RNA–Protein interactions for RNA: ENST00000615665.4

SSBP2-220, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 5 BASIC

Gene SSBP2, Length 4,465 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-220ENST00000615665 ZNF777Q9ULD5 760 aaPredicted RBP19.67■□□□□ 0.74
SSBP2-220ENST00000615665 FANCD2Q9BXW9 1451 aa19.66■□□□□ 0.74
SSBP2-220ENST00000615665 ERICH3Q5RHP9 1530 aa19.65■□□□□ 0.74
SSBP2-220ENST00000615665 IGF1RP08069 1367 aa19.64■□□□□ 0.73
SSBP2-220ENST00000615665 ZNF326Q5BKZ1 582 aaKnown RBP19.63■□□□□ 0.73
SSBP2-220ENST00000615665 FGD5Q6ZNL6 1462 aa19.63■□□□□ 0.73
SSBP2-220ENST00000615665 PDS5BQ9NTI5 1447 aa19.62■□□□□ 0.73
SSBP2-220ENST00000615665 TDRD9Q8NDG6 1382 aaKnown RBP19.61■□□□□ 0.73
SSBP2-220ENST00000615665 MYT1LQ9UL68 1186 aa19.61■□□□□ 0.73
SSBP2-220ENST00000615665 SETD5Q9C0A6 1442 aa19.61■□□□□ 0.73
SSBP2-220ENST00000615665 RRP7BPQ9NSQ0 103 aa19.6■□□□□ 0.73
SSBP2-220ENST00000615665 PRXQ9BXM0 1461 aa19.6■□□□□ 0.73
SSBP2-220ENST00000615665 SIN3AQ96ST3 1273 aa19.59■□□□□ 0.73
SSBP2-220ENST00000615665 ARHGAP35Q9NRY4 1499 aa19.59■□□□□ 0.73
SSBP2-220ENST00000615665 CUX1P39880 1505 aa19.59■□□□□ 0.73
SSBP2-220ENST00000615665 BCANQ96GW7 911 aa19.59■□□□□ 0.73
SSBP2-220ENST00000615665 CHMP7Q8WUX9 453 aaPredicted RBP19.58■□□□□ 0.73
SSBP2-220ENST00000615665 RAB3GAP2Q9H2M9 1393 aa19.58■□□□□ 0.72
SSBP2-220ENST00000615665 FHOD3Q2V2M9 1422 aa19.57■□□□□ 0.72
SSBP2-220ENST00000615665 HIRIP3Q9BW71 556 aaPredicted RBP19.57■□□□□ 0.72
SSBP2-220ENST00000615665 FMN1Q68DA7 1419 aa19.56■□□□□ 0.72
SSBP2-220ENST00000615665 DHX57Q6P158 1386 aaKnown RBP19.55■□□□□ 0.72
SSBP2-220ENST00000615665 ARAP1Q96P48 1450 aa19.53■□□□□ 0.72
SSBP2-220ENST00000615665 RAD54L2Q9Y4B4 1467 aa19.47■□□□□ 0.71
SSBP2-220ENST00000615665 TIMELESSQ9UNS1 1208 aa19.46■□□□□ 0.71
SSBP2-220ENST00000615665 SLC4A1APQ9BWU0 796 aaKnown RBP19.41■□□□□ 0.7
SSBP2-220ENST00000615665 CC2D2AQ9P2K1 1620 aa19.4■□□□□ 0.7
SSBP2-220ENST00000615665 BIVM-ERCC5R4GMW8 1640 aa19.4■□□□□ 0.7
SSBP2-220ENST00000615665 ERCC6Q03468 1493 aa19.39■□□□□ 0.7
SSBP2-220ENST00000615665 FKBP8Q14318 412 aa19.39■□□□□ 0.69
SSBP2-220ENST00000615665 EIF4G2P78344 907 aaKnown RBP eCLIP19.39■□□□□ 0.69
SSBP2-220ENST00000615665 HNRNPUQ00839 825 aaKnown RBP eCLIP19.37■□□□□ 0.69
SSBP2-220ENST00000615665 TSPY4P0CV99 314 aa19.37■□□□□ 0.69
SSBP2-220ENST00000615665 TSPY10P0CW01 314 aa19.37■□□□□ 0.69
SSBP2-220ENST00000615665 CFDP1Q9UEE9 299 aaPredicted RBP19.37■□□□□ 0.69
SSBP2-220ENST00000615665 RRBP1Q9P2E9 1410 aaKnown RBP19.36■□□□□ 0.69
SSBP2-220ENST00000615665 PLEKHD1A6NEE1 506 aa19.35■□□□□ 0.69
SSBP2-220ENST00000615665 LRRC9Q6ZRR7 1453 aa19.34■□□□□ 0.69
SSBP2-220ENST00000615665 GAPVD1Q14C86 1478 aa19.33■□□□□ 0.69
SSBP2-220ENST00000615665 NESP48681 1621 aa19.32■□□□□ 0.68
SSBP2-220ENST00000615665 PHLDB1Q86UU1 1377 aa19.32■□□□□ 0.68
SSBP2-220ENST00000615665 TOPBP1Q92547 1522 aa19.29■□□□□ 0.68
SSBP2-220ENST00000615665 POLA1P09884 1462 aaPredicted RBP19.27■□□□□ 0.68
SSBP2-220ENST00000615665 PPP1R15AO75807 674 aaPredicted RBP19.27■□□□□ 0.67
SSBP2-220ENST00000615665 FAM9BQ8IZU0 186 aa19.27■□□□□ 0.67
SSBP2-220ENST00000615665 CASKIN1Q8WXD9 1431 aa19.25■□□□□ 0.67
SSBP2-220ENST00000615665 DNMBPQ6XZF7 1577 aa19.24■□□□□ 0.67
SSBP2-220ENST00000615665 TIAM1Q13009 1591 aa19.22■□□□□ 0.67
SSBP2-220ENST00000615665 MRS2Q9HD23 443 aa19.22■□□□□ 0.67
SSBP2-220ENST00000615665 FYCO1Q9BQS8 1478 aa19.22■□□□□ 0.67
SSBP2-220ENST00000615665 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.2■□□□□ 0.66
SSBP2-220ENST00000615665 KDM2AQ9Y2K7 1162 aa19.2■□□□□ 0.66
SSBP2-220ENST00000615665 FGD6Q6ZV73 1430 aa19.2■□□□□ 0.66
SSBP2-220ENST00000615665 EFCAB5A4FU69 1503 aa19.19■□□□□ 0.66
SSBP2-220ENST00000615665 ABCA10Q8WWZ4 1543 aa19.17■□□□□ 0.66
SSBP2-220ENST00000615665 CCDC18Q5T9S5 1454 aa19.17■□□□□ 0.66
SSBP2-220ENST00000615665 MPHOSPH9Q99550 1183 aa19.16■□□□□ 0.66
SSBP2-220ENST00000615665 CARMIL2Q6F5E8 1435 aa19.15■□□□□ 0.66
SSBP2-220ENST00000615665 CCER2I3L3R5 266 aa19.15■□□□□ 0.66
SSBP2-220ENST00000615665 FOXD1Q16676 465 aa19.14■□□□□ 0.65
SSBP2-220ENST00000615665 SUPT16HQ9Y5B9 1047 aaKnown RBP19.14■□□□□ 0.65
SSBP2-220ENST00000615665 MYOM3Q5VTT5 1437 aa19.13■□□□□ 0.65
SSBP2-220ENST00000615665 HSPA5P11021 654 aaKnown RBP19.12■□□□□ 0.65
SSBP2-220ENST00000615665 AQRO60306 1485 aaKnown RBP eCLIP19.11■□□□□ 0.65
SSBP2-220ENST00000615665 KCNH8Q96L42 1107 aa19.1■□□□□ 0.65
SSBP2-220ENST00000615665 TMC1Q8TDI8 760 aa19.09■□□□□ 0.65
SSBP2-220ENST00000615665 NCOA2Q15596 1464 aa19.08■□□□□ 0.65
SSBP2-220ENST00000615665 MAP3K1Q13233 1512 aa19.07■□□□□ 0.64
SSBP2-220ENST00000615665 PCF11O94913 1555 aaKnown RBP19.06■□□□□ 0.64
SSBP2-220ENST00000615665 LAMC3Q9Y6N6 1575 aa19.06■□□□□ 0.64
SSBP2-220ENST00000615665 CUL7Q14999 1698 aa19.04■□□□□ 0.64
SSBP2-220ENST00000615665 UACAQ9BZF9 1416 aa19.04■□□□□ 0.64
SSBP2-220ENST00000615665 IRX6P78412 446 aaPredicted RBP19.03■□□□□ 0.64
SSBP2-220ENST00000615665 CARD11Q9BXL7 1154 aa19.03■□□□□ 0.64
SSBP2-220ENST00000615665 L3MBTL2Q969R5 705 aa19.03■□□□□ 0.64
SSBP2-220ENST00000615665 JPH4Q96JJ6 628 aa19.02■□□□□ 0.64
SSBP2-220ENST00000615665 GRIN2BQ13224 1484 aa19.02■□□□□ 0.64
SSBP2-220ENST00000615665 PKD2Q13563 968 aa19.02■□□□□ 0.63
SSBP2-220ENST00000615665 RGL3Q3MIN7 710 aa19.01■□□□□ 0.63
SSBP2-220ENST00000615665 DAXXQ9UER7 740 aaPredicted RBP19■□□□□ 0.63
SSBP2-220ENST00000615665 ANKRD30AQ9BXX3 1397 aa19■□□□□ 0.63
SSBP2-220ENST00000615665 RTL5Q5HYW3 569 aaPredicted RBP18.98■□□□□ 0.63
SSBP2-220ENST00000615665 MRC2Q9UBG0 1479 aa18.97■□□□□ 0.63
SSBP2-220ENST00000615665 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.97■□□□□ 0.637e-7■■■■□ 22.1
SSBP2-220ENST00000615665 URB2Q14146 1524 aaKnown RBP18.97■□□□□ 0.63
SSBP2-220ENST00000615665 EHBP1L1Q8N3D4 1523 aa18.96■□□□□ 0.63
SSBP2-220ENST00000615665 NPM1P06748 294 aaKnown RBP eCLIP18.95■□□□□ 0.62
SSBP2-220ENST00000615665 DNAJC5BQ9UF47 199 aa18.94■□□□□ 0.62
SSBP2-220ENST00000615665 SALL2Q9Y467 1007 aaPredicted RBP18.94■□□□□ 0.62
SSBP2-220ENST00000615665 NUP155O75694 1391 aa18.93■□□□□ 0.62
SSBP2-220ENST00000615665 HFM1A2PYH4 1435 aa18.92■□□□□ 0.62
SSBP2-220ENST00000615665 DCAF11Q8TEB1 546 aa18.92■□□□□ 0.62
SSBP2-220ENST00000615665 CHGAP10645 457 aaKnown RBP18.91■□□□□ 0.62
SSBP2-220ENST00000615665 PRDM2Q13029 1718 aa18.9■□□□□ 0.62
SSBP2-220ENST00000615665 IFT140Q96RY7 1462 aa18.89■□□□□ 0.62
SSBP2-220ENST00000615665 ZNF644Q9H582 1327 aaPredicted RBP18.89■□□□□ 0.61
SSBP2-220ENST00000615665 SUPT6HQ7KZ85 1726 aaKnown RBP18.88■□□□□ 0.61
SSBP2-220ENST00000615665 HECW1Q76N89 1606 aa18.87■□□□□ 0.61
SSBP2-220ENST00000615665 HNRNPMP52272 730 aaKnown RBP eCLIP18.86■□□□□ 0.611e-6■■■■□ 22.8
SSBP2-220ENST00000615665 CCDC136Q96JN2 1154 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms