RNA–Protein interactions for RNA: ENST00000611905.1

CCL16-205, Transcript of C-C motif chemokine ligand 16, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCL16, Length 1,506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL16-205ENST00000611905 AEBP2Q6ZN18 517 aaPredicted RBP22.02■■□□□ 1.12
CCL16-205ENST00000611905 CHIC1Q5VXU3 224 aa20.57■□□□□ 0.88
CCL16-205ENST00000611905 SENP3Q9H4L4 574 aaPredicted RBP18.93■□□□□ 0.62
CCL16-205ENST00000611905 PHF23Q9BUL5 403 aaPredicted RBP18.56■□□□□ 0.56
CCL16-205ENST00000611905 POTEDQ86YR6 584 aa18.08■□□□□ 0.48
CCL16-205ENST00000611905 FOXD1Q16676 465 aa17.75■□□□□ 0.43
CCL16-205ENST00000611905 MSH5O43196 834 aa16.96■□□□□ 0.3
CCL16-205ENST00000611905 PIAS4Q8N2W9 510 aaPredicted RBP16.4■□□□□ 0.22
CCL16-205ENST00000611905 NISCHQ9Y2I1 1504 aa16.11■□□□□ 0.17
CCL16-205ENST00000611905 PPP6R1Q9UPN7 881 aa15.91■□□□□ 0.14
CCL16-205ENST00000611905 ADRA2BP18089 450 aa15.83■□□□□ 0.12
CCL16-205ENST00000611905 PLPPR3Q6T4P5 718 aa15.61■□□□□ 0.09
CCL16-205ENST00000611905 CACNB1Q02641 598 aaPredicted RBP15.12■□□□□ 0.01
CCL16-205ENST00000611905 DMRT2Q9Y5R5 561 aa14.87□□□□□ -0.03
CCL16-205ENST00000611905 MAPK8IP2Q13387 824 aaPredicted RBP14.81□□□□□ -0.04
CCL16-205ENST00000611905 SCAF1Q9H7N4 1312 aaKnown RBP14.46□□□□□ -0.1
CCL16-205ENST00000611905 RNF39Q9H2S5 420 aa14.37□□□□□ -0.11
CCL16-205ENST00000611905 DCAF8L1A6NGE4 600 aa14.36□□□□□ -0.11
CCL16-205ENST00000611905 C1QBPQ07021 282 aaKnown RBP14.11□□□□□ -0.15
CCL16-205ENST00000611905 POTEHQ6S545 545 aa13.99□□□□□ -0.17
CCL16-205ENST00000611905 HOXD11P31277 338 aaPredicted RBP13.95□□□□□ -0.18
CCL16-205ENST00000611905 CCDC180Q9P1Z9 1646 aa13.82□□□□□ -0.2
CCL16-205ENST00000611905 RNF216Q9NWF9 866 aaPredicted RBP13.62□□□□□ -0.23
CCL16-205ENST00000611905 DNAJC5BQ9UF47 199 aa13.61□□□□□ -0.23
CCL16-205ENST00000611905 ZCCHC6Q5VYS8 1495 aaKnown RBP13.6□□□□□ -0.23
CCL16-205ENST00000611905 PPP4R3CPQ6ZMV5 832 aa13.58□□□□□ -0.24
CCL16-205ENST00000611905 CNKSR2Q8WXI2 1034 aa13.52□□□□□ -0.25
CCL16-205ENST00000611905 SHROOM4Q9ULL8 1493 aa13.37□□□□□ -0.27
CCL16-205ENST00000611905 DCAF1Q9Y4B6 1507 aa13.34□□□□□ -0.27
CCL16-205ENST00000611905 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.34□□□□□ -0.279e-7■■□□□ 12.2
CCL16-205ENST00000611905 DCAF8L2P0C7V8 631 aa13.18□□□□□ -0.3
CCL16-205ENST00000611905 DSG3P32926 999 aa13.17□□□□□ -0.3
CCL16-205ENST00000611905 KCNA4P22459 653 aa13.13□□□□□ -0.31
CCL16-205ENST00000611905 SUPT5HO00267 1087 aaKnown RBP13.08□□□□□ -0.32
CCL16-205ENST00000611905 CAPN15O75808 1086 aa13.07□□□□□ -0.32
CCL16-205ENST00000611905 MYO15BQ96JP2 1530 aa13.06□□□□□ -0.32
CCL16-205ENST00000611905 SPINK5Q9NQ38 1064 aaPredicted RBP13.03□□□□□ -0.32
CCL16-205ENST00000611905 U3KPZ7 1027 aaPredicted RBP12.95□□□□□ -0.34
CCL16-205ENST00000611905 NACADO15069 1562 aa12.83□□□□□ -0.36
CCL16-205ENST00000611905 NCBP3Q53F19 620 aaKnown RBP12.8□□□□□ -0.36
CCL16-205ENST00000611905 ABCC9O60706 1549 aa12.77□□□□□ -0.37
CCL16-205ENST00000611905 SCRIBQ14160 1630 aa12.75□□□□□ -0.37
CCL16-205ENST00000611905 SP7Q8TDD2 431 aaPredicted RBP12.7□□□□□ -0.38
CCL16-205ENST00000611905 ABCB7O75027 752 aa12.69□□□□□ -0.38
CCL16-205ENST00000611905 CHRDL2Q6WN34 429 aa12.68□□□□□ -0.38
CCL16-205ENST00000611905 RSF1Q96T23 1441 aaPredicted RBP12.67□□□□□ -0.38
CCL16-205ENST00000611905 TRHP20396 242 aaPredicted RBP12.65□□□□□ -0.38
CCL16-205ENST00000611905 EHMT2Q96KQ7 1210 aa12.62□□□□□ -0.39
CCL16-205ENST00000611905 RB1CC1Q8TDY2 1594 aa12.61□□□□□ -0.39
CCL16-205ENST00000611905 NPM3O75607 178 aaKnown RBP12.61□□□□□ -0.39
CCL16-205ENST00000611905 RBM42Q9BTD8 480 aaKnown RBP12.6□□□□□ -0.39
CCL16-205ENST00000611905 SLC4A1APQ9BWU0 796 aaKnown RBP12.57□□□□□ -0.4
CCL16-205ENST00000611905 ZNF219Q9P2Y4 722 aaPredicted RBP12.56□□□□□ -0.4
CCL16-205ENST00000611905 CECR2Q9BXF3 1484 aa12.5□□□□□ -0.41
CCL16-205ENST00000611905 APLP2Q06481 763 aa12.47□□□□□ -0.41
CCL16-205ENST00000611905 MROH2BQ7Z745 1585 aa12.46□□□□□ -0.41
CCL16-205ENST00000611905 BAZ1AQ9NRL2 1556 aaPredicted RBP12.39□□□□□ -0.43
CCL16-205ENST00000611905 WIZO95785 1651 aa12.34□□□□□ -0.43
CCL16-205ENST00000611905 UNC13AQ9UPW8 1703 aa12.3□□□□□ -0.44
CCL16-205ENST00000611905 TRIM41Q8WV44 630 aa12.29□□□□□ -0.44
CCL16-205ENST00000611905 CSRNP3Q8WYN3 585 aa12.29□□□□□ -0.44
CCL16-205ENST00000611905 SMARCA4P51532 1647 aa12.27□□□□□ -0.44
CCL16-205ENST00000611905 LOC105371045A0A1W2PR82 267 aa12.27□□□□□ -0.45
CCL16-205ENST00000611905 SLC4A2P04920 1241 aa12.26□□□□□ -0.45
CCL16-205ENST00000611905 BICRAQ9NZM4 1560 aa12.25□□□□□ -0.45
CCL16-205ENST00000611905 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.25□□□□□ -0.45
CCL16-205ENST00000611905 HNRNPUL2Q1KMD3 747 aaKnown RBP12.25□□□□□ -0.45
CCL16-205ENST00000611905 TOP2AP11388 1531 aaKnown RBP12.25□□□□□ -0.45
CCL16-205ENST00000611905 HAX1O00165 279 aa12.22□□□□□ -0.45
CCL16-205ENST00000611905 EIF4G1Q04637 1599 aaKnown RBP12.18□□□□□ -0.46
CCL16-205ENST00000611905 PIP4P2Q8N4L2 257 aa12.18□□□□□ -0.46
CCL16-205ENST00000611905 PABPN1Q86U42 306 aaKnown RBP eCLIP12.16□□□□□ -0.46
CCL16-205ENST00000611905 CCDC88BA6NC98 1476 aa12.16□□□□□ -0.46
CCL16-205ENST00000611905 PEG3Q9GZU2 1588 aa12.14□□□□□ -0.47
CCL16-205ENST00000611905 SAMD1Q6SPF0 538 aaPredicted RBP12.14□□□□□ -0.47
CCL16-205ENST00000611905 SMARCA2P51531 1590 aa12.14□□□□□ -0.47
CCL16-205ENST00000611905 AKT1S1Q96B36 256 aa12.11□□□□□ -0.47
CCL16-205ENST00000611905 POLA2Q14181 598 aa12.09□□□□□ -0.47
CCL16-205ENST00000611905 ZBTB22O15209 634 aa12.08□□□□□ -0.48
CCL16-205ENST00000611905 PCGF6Q9BYE7 350 aa12.07□□□□□ -0.48
CCL16-205ENST00000611905 HRCP23327 699 aa12.06□□□□□ -0.48
CCL16-205ENST00000611905 FAM9AQ8IZU1 332 aaPredicted RBP12.05□□□□□ -0.48
CCL16-205ENST00000611905 ATAD2BQ9ULI0 1458 aa12.03□□□□□ -0.48
CCL16-205ENST00000611905 TRIM26Q12899 539 aaPredicted RBP12.01□□□□□ -0.49
CCL16-205ENST00000611905 REM2Q8IYK8 340 aaPredicted RBP12.01□□□□□ -0.49
CCL16-205ENST00000611905 EVX2Q03828 476 aa11.99□□□□□ -0.49
CCL16-205ENST00000611905 FOXD4L1Q9NU39 408 aa11.99□□□□□ -0.49
CCL16-205ENST00000611905 ABCC8Q09428 1581 aa11.97□□□□□ -0.49
CCL16-205ENST00000611905 FXR2P51116 673 aaKnown RBP eCLIP11.95□□□□□ -0.5
CCL16-205ENST00000611905 BAZ1BQ9UIG0 1483 aaKnown RBP11.95□□□□□ -0.5
CCL16-205ENST00000611905 EEA1Q15075 1411 aa11.94□□□□□ -0.5
CCL16-205ENST00000611905 PLSCR2Q9NRY7 297 aa11.94□□□□□ -0.5
CCL16-205ENST00000611905 PITPNM1O00562 1244 aa11.9□□□□□ -0.5
CCL16-205ENST00000611905 LHX8Q68G74 356 aa11.9□□□□□ -0.5
CCL16-205ENST00000611905 NCAPD3P42695 1498 aa11.89□□□□□ -0.51
CCL16-205ENST00000611905 WRNQ14191 1432 aaPredicted RBP eCLIP11.89□□□□□ -0.51
CCL16-205ENST00000611905 SOGA1O94964 1423 aa11.86□□□□□ -0.51
CCL16-205ENST00000611905 HMGXB3Q12766 1538 aa11.85□□□□□ -0.51
CCL16-205ENST00000611905 TNIKQ9UKE5 1360 aa11.83□□□□□ -0.52
CCL16-205ENST00000611905 RUSC2Q8N2Y8 1516 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms