RNA–Protein interactions for RNA: ENST00000619887.4

CDH23-213, Transcript of cadherin related 23, humanhuman

TSL 1 (best) BASIC

Gene CDH23, Length 4,224 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-213ENST00000619887 NISCHQ9Y2I1 1504 aa19.84■□□□□ 0.77
CDH23-213ENST00000619887 DCAF8L2P0C7V8 631 aa17.48■□□□□ 0.39
CDH23-213ENST00000619887 SHROOM4Q9ULL8 1493 aa17.17■□□□□ 0.34
CDH23-213ENST00000619887 SUPT5HO00267 1087 aaKnown RBP17■□□□□ 0.31
CDH23-213ENST00000619887 CCDC180Q9P1Z9 1646 aa16.87■□□□□ 0.29
CDH23-213ENST00000619887 ZCCHC6Q5VYS8 1495 aaKnown RBP16.68■□□□□ 0.26
CDH23-213ENST00000619887 DCAF1Q9Y4B6 1507 aa16.23■□□□□ 0.19
CDH23-213ENST00000619887 CHIC1Q5VXU3 224 aa16.14■□□□□ 0.17
CDH23-213ENST00000619887 ABCC9O60706 1549 aa16.04■□□□□ 0.16
CDH23-213ENST00000619887 EHMT2Q96KQ7 1210 aa15.99■□□□□ 0.15
CDH23-213ENST00000619887 TRIM41Q8WV44 630 aa15.92■□□□□ 0.14
CDH23-213ENST00000619887 SCRIBQ14160 1630 aa15.91■□□□□ 0.14
CDH23-213ENST00000619887 MYO15BQ96JP2 1530 aa15.83■□□□□ 0.12
CDH23-213ENST00000619887 NACADO15069 1562 aa15.83■□□□□ 0.12
CDH23-213ENST00000619887 PCGF6Q9BYE7 350 aa15.77■□□□□ 0.12
CDH23-213ENST00000619887 FAM9AQ8IZU1 332 aaPredicted RBP15.76■□□□□ 0.11
CDH23-213ENST00000619887 RB1CC1Q8TDY2 1594 aa15.67■□□□□ 0.1
CDH23-213ENST00000619887 RSF1Q96T23 1441 aaPredicted RBP15.66■□□□□ 0.1
CDH23-213ENST00000619887 LOC105371045A0A1W2PR82 267 aa15.65■□□□□ 0.1
CDH23-213ENST00000619887 TRIM26Q12899 539 aaPredicted RBP15.54■□□□□ 0.08
CDH23-213ENST00000619887 HRCP23327 699 aa15.54■□□□□ 0.08
CDH23-213ENST00000619887 ZEB1P37275 1124 aaPredicted RBP15.47■□□□□ 0.07
CDH23-213ENST00000619887 PABPN1Q86U42 306 aaKnown RBP eCLIP15.41■□□□□ 0.06
CDH23-213ENST00000619887 BAZ1AQ9NRL2 1556 aaPredicted RBP15.4■□□□□ 0.06
CDH23-213ENST00000619887 CECR2Q9BXF3 1484 aa15.39■□□□□ 0.05
CDH23-213ENST00000619887 TTBK1Q5TCY1 1321 aaPredicted RBP15.37■□□□□ 0.05
CDH23-213ENST00000619887 UBTFP17480 764 aaKnown RBP15.33■□□□□ 0.05
CDH23-213ENST00000619887 MROH2BQ7Z745 1585 aa15.33■□□□□ 0.04
CDH23-213ENST00000619887 APLP2Q06481 763 aa15.31■□□□□ 0.04
CDH23-213ENST00000619887 RANGAP1P46060 587 aaPredicted RBP15.27■□□□□ 0.04
CDH23-213ENST00000619887 WIZO95785 1651 aa15.19■□□□□ 0.02
CDH23-213ENST00000619887 CCER1Q8TC90 406 aaPredicted RBP15.14■□□□□ 0.01
CDH23-213ENST00000619887 TOP2AP11388 1531 aaKnown RBP15.13■□□□□ 0.01
CDH23-213ENST00000619887 PPARGC1BQ86YN6 1023 aaKnown RBP15.13■□□□□ 0.01
CDH23-213ENST00000619887 CSRNP3Q8WYN3 585 aa15.11■□□□□ 0.01
CDH23-213ENST00000619887 SMARCA4P51532 1647 aa15.09■□□□□ 0.01
CDH23-213ENST00000619887 EEA1Q15075 1411 aa15.09■□□□□ 0.01
CDH23-213ENST00000619887 CCDC88BA6NC98 1476 aa15.05■□□□□ -0
CDH23-213ENST00000619887 BAZ1BQ9UIG0 1483 aaKnown RBP15.01□□□□□ -0.01
CDH23-213ENST00000619887 WRNQ14191 1432 aaPredicted RBP eCLIP14.97□□□□□ -0.01
CDH23-213ENST00000619887 ATP1B4Q9UN42 357 aaPredicted RBP14.97□□□□□ -0.01
CDH23-213ENST00000619887 SMARCA2P51531 1590 aa14.95□□□□□ -0.02
CDH23-213ENST00000619887 GOLGA3Q08378 1498 aa14.9□□□□□ -0.02
CDH23-213ENST00000619887 ABCC8Q09428 1581 aa14.9□□□□□ -0.02
CDH23-213ENST00000619887 TNIKQ9UKE5 1360 aa14.9□□□□□ -0.02
CDH23-213ENST00000619887 CEP162Q5TB80 1403 aa14.87□□□□□ -0.03
CDH23-213ENST00000619887 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.85□□□□□ -0.03
CDH23-213ENST00000619887 ATAD2BQ9ULI0 1458 aa14.84□□□□□ -0.03
CDH23-213ENST00000619887 CEP164Q9UPV0 1460 aa14.82□□□□□ -0.04
CDH23-213ENST00000619887 SOGA1O94964 1423 aa14.81□□□□□ -0.04
CDH23-213ENST00000619887 HNRNPUL2Q1KMD3 747 aaKnown RBP14.77□□□□□ -0.04
CDH23-213ENST00000619887 UNC13AQ9UPW8 1703 aa14.77□□□□□ -0.05
CDH23-213ENST00000619887 CLIP1P30622 1438 aa14.76□□□□□ -0.05
CDH23-213ENST00000619887 BICRAQ9NZM4 1560 aa14.74□□□□□ -0.05
CDH23-213ENST00000619887 CENPBP07199 599 aaPredicted RBP14.73□□□□□ -0.05
CDH23-213ENST00000619887 PEG3Q9GZU2 1588 aa14.66□□□□□ -0.06
CDH23-213ENST00000619887 KIF27Q86VH2 1401 aa14.66□□□□□ -0.06
CDH23-213ENST00000619887 EIF4G1Q04637 1599 aaKnown RBP14.61□□□□□ -0.07
CDH23-213ENST00000619887 NCAPD3P42695 1498 aa14.59□□□□□ -0.07
CDH23-213ENST00000619887 DIEXFQ68CQ4 756 aaKnown RBP14.59□□□□□ -0.07
CDH23-213ENST00000619887 RUSC2Q8N2Y8 1516 aa14.59□□□□□ -0.07
CDH23-213ENST00000619887 VPS8Q8N3P4 1428 aa14.56□□□□□ -0.08
CDH23-213ENST00000619887 ITGAEP38570 1179 aa14.55□□□□□ -0.08
CDH23-213ENST00000619887 HMGXB3Q12766 1538 aa14.54□□□□□ -0.08
CDH23-213ENST00000619887 SYNJ1O43426 1573 aa14.51□□□□□ -0.09
CDH23-213ENST00000619887 KIF21BO75037 1637 aa14.51□□□□□ -0.09
CDH23-213ENST00000619887 ZNF316A6NFI3 1004 aaPredicted RBP14.5□□□□□ -0.09
CDH23-213ENST00000619887 PELP1Q8IZL8 1130 aaKnown RBP14.49□□□□□ -0.09
CDH23-213ENST00000619887 RAPGEF2Q9Y4G8 1499 aa14.48□□□□□ -0.09
CDH23-213ENST00000619887 CADPSQ9ULU8 1353 aa14.47□□□□□ -0.09
CDH23-213ENST00000619887 CUX2O14529 1486 aa14.46□□□□□ -0.1
CDH23-213ENST00000619887 TOP2BQ02880 1626 aa14.44□□□□□ -0.1
CDH23-213ENST00000619887 FAM50AQ14320 339 aaKnown RBP14.43□□□□□ -0.1
CDH23-213ENST00000619887 CFTRP13569 1480 aa14.4□□□□□ -0.1
CDH23-213ENST00000619887 CARMIL1Q5VZK9 1371 aa14.4□□□□□ -0.1
CDH23-213ENST00000619887 P3H3Q8IVL6 736 aa14.39□□□□□ -0.11
CDH23-213ENST00000619887 ERICH3Q5RHP9 1530 aa14.38□□□□□ -0.11
CDH23-213ENST00000619887 YTHDC1Q96MU7 727 aaKnown RBP14.37□□□□□ -0.11
CDH23-213ENST00000619887 FHAD1B1AJZ9 1412 aa14.34□□□□□ -0.11
CDH23-213ENST00000619887 CLSPNQ9HAW4 1339 aa14.34□□□□□ -0.11
CDH23-213ENST00000619887 MYT1Q01538 1121 aa14.31□□□□□ -0.12
CDH23-213ENST00000619887 PRXQ9BXM0 1461 aa14.3□□□□□ -0.12
CDH23-213ENST00000619887 CUX1P39880 1505 aa14.3□□□□□ -0.12
CDH23-213ENST00000619887 BIVM-ERCC5R4GMW8 1640 aa14.29□□□□□ -0.12
CDH23-213ENST00000619887 FANCD2Q9BXW9 1451 aa14.29□□□□□ -0.12
CDH23-213ENST00000619887 CCNB3Q8WWL7 1395 aa14.27□□□□□ -0.12
CDH23-213ENST00000619887 ACIN1Q9UKV3 1341 aaKnown RBP14.26□□□□□ -0.13
CDH23-213ENST00000619887 PDS5BQ9NTI5 1447 aa14.26□□□□□ -0.13
CDH23-213ENST00000619887 MYT1LQ9UL68 1186 aa14.26□□□□□ -0.13
CDH23-213ENST00000619887 FGD5Q6ZNL6 1462 aa14.26□□□□□ -0.13
CDH23-213ENST00000619887 IGF1RP08069 1367 aa14.23□□□□□ -0.13
CDH23-213ENST00000619887 MTUS2Q5JR59 1369 aa14.23□□□□□ -0.13
CDH23-213ENST00000619887 KANK4Q5T7N3 995 aaPredicted RBP14.23□□□□□ -0.13
CDH23-213ENST00000619887 CC2D2AQ9P2K1 1620 aa14.21□□□□□ -0.13
CDH23-213ENST00000619887 NEUROD1Q13562 356 aa14.2□□□□□ -0.14
CDH23-213ENST00000619887 POLR3GLQ9BT43 218 aa14.17□□□□□ -0.14
CDH23-213ENST00000619887 CNGB1Q14028 1251 aaPredicted RBP14.17□□□□□ -0.14
CDH23-213ENST00000619887 ARAP1Q96P48 1450 aa14.16□□□□□ -0.14
CDH23-213ENST00000619887 FMN1Q68DA7 1419 aa14.15□□□□□ -0.14
CDH23-213ENST00000619887 FBLN2P98095 1184 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms