RNA–Protein interactions for RNA: ENST00000620507.4

RBFOX1-223, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 5 BASIC

Gene RBFOX1, Length 4,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-223ENST00000620507 TONSLQ96HA7 1378 aa13.04□□□□□ -0.32
RBFOX1-223ENST00000620507 CHIC2Q9UKJ5 165 aa13.03□□□□□ -0.32
RBFOX1-223ENST00000620507 PDS5BQ9NTI5 1447 aa13.02□□□□□ -0.32
RBFOX1-223ENST00000620507 ANP32CO43423 234 aa13.02□□□□□ -0.33
RBFOX1-223ENST00000620507 DDX10Q13206 875 aaKnown RBP13.02□□□□□ -0.33
RBFOX1-223ENST00000620507 CDK11AQ9UQ88 783 aaPredicted RBP13.02□□□□□ -0.33
RBFOX1-223ENST00000620507 DHX57Q6P158 1386 aaKnown RBP13.01□□□□□ -0.33
RBFOX1-223ENST00000620507 FHOD3Q2V2M9 1422 aa13□□□□□ -0.33
RBFOX1-223ENST00000620507 RAB3GAP2Q9H2M9 1393 aa13□□□□□ -0.33
RBFOX1-223ENST00000620507 ARHGAP35Q9NRY4 1499 aa13□□□□□ -0.33
RBFOX1-223ENST00000620507 SIN3AQ96ST3 1273 aa13□□□□□ -0.33
RBFOX1-223ENST00000620507 SETD5Q9C0A6 1442 aa12.99□□□□□ -0.33
RBFOX1-223ENST00000620507 BIVM-ERCC5R4GMW8 1640 aa12.99□□□□□ -0.33
RBFOX1-223ENST00000620507 RAD54L2Q9Y4B4 1467 aa12.99□□□□□ -0.33
RBFOX1-223ENST00000620507 CC2D2AQ9P2K1 1620 aa12.97□□□□□ -0.33
RBFOX1-223ENST00000620507 FMN1Q68DA7 1419 aa12.97□□□□□ -0.33
RBFOX1-223ENST00000620507 POLR3GLQ9BT43 218 aa12.96□□□□□ -0.33
RBFOX1-223ENST00000620507 RRP7BPQ9NSQ0 103 aa12.96□□□□□ -0.33
RBFOX1-223ENST00000620507 HIRIP3Q9BW71 556 aaPredicted RBP12.96□□□□□ -0.34
RBFOX1-223ENST00000620507 ZNF777Q9ULD5 760 aaPredicted RBP12.95□□□□□ -0.34
RBFOX1-223ENST00000620507 CHMP7Q8WUX9 453 aaPredicted RBP12.93□□□□□ -0.34
RBFOX1-223ENST00000620507 NESP48681 1621 aa12.92□□□□□ -0.34
RBFOX1-223ENST00000620507 RRBP1Q9P2E9 1410 aaKnown RBP12.92□□□□□ -0.34
RBFOX1-223ENST00000620507 CNGB1Q14028 1251 aaPredicted RBP12.91□□□□□ -0.34
RBFOX1-223ENST00000620507 TIMELESSQ9UNS1 1208 aa12.89□□□□□ -0.35
RBFOX1-223ENST00000620507 LRRC9Q6ZRR7 1453 aa12.88□□□□□ -0.35
RBFOX1-223ENST00000620507 ZNF326Q5BKZ1 582 aaKnown RBP12.88□□□□□ -0.35
RBFOX1-223ENST00000620507 PHLDB1Q86UU1 1377 aa12.87□□□□□ -0.35
RBFOX1-223ENST00000620507 TOPBP1Q92547 1522 aa12.87□□□□□ -0.35
RBFOX1-223ENST00000620507 POLA1P09884 1462 aaPredicted RBP12.87□□□□□ -0.35
RBFOX1-223ENST00000620507 GAPVD1Q14C86 1478 aa12.86□□□□□ -0.35
RBFOX1-223ENST00000620507 BCANQ96GW7 911 aa12.85□□□□□ -0.35
RBFOX1-223ENST00000620507 DNMBPQ6XZF7 1577 aa12.83□□□□□ -0.36
RBFOX1-223ENST00000620507 ERCC6Q03468 1493 aa12.81□□□□□ -0.36
RBFOX1-223ENST00000620507 TIAM1Q13009 1591 aa12.81□□□□□ -0.36
RBFOX1-223ENST00000620507 CASKIN1Q8WXD9 1431 aa12.81□□□□□ -0.36
RBFOX1-223ENST00000620507 SLC4A1APQ9BWU0 796 aaKnown RBP12.81□□□□□ -0.36
RBFOX1-223ENST00000620507 ABCA10Q8WWZ4 1543 aa12.81□□□□□ -0.36
RBFOX1-223ENST00000620507 PPP1R15AO75807 674 aaPredicted RBP12.8□□□□□ -0.36
RBFOX1-223ENST00000620507 CFDP1Q9UEE9 299 aaPredicted RBP12.79□□□□□ -0.36
RBFOX1-223ENST00000620507 MYT1LQ9UL68 1186 aa12.79□□□□□ -0.36
RBFOX1-223ENST00000620507 EIF4G2P78344 907 aaKnown RBP eCLIP12.78□□□□□ -0.36
RBFOX1-223ENST00000620507 FYCO1Q9BQS8 1478 aa12.78□□□□□ -0.36
RBFOX1-223ENST00000620507 PLEKHD1A6NEE1 506 aa12.77□□□□□ -0.36
RBFOX1-223ENST00000620507 EFCAB5A4FU69 1503 aa12.77□□□□□ -0.37
RBFOX1-223ENST00000620507 FGD6Q6ZV73 1430 aa12.76□□□□□ -0.37
RBFOX1-223ENST00000620507 TSPY4P0CV99 314 aa12.76□□□□□ -0.37
RBFOX1-223ENST00000620507 TSPY10P0CW01 314 aa12.76□□□□□ -0.37
RBFOX1-223ENST00000620507 FKBP8Q14318 412 aa12.76□□□□□ -0.37
RBFOX1-223ENST00000620507 DNAJC5BQ9UF47 199 aa12.76□□□□□ -0.37
RBFOX1-223ENST00000620507 HNRNPUQ00839 825 aaKnown RBP eCLIP12.74□□□□□ -0.37
RBFOX1-223ENST00000620507 MAP3K1Q13233 1512 aa12.74□□□□□ -0.37
RBFOX1-223ENST00000620507 AQRO60306 1485 aaKnown RBP eCLIP12.74□□□□□ -0.37
RBFOX1-223ENST00000620507 ERICH6Q7L0X2 663 aa12.73□□□□□ -0.37
RBFOX1-223ENST00000620507 LAMC3Q9Y6N6 1575 aa12.73□□□□□ -0.37
RBFOX1-223ENST00000620507 CCDC18Q5T9S5 1454 aa12.71□□□□□ -0.37
RBFOX1-223ENST00000620507 MYOM3Q5VTT5 1437 aa12.71□□□□□ -0.37
RBFOX1-223ENST00000620507 PCF11O94913 1555 aaKnown RBP12.71□□□□□ -0.38
RBFOX1-223ENST00000620507 MPHOSPH9Q99550 1183 aa12.7□□□□□ -0.38
RBFOX1-223ENST00000620507 FOXD1Q16676 465 aa12.69□□□□□ -0.38
RBFOX1-223ENST00000620507 URB2Q14146 1524 aaKnown RBP12.69□□□□□ -0.38
RBFOX1-223ENST00000620507 NCOA2Q15596 1464 aa12.69□□□□□ -0.38
RBFOX1-223ENST00000620507 CUL7Q14999 1698 aa12.68□□□□□ -0.38
RBFOX1-223ENST00000620507 FAM9BQ8IZU0 186 aa12.68□□□□□ -0.38
RBFOX1-223ENST00000620507 SUPT16HQ9Y5B9 1047 aaKnown RBP12.66□□□□□ -0.38
RBFOX1-223ENST00000620507 CARMIL2Q6F5E8 1435 aa12.66□□□□□ -0.38
RBFOX1-223ENST00000620507 CCER2I3L3R5 266 aa12.66□□□□□ -0.38
RBFOX1-223ENST00000620507 KCNH8Q96L42 1107 aa12.65□□□□□ -0.38
RBFOX1-223ENST00000620507 KDM2AQ9Y2K7 1162 aa12.65□□□□□ -0.38
RBFOX1-223ENST00000620507 UACAQ9BZF9 1416 aa12.65□□□□□ -0.38
RBFOX1-223ENST00000620507 MRS2Q9HD23 443 aa12.65□□□□□ -0.38
RBFOX1-223ENST00000620507 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.65□□□□□ -0.38
RBFOX1-223ENST00000620507 GRIN2BQ13224 1484 aa12.65□□□□□ -0.38
RBFOX1-223ENST00000620507 HSPA5P11021 654 aaKnown RBP12.65□□□□□ -0.39
RBFOX1-223ENST00000620507 JPH4Q96JJ6 628 aa12.64□□□□□ -0.39
RBFOX1-223ENST00000620507 PRDM2Q13029 1718 aa12.64□□□□□ -0.39
RBFOX1-223ENST00000620507 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.64□□□□□ -0.39
RBFOX1-223ENST00000620507 L3MBTL2Q969R5 705 aa12.62□□□□□ -0.39
RBFOX1-223ENST00000620507 MRC2Q9UBG0 1479 aa12.62□□□□□ -0.39
RBFOX1-223ENST00000620507 HFM1A2PYH4 1435 aa12.6□□□□□ -0.39
RBFOX1-223ENST00000620507 EHBP1L1Q8N3D4 1523 aa12.59□□□□□ -0.39
RBFOX1-223ENST00000620507 ZNF644Q9H582 1327 aaPredicted RBP12.58□□□□□ -0.4
RBFOX1-223ENST00000620507 PKD2Q13563 968 aa12.58□□□□□ -0.4
RBFOX1-223ENST00000620507 IFT140Q96RY7 1462 aa12.56□□□□□ -0.4
RBFOX1-223ENST00000620507 WDR97A6NE52 1622 aa12.56□□□□□ -0.4
RBFOX1-223ENST00000620507 ANKRD30AQ9BXX3 1397 aa12.55□□□□□ -0.4
RBFOX1-223ENST00000620507 TMC1Q8TDI8 760 aa12.55□□□□□ -0.4
RBFOX1-223ENST00000620507 NAIPQ13075 1403 aa12.55□□□□□ -0.4
RBFOX1-223ENST00000620507 SUPT6HQ7KZ85 1726 aaKnown RBP12.55□□□□□ -0.4
RBFOX1-223ENST00000620507 CARD11Q9BXL7 1154 aa12.55□□□□□ -0.4
RBFOX1-223ENST00000620507 RGL3Q3MIN7 710 aa12.54□□□□□ -0.4
RBFOX1-223ENST00000620507 IRX6P78412 446 aaPredicted RBP12.54□□□□□ -0.4
RBFOX1-223ENST00000620507 IQGAP2Q13576 1575 aa12.54□□□□□ -0.4
RBFOX1-223ENST00000620507 EPRSP07814 1512 aaKnown RBP12.53□□□□□ -0.4
RBFOX1-223ENST00000620507 HECW1Q76N89 1606 aa12.53□□□□□ -0.4
RBFOX1-223ENST00000620507 MAPKBP1O60336 1514 aa12.53□□□□□ -0.4
RBFOX1-223ENST00000620507 MIA2Q96PC5 1412 aa12.52□□□□□ -0.4
RBFOX1-223ENST00000620507 NUP155O75694 1391 aa12.52□□□□□ -0.4
RBFOX1-223ENST00000620507 CTTNBP2Q8WZ74 1663 aa12.51□□□□□ -0.41
RBFOX1-223ENST00000620507 BCL11AQ9H165 835 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms