RNA–Protein interactions for RNA: ENST00000627541.1

ZCCHC17-209, Transcript of zinc finger CCHC-type containing 17, humanhuman

TSL 5 BASIC

Gene ZCCHC17, Length 1,158 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZCCHC17-209ENST00000627541 RIMBP3CA6NJZ7 1639 aa13.37□□□□□ -0.27
ZCCHC17-209ENST00000627541 RIMBP3BA6NNM3 1639 aa13.37□□□□□ -0.27
ZCCHC17-209ENST00000627541 RIMBP3Q9UFD9 1639 aa13.37□□□□□ -0.27
ZCCHC17-209ENST00000627541 CFTRP13569 1480 aa13.34□□□□□ -0.27
ZCCHC17-209ENST00000627541 RBM42Q9BTD8 480 aaKnown RBP13.33□□□□□ -0.28
ZCCHC17-209ENST00000627541 VASPP50552 380 aaPredicted RBP13.31□□□□□ -0.28
ZCCHC17-209ENST00000627541 KIF21AQ7Z4S6 1674 aa13.31□□□□□ -0.28
ZCCHC17-209ENST00000627541 LAMC3Q9Y6N6 1575 aa13.29□□□□□ -0.28
ZCCHC17-209ENST00000627541 RTN4Q9NQC3 1192 aaKnown RBP13.28□□□□□ -0.28
ZCCHC17-209ENST00000627541 STAG3Q9UJ98 1225 aa13.25□□□□□ -0.29
ZCCHC17-209ENST00000627541 WRNQ14191 1432 aaPredicted RBP eCLIP13.24□□□□□ -0.29
ZCCHC17-209ENST00000627541 ARHGEF11O15085 1522 aa13.23□□□□□ -0.29
ZCCHC17-209ENST00000627541 WDR62O43379 1518 aa13.23□□□□□ -0.29
ZCCHC17-209ENST00000627541 ABCC8Q09428 1581 aa13.23□□□□□ -0.29
ZCCHC17-209ENST00000627541 PDS5BQ9NTI5 1447 aa13.22□□□□□ -0.29
ZCCHC17-209ENST00000627541 FANCD2Q9BXW9 1451 aa13.22□□□□□ -0.29
ZCCHC17-209ENST00000627541 ILDR1Q86SU0 546 aaPredicted RBP13.19□□□□□ -0.3
ZCCHC17-209ENST00000627541 AKT1S1Q96B36 256 aa13.18□□□□□ -0.3
ZCCHC17-209ENST00000627541 MRC2Q9UBG0 1479 aa13.16□□□□□ -0.3
ZCCHC17-209ENST00000627541 CEP164Q9UPV0 1460 aa13.16□□□□□ -0.3
ZCCHC17-209ENST00000627541 FAM9AQ8IZU1 332 aaPredicted RBP13.13□□□□□ -0.31
ZCCHC17-209ENST00000627541 IFNLR1Q8IU57 520 aaPredicted RBP13.11□□□□□ -0.31
ZCCHC17-209ENST00000627541 SYNJ1O43426 1573 aa13.08□□□□□ -0.32
ZCCHC17-209ENST00000627541 PLCD3Q8N3E9 789 aa13.08□□□□□ -0.32
ZCCHC17-209ENST00000627541 SPDYE1Q8NFV5 336 aaPredicted RBP13.08□□□□□ -0.32
ZCCHC17-209ENST00000627541 CUX1P39880 1505 aa13.08□□□□□ -0.32
ZCCHC17-209ENST00000627541 ARAP1Q96P48 1450 aa13.05□□□□□ -0.32
ZCCHC17-209ENST00000627541 PLEKHG5O94827 1062 aa13.04□□□□□ -0.32
ZCCHC17-209ENST00000627541 MIER1Q8N108 512 aa13.04□□□□□ -0.32
ZCCHC17-209ENST00000627541 TOP2BQ02880 1626 aa13.03□□□□□ -0.32
ZCCHC17-209ENST00000627541 KLHL34Q8N239 644 aa13.03□□□□□ -0.32
ZCCHC17-209ENST00000627541 PRDM2Q13029 1718 aa13.02□□□□□ -0.32
ZCCHC17-209ENST00000627541 REM2Q8IYK8 340 aaPredicted RBP13.02□□□□□ -0.33
ZCCHC17-209ENST00000627541 TOPBP1Q92547 1522 aa13.02□□□□□ -0.33
ZCCHC17-209ENST00000627541 URB2Q14146 1524 aaKnown RBP13.01□□□□□ -0.33
ZCCHC17-209ENST00000627541 DNMBPQ6XZF7 1577 aa13.01□□□□□ -0.33
ZCCHC17-209ENST00000627541 FGD5Q6ZNL6 1462 aa13□□□□□ -0.33
ZCCHC17-209ENST00000627541 SOGA1O94964 1423 aa13□□□□□ -0.33
ZCCHC17-209ENST00000627541 CYB5RLQ6IPT4 315 aa12.98□□□□□ -0.33
ZCCHC17-209ENST00000627541 ZBTB47Q9UFB7 747 aaPredicted RBP12.98□□□□□ -0.33
ZCCHC17-209ENST00000627541 BIVM-ERCC5R4GMW8 1640 aa12.98□□□□□ -0.33
ZCCHC17-209ENST00000627541 CLEC11AQ9Y240 323 aa12.97□□□□□ -0.33
ZCCHC17-209ENST00000627541 EEA1Q15075 1411 aa12.96□□□□□ -0.33
ZCCHC17-209ENST00000627541 SPOCK2Q92563 424 aa12.96□□□□□ -0.33
ZCCHC17-209ENST00000627541 POLA1P09884 1462 aaPredicted RBP12.95□□□□□ -0.34
ZCCHC17-209ENST00000627541 KIF27Q86VH2 1401 aa12.95□□□□□ -0.34
ZCCHC17-209ENST00000627541 RAD54L2Q9Y4B4 1467 aa12.93□□□□□ -0.34
ZCCHC17-209ENST00000627541 PRR29P0C7W0 189 aa12.92□□□□□ -0.34
ZCCHC17-209ENST00000627541 LOC105371045A0A1W2PR82 267 aa12.91□□□□□ -0.34
ZCCHC17-209ENST00000627541 RUSC2Q8N2Y8 1516 aa12.91□□□□□ -0.34
ZCCHC17-209ENST00000627541 PITPNM1O00562 1244 aa12.87□□□□□ -0.35
ZCCHC17-209ENST00000627541 TDRD9Q8NDG6 1382 aaKnown RBP12.86□□□□□ -0.35
ZCCHC17-209ENST00000627541 ABCA10Q8WWZ4 1543 aa12.86□□□□□ -0.35
ZCCHC17-209ENST00000627541 IFT140Q96RY7 1462 aa12.85□□□□□ -0.35
ZCCHC17-209ENST00000627541 UBTFP17480 764 aaKnown RBP12.84□□□□□ -0.35
ZCCHC17-209ENST00000627541 IGF1RP08069 1367 aa12.81□□□□□ -0.36
ZCCHC17-209ENST00000627541 GAPVD1Q14C86 1478 aa12.79□□□□□ -0.36
ZCCHC17-209ENST00000627541 PKD2Q13563 968 aa12.79□□□□□ -0.36
ZCCHC17-209ENST00000627541 GOLGA3Q08378 1498 aa12.78□□□□□ -0.36
ZCCHC17-209ENST00000627541 CREBZFQ9NS37 354 aa12.78□□□□□ -0.36
ZCCHC17-209ENST00000627541 AQRO60306 1485 aaKnown RBP eCLIP12.78□□□□□ -0.36
ZCCHC17-209ENST00000627541 CARMIL1Q5VZK9 1371 aa12.77□□□□□ -0.37
ZCCHC17-209ENST00000627541 ZNF608Q9ULD9 1512 aaPredicted RBP12.75□□□□□ -0.37
ZCCHC17-209ENST00000627541 TARBP1Q13395 1621 aaKnown RBP12.74□□□□□ -0.37
ZCCHC17-209ENST00000627541 PRXQ9BXM0 1461 aa12.73□□□□□ -0.37
ZCCHC17-209ENST00000627541 CHD1O14646 1710 aa12.73□□□□□ -0.37
ZCCHC17-209ENST00000627541 GRIN2BQ13224 1484 aa12.72□□□□□ -0.37
ZCCHC17-209ENST00000627541 RAPGEF2Q9Y4G8 1499 aa12.72□□□□□ -0.37
ZCCHC17-209ENST00000627541 RANGAP1P46060 587 aaPredicted RBP12.71□□□□□ -0.37
ZCCHC17-209ENST00000627541 TNIKQ9UKE5 1360 aa12.7□□□□□ -0.38
ZCCHC17-209ENST00000627541 KIF21BO75037 1637 aa12.7□□□□□ -0.38
ZCCHC17-209ENST00000627541 ERICH3Q5RHP9 1530 aa12.7□□□□□ -0.38
ZCCHC17-209ENST00000627541 ABCA5Q8WWZ7 1642 aa12.7□□□□□ -0.38
ZCCHC17-209ENST00000627541 ECM2O94769 699 aaPredicted RBP12.69□□□□□ -0.38
ZCCHC17-209ENST00000627541 CIZ1Q9ULV3 898 aaPredicted RBP12.69□□□□□ -0.38
ZCCHC17-209ENST00000627541 WDR97A6NE52 1622 aa12.69□□□□□ -0.38
ZCCHC17-209ENST00000627541 MNX1P50219 401 aaPredicted RBP12.68□□□□□ -0.38
ZCCHC17-209ENST00000627541 EIF4G3O43432 1585 aaKnown RBP12.68□□□□□ -0.38
ZCCHC17-209ENST00000627541 FHAD1B1AJZ9 1412 aa12.67□□□□□ -0.38
ZCCHC17-209ENST00000627541 SNAPC4Q5SXM2 1469 aa12.66□□□□□ -0.38
ZCCHC17-209ENST00000627541 CHMP7Q8WUX9 453 aaPredicted RBP12.66□□□□□ -0.38
ZCCHC17-209ENST00000627541 NPM1P06748 294 aaKnown RBP eCLIP12.65□□□□□ -0.38
ZCCHC17-209ENST00000627541 GSE1Q14687 1217 aa12.65□□□□□ -0.38
ZCCHC17-209ENST00000627541 CLASP1Q7Z460 1538 aa12.65□□□□□ -0.38
ZCCHC17-209ENST00000627541 NUBP1P53384 320 aa12.64□□□□□ -0.39
ZCCHC17-209ENST00000627541 CEP162Q5TB80 1403 aa12.63□□□□□ -0.39
ZCCHC17-209ENST00000627541 ERCC6L2Q5T890 1561 aa12.63□□□□□ -0.39
ZCCHC17-209ENST00000627541 CUL7Q14999 1698 aa12.63□□□□□ -0.39
ZCCHC17-209ENST00000627541 KDM4FA0A1W2PPD8 638 aa12.62□□□□□ -0.39
ZCCHC17-209ENST00000627541 FAM212AQ96EL1 285 aa12.62□□□□□ -0.39
ZCCHC17-209ENST00000627541 MAGI1Q96QZ7 1491 aaPredicted RBP12.61□□□□□ -0.39
ZCCHC17-209ENST00000627541 CHRDL2Q6WN34 429 aa12.6□□□□□ -0.39
ZCCHC17-209ENST00000627541 CLIP1P30622 1438 aa12.6□□□□□ -0.39
ZCCHC17-209ENST00000627541 CHADLQ6NUI6 762 aa12.59□□□□□ -0.39
ZCCHC17-209ENST00000627541 ADAMTS12P58397 1594 aa12.59□□□□□ -0.39
ZCCHC17-209ENST00000627541 SYNJ2O15056 1496 aa12.58□□□□□ -0.4
ZCCHC17-209ENST00000627541 FXR2P51116 673 aaKnown RBP eCLIP12.57□□□□□ -0.4
ZCCHC17-209ENST00000627541 DCAF8Q5TAQ9 597 aa12.57□□□□□ -0.4
ZCCHC17-209ENST00000627541 PBRM1Q86U86 1689 aa12.57□□□□□ -0.4
ZCCHC17-209ENST00000627541 PRKAR2AP13861 404 aaKnown RBP12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms