RNA–Protein interactions for RNA: ENST00000616995.4

PRKD1-209, Transcript of protein kinase D1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PRKD1, Length 3,498 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD1-209ENST00000616995 ARHGAP35Q9NRY4 1499 aa20.88■□□□□ 0.93
PRKD1-209ENST00000616995 CNGB1Q14028 1251 aaPredicted RBP20.87■□□□□ 0.93
PRKD1-209ENST00000616995 TRIM52Q96A61 297 aa20.87■□□□□ 0.93
PRKD1-209ENST00000616995 DDX10Q13206 875 aaKnown RBP20.87■□□□□ 0.93
PRKD1-209ENST00000616995 PELP1Q8IZL8 1130 aaKnown RBP20.86■□□□□ 0.93
PRKD1-209ENST00000616995 CC2D2AQ9P2K1 1620 aa20.83■□□□□ 0.92
PRKD1-209ENST00000616995 RAB3GAP2Q9H2M9 1393 aa20.82■□□□□ 0.92
PRKD1-209ENST00000616995 MTUS2Q5JR59 1369 aa20.81■□□□□ 0.92
PRKD1-209ENST00000616995 RRP7BPQ9NSQ0 103 aa20.79■□□□□ 0.92
PRKD1-209ENST00000616995 ERICH3Q5RHP9 1530 aa20.78■□□□□ 0.92
PRKD1-209ENST00000616995 BIVM-ERCC5R4GMW8 1640 aa20.76■□□□□ 0.91
PRKD1-209ENST00000616995 PHLDB1Q86UU1 1377 aa20.74■□□□□ 0.91
PRKD1-209ENST00000616995 BCANQ96GW7 911 aa20.72■□□□□ 0.91
PRKD1-209ENST00000616995 KCNH8Q96L42 1107 aa20.71■□□□□ 0.91
PRKD1-209ENST00000616995 POLR3GLQ9BT43 218 aa20.69■□□□□ 0.9
PRKD1-209ENST00000616995 ZNF777Q9ULD5 760 aaPredicted RBP20.67■□□□□ 0.9
PRKD1-209ENST00000616995 FHAD1B1AJZ9 1412 aa20.67■□□□□ 0.9
PRKD1-209ENST00000616995 SETD5Q9C0A6 1442 aa20.65■□□□□ 0.9
PRKD1-209ENST00000616995 POLA1P09884 1462 aaPredicted RBP20.63■□□□□ 0.89
PRKD1-209ENST00000616995 CLSPNQ9HAW4 1339 aa20.62■□□□□ 0.89
PRKD1-209ENST00000616995 TONSLQ96HA7 1378 aa20.6■□□□□ 0.89
PRKD1-209ENST00000616995 RRBP1Q9P2E9 1410 aaKnown RBP20.6■□□□□ 0.89
PRKD1-209ENST00000616995 TOPBP1Q92547 1522 aa20.59■□□□□ 0.89
PRKD1-209ENST00000616995 ZNF326Q5BKZ1 582 aaKnown RBP20.59■□□□□ 0.89
PRKD1-209ENST00000616995 FOXD1Q16676 465 aa20.58■□□□□ 0.89
PRKD1-209ENST00000616995 LRRC9Q6ZRR7 1453 aa20.57■□□□□ 0.88
PRKD1-209ENST00000616995 PDS5BQ9NTI5 1447 aa20.53■□□□□ 0.88
PRKD1-209ENST00000616995 ANP32CO43423 234 aa20.52■□□□□ 0.88
PRKD1-209ENST00000616995 AQRO60306 1485 aaKnown RBP eCLIP20.51■□□□□ 0.87
PRKD1-209ENST00000616995 CHMP7Q8WUX9 453 aaPredicted RBP20.5■□□□□ 0.87
PRKD1-209ENST00000616995 GAPVD1Q14C86 1478 aa20.49■□□□□ 0.87
PRKD1-209ENST00000616995 TIAM1Q13009 1591 aa20.47■□□□□ 0.87
PRKD1-209ENST00000616995 FMN1Q68DA7 1419 aa20.45■□□□□ 0.86
PRKD1-209ENST00000616995 URB2Q14146 1524 aaKnown RBP20.42■□□□□ 0.86
PRKD1-209ENST00000616995 PCF11O94913 1555 aaKnown RBP20.42■□□□□ 0.86
PRKD1-209ENST00000616995 PPP1R15AO75807 674 aaPredicted RBP20.41■□□□□ 0.86
PRKD1-209ENST00000616995 DNMBPQ6XZF7 1577 aa20.41■□□□□ 0.86
PRKD1-209ENST00000616995 SENP3-EIF4A1A0A087X0R7 540 aa20.41■□□□□ 0.86
PRKD1-209ENST00000616995 NEFLP07196 543 aa20.41■□□□□ 0.86
PRKD1-209ENST00000616995 ABCA10Q8WWZ4 1543 aa20.39■□□□□ 0.86
PRKD1-209ENST00000616995 FKBP8Q14318 412 aa20.38■□□□□ 0.85
PRKD1-209ENST00000616995 ZNF644Q9H582 1327 aaPredicted RBP20.36■□□□□ 0.85
PRKD1-209ENST00000616995 CASKIN1Q8WXD9 1431 aa20.35■□□□□ 0.85
PRKD1-209ENST00000616995 FGD6Q6ZV73 1430 aa20.35■□□□□ 0.85
PRKD1-209ENST00000616995 SLC4A1APQ9BWU0 796 aaKnown RBP20.34■□□□□ 0.85
PRKD1-209ENST00000616995 CDK11AQ9UQ88 783 aaPredicted RBP20.33■□□□□ 0.85
PRKD1-209ENST00000616995 SUPT16HQ9Y5B9 1047 aaKnown RBP20.32■□□□□ 0.84
PRKD1-209ENST00000616995 IRX6P78412 446 aaPredicted RBP20.3■□□□□ 0.84
PRKD1-209ENST00000616995 ERCC6Q03468 1493 aa20.3■□□□□ 0.84
PRKD1-209ENST00000616995 HNRNPUQ00839 825 aaKnown RBP eCLIP20.29■□□□□ 0.84
PRKD1-209ENST00000616995 CFDP1Q9UEE9 299 aaPredicted RBP20.29■□□□□ 0.84
PRKD1-209ENST00000616995 WDR97A6NE52 1622 aa20.28■□□□□ 0.84
PRKD1-209ENST00000616995 CCDC18Q5T9S5 1454 aa20.27■□□□□ 0.84
PRKD1-209ENST00000616995 NCOA2Q15596 1464 aa20.27■□□□□ 0.84
PRKD1-209ENST00000616995 FYCO1Q9BQS8 1478 aa20.27■□□□□ 0.84
PRKD1-209ENST00000616995 FAM9BQ8IZU0 186 aa20.26■□□□□ 0.83
PRKD1-209ENST00000616995 MPHOSPH9Q99550 1183 aa20.25■□□□□ 0.83
PRKD1-209ENST00000616995 KDM2AQ9Y2K7 1162 aa20.25■□□□□ 0.83
PRKD1-209ENST00000616995 MAPKBP1O60336 1514 aa20.23■□□□□ 0.83
PRKD1-209ENST00000616995 PTPRKQ15262 1439 aa20.23■□□□□ 0.83
PRKD1-209ENST00000616995 HSPA5P11021 654 aaKnown RBP20.23■□□□□ 0.83
PRKD1-209ENST00000616995 L3MBTL2Q969R5 705 aa20.22■□□□□ 0.83
PRKD1-209ENST00000616995 EIF4G2P78344 907 aaKnown RBP eCLIP20.21■□□□□ 0.83
PRKD1-209ENST00000616995 MYOM3Q5VTT5 1437 aa20.21■□□□□ 0.83
PRKD1-209ENST00000616995 MYT1LQ9UL68 1186 aa20.19■□□□□ 0.82
PRKD1-209ENST00000616995 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.19■□□□□ 0.82
PRKD1-209ENST00000616995 CDK13Q14004 1512 aaKnown RBP20.17■□□□□ 0.82
PRKD1-209ENST00000616995 ZNF608Q9ULD9 1512 aaPredicted RBP20.17■□□□□ 0.82
PRKD1-209ENST00000616995 LAMC3Q9Y6N6 1575 aa20.16■□□□□ 0.82
PRKD1-209ENST00000616995 EFCAB5A4FU69 1503 aa20.15■□□□□ 0.82
PRKD1-209ENST00000616995 PLEKHD1A6NEE1 506 aa20.15■□□□□ 0.82
PRKD1-209ENST00000616995 PRDM2Q13029 1718 aa20.15■□□□□ 0.82
PRKD1-209ENST00000616995 TIMELESSQ9UNS1 1208 aa20.15■□□□□ 0.82
PRKD1-209ENST00000616995 JPH4Q96JJ6 628 aa20.13■□□□□ 0.81
PRKD1-209ENST00000616995 MAP3K1Q13233 1512 aa20.11■□□□□ 0.81
PRKD1-209ENST00000616995 NAIPQ13075 1403 aa20.1■□□□□ 0.81
PRKD1-209ENST00000616995 CUL7Q14999 1698 aa20.09■□□□□ 0.81
PRKD1-209ENST00000616995 MRS2Q9HD23 443 aa20.09■□□□□ 0.81
PRKD1-209ENST00000616995 TSPY4P0CV99 314 aa20.09■□□□□ 0.81
PRKD1-209ENST00000616995 TSPY10P0CW01 314 aa20.09■□□□□ 0.81
PRKD1-209ENST00000616995 RGL3Q3MIN7 710 aa20.09■□□□□ 0.81
PRKD1-209ENST00000616995 UACAQ9BZF9 1416 aa20.09■□□□□ 0.81
PRKD1-209ENST00000616995 PKD2Q13563 968 aa20.07■□□□□ 0.8
PRKD1-209ENST00000616995 KIF21AQ7Z4S6 1674 aa20.06■□□□□ 0.8
PRKD1-209ENST00000616995 SNAPC4Q5SXM2 1469 aa20.06■□□□□ 0.8
PRKD1-209ENST00000616995 HFM1A2PYH4 1435 aa20.05■□□□□ 0.8
PRKD1-209ENST00000616995 HNRNPMP52272 730 aaKnown RBP eCLIP20.05■□□□□ 0.8
PRKD1-209ENST00000616995 GRIN2BQ13224 1484 aa20.05■□□□□ 0.8
PRKD1-209ENST00000616995 SALL2Q9Y467 1007 aaPredicted RBP20.05■□□□□ 0.8
PRKD1-209ENST00000616995 MRC2Q9UBG0 1479 aa20.03■□□□□ 0.8
PRKD1-209ENST00000616995 PRG4Q92954 1404 aaPredicted RBP20.02■□□□□ 0.79
PRKD1-209ENST00000616995 EPRSP07814 1512 aaKnown RBP20.01■□□□□ 0.79
PRKD1-209ENST00000616995 CTTNBP2Q8WZ74 1663 aa20■□□□□ 0.79
PRKD1-209ENST00000616995 WASHC2AQ641Q2 1341 aa19.99■□□□□ 0.79
PRKD1-209ENST00000616995 NBPF8Q3BBV2 869 aa19.99■□□□□ 0.79
PRKD1-209ENST00000616995 CFAP43Q8NDM7 1665 aa19.98■□□□□ 0.79
PRKD1-209ENST00000616995 CCDC184Q52MB2 194 aa19.97■□□□□ 0.79
PRKD1-209ENST00000616995 C11orf95C9JLR9 678 aaPredicted RBP19.96■□□□□ 0.79
PRKD1-209ENST00000616995 IQGAP2Q13576 1575 aa19.96■□□□□ 0.79
PRKD1-209ENST00000616995 CCER2I3L3R5 266 aa19.96■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms