RNA–Protein interactions for RNA: ENST00000618450.1

CHD7-212, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

Gene CHD7, Length 4,222 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-212ENST00000618450 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.67□□□□□ -0.54
CHD7-212ENST00000618450 CTTNBP2Q8WZ74 1663 aa11.67□□□□□ -0.54
CHD7-212ENST00000618450 AQRO60306 1485 aaKnown RBP eCLIP11.66□□□□□ -0.546e-11■■■■□ 25.1
CHD7-212ENST00000618450 FGD5Q6ZNL6 1462 aa11.66□□□□□ -0.54
CHD7-212ENST00000618450 MYT1Q01538 1121 aa11.65□□□□□ -0.54
CHD7-212ENST00000618450 SNAPC4Q5SXM2 1469 aa11.64□□□□□ -0.55
CHD7-212ENST00000618450 CC2D2AQ9P2K1 1620 aa11.64□□□□□ -0.55
CHD7-212ENST00000618450 SAMD9Q5K651 1589 aa11.63□□□□□ -0.55
CHD7-212ENST00000618450 SETD5Q9C0A6 1442 aa11.62□□□□□ -0.55
CHD7-212ENST00000618450 ABCA10Q8WWZ4 1543 aa11.62□□□□□ -0.55
CHD7-212ENST00000618450 FYCO1Q9BQS8 1478 aa11.61□□□□□ -0.55
CHD7-212ENST00000618450 KCNH8Q96L42 1107 aa11.61□□□□□ -0.55
CHD7-212ENST00000618450 EFCAB5A4FU69 1503 aa11.61□□□□□ -0.55
CHD7-212ENST00000618450 CADPSQ9ULU8 1353 aa11.61□□□□□ -0.55
CHD7-212ENST00000618450 PPP1R15AO75807 674 aaPredicted RBP11.61□□□□□ -0.55
CHD7-212ENST00000618450 CUL7Q14999 1698 aa11.6□□□□□ -0.55
CHD7-212ENST00000618450 ARHGEF11O15085 1522 aa11.6□□□□□ -0.55
CHD7-212ENST00000618450 DNMBPQ6XZF7 1577 aa11.59□□□□□ -0.55
CHD7-212ENST00000618450 DENND4BO75064 1496 aaPredicted RBP11.59□□□□□ -0.55
CHD7-212ENST00000618450 CARMIL1Q5VZK9 1371 aa11.59□□□□□ -0.55
CHD7-212ENST00000618450 APLP2Q06481 763 aa11.58□□□□□ -0.56
CHD7-212ENST00000618450 CASKIN1Q8WXD9 1431 aa11.58□□□□□ -0.56
CHD7-212ENST00000618450 ABCA5Q8WWZ7 1642 aa11.57□□□□□ -0.56
CHD7-212ENST00000618450 PTPRKQ15262 1439 aa11.57□□□□□ -0.56
CHD7-212ENST00000618450 TSHZ2Q9NRE2 1034 aa11.56□□□□□ -0.56
CHD7-212ENST00000618450 PTPN23Q9H3S7 1636 aa11.55□□□□□ -0.56
CHD7-212ENST00000618450 FHAD1B1AJZ9 1412 aa11.55□□□□□ -0.56
CHD7-212ENST00000618450 POLA1P09884 1462 aaPredicted RBP11.54□□□□□ -0.56
CHD7-212ENST00000618450 TIMELESSQ9UNS1 1208 aa11.53□□□□□ -0.56
CHD7-212ENST00000618450 RANGAP1P46060 587 aaPredicted RBP11.52□□□□□ -0.56
CHD7-212ENST00000618450 THOC2Q8NI27 1593 aaKnown RBP11.52□□□□□ -0.56
CHD7-212ENST00000618450 TOPBP1Q92547 1522 aa11.52□□□□□ -0.56
CHD7-212ENST00000618450 GRIN2BQ13224 1484 aa11.52□□□□□ -0.57
CHD7-212ENST00000618450 KIF21AQ7Z4S6 1674 aa11.52□□□□□ -0.57
CHD7-212ENST00000618450 GCC2Q8IWJ2 1684 aa11.51□□□□□ -0.57
CHD7-212ENST00000618450 HFM1A2PYH4 1435 aa11.51□□□□□ -0.57
CHD7-212ENST00000618450 MAGI3Q5TCQ9 1506 aa11.51□□□□□ -0.57
CHD7-212ENST00000618450 FANCD2Q9BXW9 1451 aa11.5□□□□□ -0.57
CHD7-212ENST00000618450 RAD54L2Q9Y4B4 1467 aa11.49□□□□□ -0.57
CHD7-212ENST00000618450 FGD6Q6ZV73 1430 aa11.49□□□□□ -0.57
CHD7-212ENST00000618450 FHOD3Q2V2M9 1422 aa11.48□□□□□ -0.57
CHD7-212ENST00000618450 HECW1Q76N89 1606 aa11.48□□□□□ -0.57
CHD7-212ENST00000618450 UGGT2Q9NYU1 1516 aa11.47□□□□□ -0.57
CHD7-212ENST00000618450 SIN3AQ96ST3 1273 aa11.47□□□□□ -0.57
CHD7-212ENST00000618450 KDM6BO15054 1643 aa11.47□□□□□ -0.57
CHD7-212ENST00000618450 POLR1AO95602 1720 aaPredicted RBP11.47□□□□□ -0.57
CHD7-212ENST00000618450 NAIPQ13075 1403 aa11.46□□□□□ -0.57
CHD7-212ENST00000618450 TCOF1Q13428 1488 aaKnown RBP11.46□□□□□ -0.57
CHD7-212ENST00000618450 UACAQ9BZF9 1416 aa11.45□□□□□ -0.58
CHD7-212ENST00000618450 URB2Q14146 1524 aaKnown RBP11.45□□□□□ -0.58
CHD7-212ENST00000618450 TARBP1Q13395 1621 aaKnown RBP11.44□□□□□ -0.58
CHD7-212ENST00000618450 CCDC18Q5T9S5 1454 aa11.43□□□□□ -0.58
CHD7-212ENST00000618450 SUPT6HQ7KZ85 1726 aaKnown RBP11.43□□□□□ -0.58
CHD7-212ENST00000618450 NCOA2Q15596 1464 aa11.43□□□□□ -0.58
CHD7-212ENST00000618450 CCER2I3L3R5 266 aa11.42□□□□□ -0.58
CHD7-212ENST00000618450 LAMC3Q9Y6N6 1575 aa11.42□□□□□ -0.58
CHD7-212ENST00000618450 NESP48681 1621 aa11.4□□□□□ -0.58
CHD7-212ENST00000618450 AKNAQ7Z591 1439 aa11.4□□□□□ -0.58
CHD7-212ENST00000618450 EHBP1L1Q8N3D4 1523 aa11.4□□□□□ -0.59
CHD7-212ENST00000618450 FMN1Q68DA7 1419 aa11.39□□□□□ -0.59
CHD7-212ENST00000618450 MYOM3Q5VTT5 1437 aa11.39□□□□□ -0.59
CHD7-212ENST00000618450 PBRM1Q86U86 1689 aa11.36□□□□□ -0.59
CHD7-212ENST00000618450 DDX10Q13206 875 aaKnown RBP11.36□□□□□ -0.59
CHD7-212ENST00000618450 ITGAEP38570 1179 aa11.33□□□□□ -0.59
CHD7-212ENST00000618450 ANP32EQ9BTT0 268 aa11.33□□□□□ -0.6
CHD7-212ENST00000618450 SPATA31E1Q6ZUB1 1445 aa11.33□□□□□ -0.6
CHD7-212ENST00000618450 WDR62O43379 1518 aa11.32□□□□□ -0.6
CHD7-212ENST00000618450 TEX14Q8IWB6 1497 aa11.31□□□□□ -0.6
CHD7-212ENST00000618450 GAPVD1Q14C86 1478 aa11.29□□□□□ -0.6
CHD7-212ENST00000618450 WASHC2AQ641Q2 1341 aa11.29□□□□□ -0.6
CHD7-212ENST00000618450 ADAMTS12P58397 1594 aa11.29□□□□□ -0.6
CHD7-212ENST00000618450 DNMT1P26358 1616 aaKnown RBP11.28□□□□□ -0.6
CHD7-212ENST00000618450 NCOA1Q15788 1441 aa11.28□□□□□ -0.6
CHD7-212ENST00000618450 MBD5Q9P267 1494 aa11.28□□□□□ -0.6
CHD7-212ENST00000618450 FAM50AQ14320 339 aaKnown RBP11.27□□□□□ -0.61
CHD7-212ENST00000618450 EPRSP07814 1512 aaKnown RBP11.27□□□□□ -0.61
CHD7-212ENST00000618450 HIRIP3Q9BW71 556 aaPredicted RBP11.27□□□□□ -0.61
CHD7-212ENST00000618450 MSH5O43196 834 aa11.27□□□□□ -0.61
CHD7-212ENST00000618450 FKBP8Q14318 412 aa11.26□□□□□ -0.61
CHD7-212ENST00000618450 P3H3Q8IVL6 736 aa11.26□□□□□ -0.61
CHD7-212ENST00000618450 MIA2Q96PC5 1412 aa11.26□□□□□ -0.61
CHD7-212ENST00000618450 RBM19Q9Y4C8 960 aaKnown RBP11.26□□□□□ -0.61
CHD7-212ENST00000618450 CROCC2H7BZ55 1655 aa11.25□□□□□ -0.61
CHD7-212ENST00000618450 BCORL1Q5H9F3 1711 aa11.25□□□□□ -0.61
CHD7-212ENST00000618450 IQGAP2Q13576 1575 aa11.25□□□□□ -0.61
CHD7-212ENST00000618450 RPRD2Q5VT52 1461 aaKnown RBP11.25□□□□□ -0.61
CHD7-212ENST00000618450 C11orf95C9JLR9 678 aaPredicted RBP11.23□□□□□ -0.61
CHD7-212ENST00000618450 CNTLNQ9NXG0 1405 aa11.22□□□□□ -0.61
CHD7-212ENST00000618450 ADCY10Q96PN6 1610 aa11.22□□□□□ -0.61
CHD7-212ENST00000618450 ANKRD30BQ9BXX2 1392 aa11.22□□□□□ -0.61
CHD7-212ENST00000618450 ROCK1Q13464 1354 aa11.22□□□□□ -0.61
CHD7-212ENST00000618450 CDK13Q14004 1512 aaKnown RBP11.21□□□□□ -0.61
CHD7-212ENST00000618450 DISP1Q96F81 1524 aa11.21□□□□□ -0.61
CHD7-212ENST00000618450 MTUS2Q5JR59 1369 aa11.21□□□□□ -0.62
CHD7-212ENST00000618450 CCDC184Q52MB2 194 aa11.2□□□□□ -0.62
CHD7-212ENST00000618450 TDRD9Q8NDG6 1382 aaKnown RBP11.2□□□□□ -0.62
CHD7-212ENST00000618450 TONSLQ96HA7 1378 aa11.2□□□□□ -0.62
CHD7-212ENST00000618450 TRIM52Q96A61 297 aa11.2□□□□□ -0.62
CHD7-212ENST00000618450 ADGBQ8N7X0 1667 aa11.2□□□□□ -0.62
CHD7-212ENST00000618450 E9PCH4 1651 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms