RNA–Protein interactions for RNA: ENST00000619887.4

CDH23-213, Transcript of cadherin related 23, humanhuman

TSL 1 (best) BASIC

Gene CDH23, Length 4,224 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-213ENST00000619887 CDK11AQ9UQ88 783 aaPredicted RBP14.14□□□□□ -0.15
CDH23-213ENST00000619887 GTF3C3Q9Y5Q9 886 aa14.13□□□□□ -0.15
CDH23-213ENST00000619887 TRIM52Q96A61 297 aa14.13□□□□□ -0.15
CDH23-213ENST00000619887 ARHGAP35Q9NRY4 1499 aa14.12□□□□□ -0.15
CDH23-213ENST00000619887 DNMBPQ6XZF7 1577 aa14.1□□□□□ -0.15
CDH23-213ENST00000619887 TDRD9Q8NDG6 1382 aaKnown RBP14.1□□□□□ -0.15
CDH23-213ENST00000619887 SETD5Q9C0A6 1442 aa14.09□□□□□ -0.15
CDH23-213ENST00000619887 RAD54L2Q9Y4B4 1467 aa14.08□□□□□ -0.16
CDH23-213ENST00000619887 TONSLQ96HA7 1378 aa14.08□□□□□ -0.16
CDH23-213ENST00000619887 FHOD3Q2V2M9 1422 aa14.08□□□□□ -0.16
CDH23-213ENST00000619887 TOPBP1Q92547 1522 aa14.07□□□□□ -0.16
CDH23-213ENST00000619887 ARID3CA6NKF2 412 aa14.07□□□□□ -0.16
CDH23-213ENST00000619887 NEFLP07196 543 aa14.07□□□□□ -0.16
CDH23-213ENST00000619887 MIER1Q8N108 512 aa14.07□□□□□ -0.16
CDH23-213ENST00000619887 RRBP1Q9P2E9 1410 aaKnown RBP14.06□□□□□ -0.16
CDH23-213ENST00000619887 DHX57Q6P158 1386 aaKnown RBP14.06□□□□□ -0.16
CDH23-213ENST00000619887 SCAF1Q9H7N4 1312 aaKnown RBP14.05□□□□□ -0.16
CDH23-213ENST00000619887 POLA1P09884 1462 aaPredicted RBP14.04□□□□□ -0.16
CDH23-213ENST00000619887 RAB3GAP2Q9H2M9 1393 aa14.03□□□□□ -0.16
CDH23-213ENST00000619887 ABCA10Q8WWZ4 1543 aa14.03□□□□□ -0.16
CDH23-213ENST00000619887 GAPVD1Q14C86 1478 aa14.03□□□□□ -0.16
CDH23-213ENST00000619887 PRDM2Q13029 1718 aa14.03□□□□□ -0.16
CDH23-213ENST00000619887 TIMELESSQ9UNS1 1208 aa14.03□□□□□ -0.16
CDH23-213ENST00000619887 EFCAB5A4FU69 1503 aa14.03□□□□□ -0.16
CDH23-213ENST00000619887 LAMC3Q9Y6N6 1575 aa14.02□□□□□ -0.16
CDH23-213ENST00000619887 NESP48681 1621 aa14.01□□□□□ -0.17
CDH23-213ENST00000619887 ANP32CO43423 234 aa14.01□□□□□ -0.17
CDH23-213ENST00000619887 LRRC9Q6ZRR7 1453 aa14.01□□□□□ -0.17
CDH23-213ENST00000619887 CHMP7Q8WUX9 453 aaPredicted RBP14□□□□□ -0.17
CDH23-213ENST00000619887 MAP3K1Q13233 1512 aa13.99□□□□□ -0.17
CDH23-213ENST00000619887 TIAM1Q13009 1591 aa13.98□□□□□ -0.17
CDH23-213ENST00000619887 FYCO1Q9BQS8 1478 aa13.98□□□□□ -0.17
CDH23-213ENST00000619887 CASKIN1Q8WXD9 1431 aa13.98□□□□□ -0.17
CDH23-213ENST00000619887 ERCC6Q03468 1493 aa13.97□□□□□ -0.17
CDH23-213ENST00000619887 CUL7Q14999 1698 aa13.97□□□□□ -0.17
CDH23-213ENST00000619887 CHIC2Q9UKJ5 165 aa13.95□□□□□ -0.18
CDH23-213ENST00000619887 PHLDB1Q86UU1 1377 aa13.92□□□□□ -0.18
CDH23-213ENST00000619887 DDX10Q13206 875 aaKnown RBP13.91□□□□□ -0.18
CDH23-213ENST00000619887 RRP7BPQ9NSQ0 103 aa13.91□□□□□ -0.18
CDH23-213ENST00000619887 SIN3AQ96ST3 1273 aa13.9□□□□□ -0.18
CDH23-213ENST00000619887 ZNF777Q9ULD5 760 aaPredicted RBP13.89□□□□□ -0.19
CDH23-213ENST00000619887 AQRO60306 1485 aaKnown RBP eCLIP13.89□□□□□ -0.19
CDH23-213ENST00000619887 FGD6Q6ZV73 1430 aa13.87□□□□□ -0.19
CDH23-213ENST00000619887 CCDC18Q5T9S5 1454 aa13.87□□□□□ -0.19
CDH23-213ENST00000619887 MRC2Q9UBG0 1479 aa13.86□□□□□ -0.19
CDH23-213ENST00000619887 URB2Q14146 1524 aaKnown RBP13.86□□□□□ -0.19
CDH23-213ENST00000619887 PCF11O94913 1555 aaKnown RBP13.85□□□□□ -0.19
CDH23-213ENST00000619887 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.85□□□□□ -0.19
CDH23-213ENST00000619887 ZNF326Q5BKZ1 582 aaKnown RBP13.85□□□□□ -0.19
CDH23-213ENST00000619887 ERICH6Q7L0X2 663 aa13.85□□□□□ -0.19
CDH23-213ENST00000619887 GRIN2BQ13224 1484 aa13.84□□□□□ -0.19
CDH23-213ENST00000619887 PLEKHD1A6NEE1 506 aa13.83□□□□□ -0.2
CDH23-213ENST00000619887 MYOM3Q5VTT5 1437 aa13.83□□□□□ -0.2
CDH23-213ENST00000619887 CARMIL2Q6F5E8 1435 aa13.83□□□□□ -0.2
CDH23-213ENST00000619887 SLC4A1APQ9BWU0 796 aaKnown RBP13.82□□□□□ -0.2
CDH23-213ENST00000619887 CFDP1Q9UEE9 299 aaPredicted RBP13.82□□□□□ -0.2
CDH23-213ENST00000619887 TSPY4P0CV99 314 aa13.8□□□□□ -0.2
CDH23-213ENST00000619887 TSPY10P0CW01 314 aa13.8□□□□□ -0.2
CDH23-213ENST00000619887 IFT140Q96RY7 1462 aa13.8□□□□□ -0.2
CDH23-213ENST00000619887 EHBP1L1Q8N3D4 1523 aa13.79□□□□□ -0.2
CDH23-213ENST00000619887 NCOA2Q15596 1464 aa13.79□□□□□ -0.2
CDH23-213ENST00000619887 PPP1R15AO75807 674 aaPredicted RBP13.79□□□□□ -0.2
CDH23-213ENST00000619887 EIF4G2P78344 907 aaKnown RBP eCLIP13.79□□□□□ -0.2
CDH23-213ENST00000619887 CTTNBP2Q8WZ74 1663 aa13.77□□□□□ -0.21
CDH23-213ENST00000619887 HECW1Q76N89 1606 aa13.75□□□□□ -0.21
CDH23-213ENST00000619887 UACAQ9BZF9 1416 aa13.75□□□□□ -0.21
CDH23-213ENST00000619887 HIRIP3Q9BW71 556 aaPredicted RBP13.75□□□□□ -0.21
CDH23-213ENST00000619887 CFAP43Q8NDM7 1665 aa13.74□□□□□ -0.21
CDH23-213ENST00000619887 SUPT6HQ7KZ85 1726 aaKnown RBP13.74□□□□□ -0.21
CDH23-213ENST00000619887 IQGAP2Q13576 1575 aa13.72□□□□□ -0.21
CDH23-213ENST00000619887 THOC2Q8NI27 1593 aaKnown RBP13.72□□□□□ -0.21
CDH23-213ENST00000619887 HFM1A2PYH4 1435 aa13.71□□□□□ -0.22
CDH23-213ENST00000619887 CCER2I3L3R5 266 aa13.7□□□□□ -0.22
CDH23-213ENST00000619887 MPHOSPH9Q99550 1183 aa13.69□□□□□ -0.22
CDH23-213ENST00000619887 MIA2Q96PC5 1412 aa13.69□□□□□ -0.22
CDH23-213ENST00000619887 JPH4Q96JJ6 628 aa13.68□□□□□ -0.22
CDH23-213ENST00000619887 KIAA0586Q9BVV6 1533 aa13.67□□□□□ -0.22
CDH23-213ENST00000619887 DNAJC5BQ9UF47 199 aa13.67□□□□□ -0.22
CDH23-213ENST00000619887 ABCA5Q8WWZ7 1642 aa13.66□□□□□ -0.22
CDH23-213ENST00000619887 ANKRD30AQ9BXX3 1397 aa13.65□□□□□ -0.22
CDH23-213ENST00000619887 EPRSP07814 1512 aaKnown RBP13.65□□□□□ -0.22
CDH23-213ENST00000619887 SNAPC4Q5SXM2 1469 aa13.65□□□□□ -0.23
CDH23-213ENST00000619887 HNRNPUQ00839 825 aaKnown RBP eCLIP13.64□□□□□ -0.23
CDH23-213ENST00000619887 BCANQ96GW7 911 aa13.63□□□□□ -0.23
CDH23-213ENST00000619887 KIF21AQ7Z4S6 1674 aa13.63□□□□□ -0.23
CDH23-213ENST00000619887 FKBP8Q14318 412 aa13.62□□□□□ -0.23
CDH23-213ENST00000619887 PTPN23Q9H3S7 1636 aa13.61□□□□□ -0.23
CDH23-213ENST00000619887 NAIPQ13075 1403 aa13.61□□□□□ -0.23
CDH23-213ENST00000619887 HSPA5P11021 654 aaKnown RBP13.6□□□□□ -0.23
CDH23-213ENST00000619887 ADAMTS12P58397 1594 aa13.59□□□□□ -0.23
CDH23-213ENST00000619887 SAMD9Q5K651 1589 aa13.59□□□□□ -0.23
CDH23-213ENST00000619887 MAGI1Q96QZ7 1491 aaPredicted RBP13.59□□□□□ -0.23
CDH23-213ENST00000619887 GRIN2AQ12879 1464 aa13.58□□□□□ -0.24
CDH23-213ENST00000619887 MAPKBP1O60336 1514 aa13.58□□□□□ -0.24
CDH23-213ENST00000619887 MRS2Q9HD23 443 aa13.57□□□□□ -0.24
CDH23-213ENST00000619887 CDK13Q14004 1512 aaKnown RBP13.57□□□□□ -0.24
CDH23-213ENST00000619887 L3MBTL2Q969R5 705 aa13.57□□□□□ -0.24
CDH23-213ENST00000619887 TROQ12816 1431 aaPredicted RBP13.57□□□□□ -0.24
CDH23-213ENST00000619887 RSPH4AQ5TD94 716 aa13.56□□□□□ -0.24
CDH23-213ENST00000619887 UGGT2Q9NYU1 1516 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms