RNA–Protein interactions for RNA: ENST00000611905.1

CCL16-205, Transcript of C-C motif chemokine ligand 16, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCL16, Length 1,506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL16-205ENST00000611905 SYNJ1O43426 1573 aa11.79□□□□□ -0.52
CCL16-205ENST00000611905 GOLGA3Q08378 1498 aa11.76□□□□□ -0.53
CCL16-205ENST00000611905 OSCARQ8IYS5 282 aa11.76□□□□□ -0.53
CCL16-205ENST00000611905 CEP162Q5TB80 1403 aa11.75□□□□□ -0.53
CCL16-205ENST00000611905 ZEB1P37275 1124 aaPredicted RBP11.75□□□□□ -0.53
CCL16-205ENST00000611905 ZBTB12Q9Y330 459 aaPredicted RBP11.75□□□□□ -0.53
CCL16-205ENST00000611905 TOP2BQ02880 1626 aa11.73□□□□□ -0.53
CCL16-205ENST00000611905 CEP164Q9UPV0 1460 aa11.72□□□□□ -0.53
CCL16-205ENST00000611905 KIF21BO75037 1637 aa11.72□□□□□ -0.53
CCL16-205ENST00000611905 CFTRP13569 1480 aa11.71□□□□□ -0.54
CCL16-205ENST00000611905 UBTFP17480 764 aaKnown RBP11.7□□□□□ -0.54
CCL16-205ENST00000611905 BIVM-ERCC5R4GMW8 1640 aa11.69□□□□□ -0.54
CCL16-205ENST00000611905 PPARGC1BQ86YN6 1023 aaKnown RBP11.68□□□□□ -0.54
CCL16-205ENST00000611905 GABBR2O75899 941 aa11.67□□□□□ -0.54
CCL16-205ENST00000611905 MYCNP04198 464 aaPredicted RBP11.67□□□□□ -0.54
CCL16-205ENST00000611905 CUX1P39880 1505 aa11.62□□□□□ -0.55
CCL16-205ENST00000611905 CADPSQ9ULU8 1353 aa11.61□□□□□ -0.55
CCL16-205ENST00000611905 C19orf67A6NJJ6 358 aa11.6□□□□□ -0.55
CCL16-205ENST00000611905 PRXQ9BXM0 1461 aa11.59□□□□□ -0.55
CCL16-205ENST00000611905 RAPGEF2Q9Y4G8 1499 aa11.59□□□□□ -0.55
CCL16-205ENST00000611905 PRKAR2AP13861 404 aaKnown RBP11.59□□□□□ -0.55
CCL16-205ENST00000611905 CLIP1P30622 1438 aa11.59□□□□□ -0.55
CCL16-205ENST00000611905 ERICH3Q5RHP9 1530 aa11.58□□□□□ -0.56
CCL16-205ENST00000611905 KIF27Q86VH2 1401 aa11.57□□□□□ -0.56
CCL16-205ENST00000611905 CC2D2AQ9P2K1 1620 aa11.55□□□□□ -0.56
CCL16-205ENST00000611905 PRDM2Q13029 1718 aa11.55□□□□□ -0.56
CCL16-205ENST00000611905 VPS8Q8N3P4 1428 aa11.54□□□□□ -0.56
CCL16-205ENST00000611905 ATXN8OSP0DMR3 200 aa11.53□□□□□ -0.56
CCL16-205ENST00000611905 SLC24A1O60721 1099 aa11.52□□□□□ -0.57
CCL16-205ENST00000611905 PELP1Q8IZL8 1130 aaKnown RBP11.5□□□□□ -0.57
CCL16-205ENST00000611905 MYT1Q01538 1121 aa11.48□□□□□ -0.57
CCL16-205ENST00000611905 ATF5Q9Y2D1 282 aaPredicted RBP11.48□□□□□ -0.57
CCL16-205ENST00000611905 IGF1RP08069 1367 aa11.47□□□□□ -0.57
CCL16-205ENST00000611905 CCER1Q8TC90 406 aaPredicted RBP11.45□□□□□ -0.58
CCL16-205ENST00000611905 FANCD2Q9BXW9 1451 aa11.44□□□□□ -0.58
CCL16-205ENST00000611905 CUX2O14529 1486 aa11.43□□□□□ -0.58
CCL16-205ENST00000611905 FGD5Q6ZNL6 1462 aa11.43□□□□□ -0.58
CCL16-205ENST00000611905 ARAP1Q96P48 1450 aa11.43□□□□□ -0.58
CCL16-205ENST00000611905 TTBK1Q5TCY1 1321 aaPredicted RBP11.42□□□□□ -0.58
CCL16-205ENST00000611905 POTEIP0CG38 1075 aa11.41□□□□□ -0.58
CCL16-205ENST00000611905 CLEC11AQ9Y240 323 aa11.41□□□□□ -0.58
CCL16-205ENST00000611905 CARMIL1Q5VZK9 1371 aa11.39□□□□□ -0.59
CCL16-205ENST00000611905 DNMBPQ6XZF7 1577 aa11.38□□□□□ -0.59
CCL16-205ENST00000611905 ARHGAP35Q9NRY4 1499 aa11.36□□□□□ -0.59
CCL16-205ENST00000611905 ABCA10Q8WWZ4 1543 aa11.36□□□□□ -0.59
CCL16-205ENST00000611905 TOPBP1Q92547 1522 aa11.36□□□□□ -0.59
CCL16-205ENST00000611905 LAMC3Q9Y6N6 1575 aa11.36□□□□□ -0.59
CCL16-205ENST00000611905 RANGAP1P46060 587 aaPredicted RBP11.35□□□□□ -0.59
CCL16-205ENST00000611905 SPDYE1Q8NFV5 336 aaPredicted RBP11.35□□□□□ -0.59
CCL16-205ENST00000611905 NESP48681 1621 aa11.34□□□□□ -0.59
CCL16-205ENST00000611905 POLA1P09884 1462 aaPredicted RBP11.32□□□□□ -0.6
CCL16-205ENST00000611905 SPDYE2BA6NHP3 402 aa11.31□□□□□ -0.6
CCL16-205ENST00000611905 SPDYE6P0CI01 402 aa11.31□□□□□ -0.6
CCL16-205ENST00000611905 SPDYE2Q495Y8 402 aa11.31□□□□□ -0.6
CCL16-205ENST00000611905 RAD54L2Q9Y4B4 1467 aa11.3□□□□□ -0.6
CCL16-205ENST00000611905 MAP3K1Q13233 1512 aa11.3□□□□□ -0.6
CCL16-205ENST00000611905 PDS5BQ9NTI5 1447 aa11.3□□□□□ -0.6
CCL16-205ENST00000611905 KANK4Q5T7N3 995 aaPredicted RBP11.3□□□□□ -0.6
CCL16-205ENST00000611905 URB2Q14146 1524 aaKnown RBP11.28□□□□□ -0.6
CCL16-205ENST00000611905 CHADLQ6NUI6 762 aa11.28□□□□□ -0.6
CCL16-205ENST00000611905 RRBP1Q9P2E9 1410 aaKnown RBP11.27□□□□□ -0.6
CCL16-205ENST00000611905 POTEMA6NI47 508 aa11.27□□□□□ -0.61
CCL16-205ENST00000611905 CUL7Q14999 1698 aa11.25□□□□□ -0.61
CCL16-205ENST00000611905 FHAD1B1AJZ9 1412 aa11.24□□□□□ -0.61
CCL16-205ENST00000611905 CLSPNQ9HAW4 1339 aa11.23□□□□□ -0.61
CCL16-205ENST00000611905 WDR97A6NE52 1622 aa11.22□□□□□ -0.61
CCL16-205ENST00000611905 EFCAB5A4FU69 1503 aa11.21□□□□□ -0.61
CCL16-205ENST00000611905 POTEGQ6S5H5 508 aa11.2□□□□□ -0.62
CCL16-205ENST00000611905 CCNB3Q8WWL7 1395 aa11.2□□□□□ -0.62
CCL16-205ENST00000611905 TIAM1Q13009 1591 aa11.2□□□□□ -0.62
CCL16-205ENST00000611905 AMER1Q5JTC6 1135 aaPredicted RBP11.19□□□□□ -0.62
CCL16-205ENST00000611905 AQRO60306 1485 aaKnown RBP eCLIP11.19□□□□□ -0.62
CCL16-205ENST00000611905 ABCA5Q8WWZ7 1642 aa11.19□□□□□ -0.62
CCL16-205ENST00000611905 GAPVD1Q14C86 1478 aa11.19□□□□□ -0.62
CCL16-205ENST00000611905 DCBLD2Q96PD2 775 aa11.19□□□□□ -0.62
CCL16-205ENST00000611905 LRRC9Q6ZRR7 1453 aa11.18□□□□□ -0.62
CCL16-205ENST00000611905 TDRD9Q8NDG6 1382 aaKnown RBP11.17□□□□□ -0.62
CCL16-205ENST00000611905 CD44P16070 742 aaKnown RBP11.17□□□□□ -0.62
CCL16-205ENST00000611905 CASKIN1Q8WXD9 1431 aa11.17□□□□□ -0.62
CCL16-205ENST00000611905 ZNF316A6NFI3 1004 aaPredicted RBP11.16□□□□□ -0.62
CCL16-205ENST00000611905 OTUD5Q96G74 571 aa11.16□□□□□ -0.62
CCL16-205ENST00000611905 FYCO1Q9BQS8 1478 aa11.15□□□□□ -0.62
CCL16-205ENST00000611905 DHX57Q6P158 1386 aaKnown RBP11.15□□□□□ -0.62
CCL16-205ENST00000611905 TARBP1Q13395 1621 aaKnown RBP11.15□□□□□ -0.63
CCL16-205ENST00000611905 KIF21AQ7Z4S6 1674 aa11.14□□□□□ -0.63
CCL16-205ENST00000611905 DIEXFQ68CQ4 756 aaKnown RBP11.14□□□□□ -0.63
CCL16-205ENST00000611905 FHOD3Q2V2M9 1422 aa11.13□□□□□ -0.63
CCL16-205ENST00000611905 FMN1Q68DA7 1419 aa11.13□□□□□ -0.63
CCL16-205ENST00000611905 CTTNBP2Q8WZ74 1663 aa11.13□□□□□ -0.63
CCL16-205ENST00000611905 CLCN6P51797 869 aa11.13□□□□□ -0.63
CCL16-205ENST00000611905 CFAP43Q8NDM7 1665 aa11.12□□□□□ -0.63
CCL16-205ENST00000611905 PCF11O94913 1555 aaKnown RBP11.12□□□□□ -0.63
CCL16-205ENST00000611905 P3H3Q8IVL6 736 aa11.12□□□□□ -0.63
CCL16-205ENST00000611905 MRC2Q9UBG0 1479 aa11.12□□□□□ -0.63
CCL16-205ENST00000611905 FKBP8Q14318 412 aa11.11□□□□□ -0.63
CCL16-205ENST00000611905 FBLN2P98095 1184 aa11.1□□□□□ -0.63
CCL16-205ENST00000611905 PHLDB1Q86UU1 1377 aa11.1□□□□□ -0.63
CCL16-205ENST00000611905 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.1□□□□□ -0.63
CCL16-205ENST00000611905 SAMD9Q5K651 1589 aa11.1□□□□□ -0.63
CCL16-205ENST00000611905 RTN4Q9NQC3 1192 aaKnown RBP11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms