	TOP2A	P11388	1531 aa	Known RBP	12.16	□□□□□ -0.46
KCNQ2-223	ENST00000636065	DIEXF	Q68CQ4	756 aa	Known RBP	12.09	□□□□□ -0.47
KCNQ2-223	ENST00000636065	CEP162	Q5TB80	1403 aa		12.09	□□□□□ -0.47
KCNQ2-223	ENST00000636065	HNRNPUL2-BSCL2	H3BQZ7	746 aa	Predicted RBP	12.07	□□□□□ -0.48
KCNQ2-223	ENST00000636065	EHMT2	Q96KQ7	1210 aa		12.07	□□□□□ -0.48
KCNQ2-223	ENST00000636065	TNIK	Q9UKE5	1360 aa		12.06	□□□□□ -0.48
KCNQ2-223	ENST00000636065	NEUROD1	Q13562	356 aa		12.03	□□□□□ -0.48
KCNQ2-223	ENST00000636065	SMARCA4	P51532	1647 aa		12.03	□□□□□ -0.48
KCNQ2-223	ENST00000636065	GOLGA3	Q08378	1498 aa		12.02	□□□□□ -0.48
KCNQ2-223	ENST00000636065	SMARCA2	P51531	1590 aa		12.01	□□□□□ -0.49
KCNQ2-223	ENST00000636065	GTF3C3	Q9Y5Q9	886 aa		11.99	□□□□□ -0.49
KCNQ2-223	ENST00000636065	ABCC8	Q09428	1581 aa		11.98	□□□□□ -0.49
KCNQ2-223	ENST00000636065	ZNF316	A6NFI3	1004 aa	Predicted RBP	11.97	□□□□□ -0.49
KCNQ2-223	ENST00000636065	CCDC88B	A6NC98	1476 aa		11.96	□□□□□ -0.49
KCNQ2-223	ENST00000636065	KIF21B	O75037	1637 aa		11.94	□□□□□ -0.5
KCNQ2-223	ENST00000636065	CEP164	Q9UPV0	1460 aa		11.93	□□□□□ -0.5
KCNQ2-223	ENST00000636065	CLSPN	Q9HAW4	1339 aa		11.92	□□□□□ -0.5
KCNQ2-223	ENST00000636065	CSRNP3	Q8WYN3	585 aa		11.89	□□□□□ -0.51
KCNQ2-223	ENST00000636065	BAZ1B	Q9UIG0	1483 aa	Known RBP	11.89	□□□□□ -0.51
KCNQ2-223	ENST00000636065	SOGA1	O94964	1423 aa		11.88	□□□□□ -0.51
KCNQ2-223	ENST00000636065	UBTF	P17480	764 aa	Known RBP	11.86	□□□□□ -0.51
KCNQ2-223	ENST00000636065	VPS8	Q8N3P4	1428 aa		11.84	□□□□□ -0.51
KCNQ2-223	ENST00000636065	CLIP1	P30622	1438 aa		11.83	□□□□□ -0.52
KCNQ2-223	ENST00000636065	PEG3	Q9GZU2	1588 aa		11.82	□□□□□ -0.52
KCNQ2-223	ENST00000636065	TTBK1	Q5TCY1	1321 aa	Predicted RBP	11.81	□□□□□ -0.52
KCNQ2-223	ENST00000636065	APLP2	Q06481	763 aa		11.8	□□□□□ -0.52
KCNQ2-223	ENST00000636065	UNC13A	Q9UPW8	1703 aa		11.78	□□□□□ -0.52
KCNQ2-223	ENST00000636065	YTHDC1	Q96MU7	727 aa	Known RBP	11.76	□□□□□ -0.53
KCNQ2-223	ENST00000636065	RUSC2	Q8N2Y8	1516 aa		11.75	□□□□□ -0.53
KCNQ2-223	ENST00000636065	SYNJ1	O43426	1573 aa		11.75	□□□□□ -0.53
KCNQ2-223	ENST00000636065	ERICH3	Q5RHP9	1530 aa		11.71	□□□□□ -0.53
KCNQ2-223	ENST00000636065	MIER1	Q8N108	512 aa		11.7	□□□□□ -0.54
KCNQ2-223	ENST00000636065	HNRNPUL2	Q1KMD3	747 aa	Known RBP	11.69	□□□□□ -0.54
KCNQ2-223	ENST00000636065	TOP2B	Q02880	1626 aa		11.66	□□□□□ -0.54
KCNQ2-223	ENST00000636065	BIVM-ERCC5	R4GMW8	1640 aa		11.64	□□□□□ -0.55
KCNQ2-223	ENST00000636065	RAPGEF2	Q9Y4G8	1499 aa		11.64	□□□□□ -0.55
KCNQ2-223	ENST00000636065	CUX2	O14529	1486 aa		11.61	□□□□□ -0.55
KCNQ2-223	ENST00000636065	BICRA	Q9NZM4	1560 aa		11.61	□□□□□ -0.55
KCNQ2-223	ENST00000636065	DHX57	Q6P158	1386 aa	Known RBP	11.6	□□□□□ -0.55
KCNQ2-223	ENST00000636065	ATAD2B	Q9ULI0	1458 aa		11.59	□□□□□ -0.55
KCNQ2-223	ENST00000636065	RRBP1	Q9P2E9	1410 aa	Known RBP	11.58	□□□□□ -0.56
KCNQ2-223	ENST00000636065	ARAP1	Q96P48	1450 aa		11.57	□□□□□ -0.56
KCNQ2-223	ENST00000636065	PRX	Q9BXM0	1461 aa		11.56	□□□□□ -0.56
KCNQ2-223	ENST00000636065	SUPT16H	Q9Y5B9	1047 aa	Known RBP	11.52	□□□□□ -0.57
KCNQ2-223	ENST00000636065	CCNB3	Q8WWL7	1395 aa		11.5	□□□□□ -0.57
KCNQ2-223	ENST00000636065	KIF27	Q86VH2	1401 aa		11.5	□□□□□ -0.57
KCNQ2-223	ENST00000636065	MAP3K1	Q13233	1512 aa		11.5	□□□□□ -0.57
KCNQ2-223	ENST00000636065	HMGXB3	Q12766	1538 aa		11.48	□□□□□ -0.57
KCNQ2-223	ENST00000636065	TIAM1	Q13009	1591 aa		11.42	□□□□□ -0.58
KCNQ2-223	ENST00000636065	NEFL	P07196	543 aa		11.42	□□□□□ -0.58
KCNQ2-223	ENST00000636065	PABPN1	Q86U42	306 aa	Known RBP eCLIP	11.42	□□□□□ -0.58
KCNQ2-223	ENST00000636065	CUX1	P39880	1505 aa		11.41	□□□□□ -0.58
KCNQ2-223	ENST00000636065	RANGAP1	P46060	587 aa	Predicted RBP	11.41	□□□□□ -0.58
KCNQ2-223	ENST00000636065	ANP32E	Q9BTT0	268 aa		11.41	□□□□□ -0.58
KCNQ2-223	ENST00000636065	CFAP43	Q8NDM7	1665 aa		11.4	□□□□□ -0.58
KCNQ2-223	ENST00000636065	ARHGAP35	Q9NRY4	1499 aa		11.4	□□□□□ -0.58
KCNQ2-223	ENST00000636065	PRDM2	Q13029	1718 aa		11.4	□□□□□ -0.58
KCNQ2-223	ENST00000636065	TSHZ2	Q9NRE2	1034 aa		11.39	□□□□□ -0.59
KCNQ2-223	ENST00000636065	MAPKBP1	O60336	1514 aa		11.39	□□□□□ -0.59
KCNQ2-223	ENST00000636065	SETD5	Q9C0A6	1442 aa		11.38	□□□□□ -0.59
KCNQ2-223	ENST00000636065	TIMELESS	Q9UNS1	1208 aa		11.38	□□□□□ -0.59
KCNQ2-223	ENST00000636065	RAB3GAP2	Q9H2M9	1393 aa		11.38	□□□□□ -0.59
KCNQ2-223	ENST00000636065	FHAD1	B1AJZ9	1412 aa		11.37	□□□□□ -0.59
KCNQ2-223	ENST00000636065	KANK4	Q5T7N3	995 aa	Predicted RBP	11.36	□□□□□ -0.59
KCNQ2-223	ENST00000636065	NCAPD3	P42695	1498 aa		11.34	□□□□□ -0.59

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