RNA–Protein interactions for RNA: ENST00000611598.1

PCDHGB1-202, Transcript of protocadherin gamma subfamily B, 1, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGB1, Length 2,592 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1-202ENST00000611598 PHLDB1Q86UU1 1377 aa21.65■■□□□ 1.06
PCDHGB1-202ENST00000611598 DDX10Q13206 875 aaKnown RBP21.65■■□□□ 1.06
PCDHGB1-202ENST00000611598 DNAJC5BQ9UF47 199 aa21.65■■□□□ 1.06
PCDHGB1-202ENST00000611598 BCANQ96GW7 911 aa21.63■■□□□ 1.05
PCDHGB1-202ENST00000611598 LRRC9Q6ZRR7 1453 aa21.62■■□□□ 1.05
PCDHGB1-202ENST00000611598 MAP3K1Q13233 1512 aa21.61■■□□□ 1.05
PCDHGB1-202ENST00000611598 FAM50AQ14320 339 aaKnown RBP21.6■■□□□ 1.05
PCDHGB1-202ENST00000611598 CARMIL1Q5VZK9 1371 aa21.56■■□□□ 1.04
PCDHGB1-202ENST00000611598 HIRIP3Q9BW71 556 aaPredicted RBP21.56■■□□□ 1.04
PCDHGB1-202ENST00000611598 FKBP8Q14318 412 aa21.55■■□□□ 1.04
PCDHGB1-202ENST00000611598 PPP1R15AO75807 674 aaPredicted RBP21.54■■□□□ 1.04
PCDHGB1-202ENST00000611598 P3H3Q8IVL6 736 aa21.53■■□□□ 1.04
PCDHGB1-202ENST00000611598 PCF11O94913 1555 aaKnown RBP21.5■■□□□ 1.03
PCDHGB1-202ENST00000611598 ANP32EQ9BTT0 268 aa21.49■■□□□ 1.03
PCDHGB1-202ENST00000611598 ATP1B4Q9UN42 357 aaPredicted RBP21.49■■□□□ 1.03
PCDHGB1-202ENST00000611598 FGD5Q6ZNL6 1462 aa21.48■■□□□ 1.03
PCDHGB1-202ENST00000611598 CFAP43Q8NDM7 1665 aa21.47■■□□□ 1.03
PCDHGB1-202ENST00000611598 FHAD1B1AJZ9 1412 aa21.46■■□□□ 1.03
PCDHGB1-202ENST00000611598 PRDM2Q13029 1718 aa21.45■■□□□ 1.02
PCDHGB1-202ENST00000611598 TRIM52Q96A61 297 aa21.44■■□□□ 1.02
PCDHGB1-202ENST00000611598 FHOD3Q2V2M9 1422 aa21.42■■□□□ 1.02
PCDHGB1-202ENST00000611598 TIMELESSQ9UNS1 1208 aa21.41■■□□□ 1.02
PCDHGB1-202ENST00000611598 CADPSQ9ULU8 1353 aa21.38■■□□□ 1.01
PCDHGB1-202ENST00000611598 ANP32CO43423 234 aa21.38■■□□□ 1.01
PCDHGB1-202ENST00000611598 CCER2I3L3R5 266 aa21.37■■□□□ 1.01
PCDHGB1-202ENST00000611598 NEFLP07196 543 aa21.35■■□□□ 1.01
PCDHGB1-202ENST00000611598 FYCO1Q9BQS8 1478 aa21.32■■□□□ 1
PCDHGB1-202ENST00000611598 RBM19Q9Y4C8 960 aaKnown RBP21.3■■□□□ 1
PCDHGB1-202ENST00000611598 TONSLQ96HA7 1378 aa21.29■■□□□ 1
PCDHGB1-202ENST00000611598 CASKIN1Q8WXD9 1431 aa21.29■■□□□ 1
PCDHGB1-202ENST00000611598 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.29■■□□□ 1
PCDHGB1-202ENST00000611598 FGD6Q6ZV73 1430 aa21.27■■□□□ 1
PCDHGB1-202ENST00000611598 CCDC18Q5T9S5 1454 aa21.26■□□□□ 0.99
PCDHGB1-202ENST00000611598 RAD54L2Q9Y4B4 1467 aa21.26■□□□□ 0.99
PCDHGB1-202ENST00000611598 PTPRKQ15262 1439 aa21.26■□□□□ 0.99
PCDHGB1-202ENST00000611598 EFCAB5A4FU69 1503 aa21.24■□□□□ 0.99
PCDHGB1-202ENST00000611598 AQRO60306 1485 aaKnown RBP eCLIP21.23■□□□□ 0.99
PCDHGB1-202ENST00000611598 FANCD2Q9BXW9 1451 aa21.21■□□□□ 0.99
PCDHGB1-202ENST00000611598 UACAQ9BZF9 1416 aa21.2■□□□□ 0.98
PCDHGB1-202ENST00000611598 HFM1A2PYH4 1435 aa21.2■□□□□ 0.98
PCDHGB1-202ENST00000611598 PTPN23Q9H3S7 1636 aa21.18■□□□□ 0.98
PCDHGB1-202ENST00000611598 SNAPC4Q5SXM2 1469 aa21.18■□□□□ 0.98
PCDHGB1-202ENST00000611598 MTUS2Q5JR59 1369 aa21.18■□□□□ 0.98
PCDHGB1-202ENST00000611598 ABCA10Q8WWZ4 1543 aa21.17■□□□□ 0.98
PCDHGB1-202ENST00000611598 POLA1P09884 1462 aaPredicted RBP21.16■□□□□ 0.98
PCDHGB1-202ENST00000611598 FMN1Q68DA7 1419 aa21.15■□□□□ 0.98
PCDHGB1-202ENST00000611598 KDM5BQ9UGL1 1544 aa21.15■□□□□ 0.98
PCDHGB1-202ENST00000611598 NAIPQ13075 1403 aa21.15■□□□□ 0.98
PCDHGB1-202ENST00000611598 CTTNBP2Q8WZ74 1663 aa21.14■□□□□ 0.97
PCDHGB1-202ENST00000611598 HNRNPUQ00839 825 aaKnown RBP eCLIP21.13■□□□□ 0.97
PCDHGB1-202ENST00000611598 DNMBPQ6XZF7 1577 aa21.13■□□□□ 0.97
PCDHGB1-202ENST00000611598 IRX6P78412 446 aaPredicted RBP21.12■□□□□ 0.97
PCDHGB1-202ENST00000611598 TOPBP1Q92547 1522 aa21.11■□□□□ 0.97
PCDHGB1-202ENST00000611598 CUL7Q14999 1698 aa21.1■□□□□ 0.97
PCDHGB1-202ENST00000611598 NCOA2Q15596 1464 aa21.1■□□□□ 0.97
PCDHGB1-202ENST00000611598 LRRIQ1Q96JM4 1722 aa21.09■□□□□ 0.97
PCDHGB1-202ENST00000611598 MYOM3Q5VTT5 1437 aa21.08■□□□□ 0.96
PCDHGB1-202ENST00000611598 MSH5O43196 834 aa21.08■□□□□ 0.96
PCDHGB1-202ENST00000611598 WASHC2AQ641Q2 1341 aa21.07■□□□□ 0.96
PCDHGB1-202ENST00000611598 BCL11AQ9H165 835 aa21.05■□□□□ 0.96
PCDHGB1-202ENST00000611598 HSPA5P11021 654 aaKnown RBP21.05■□□□□ 0.96
PCDHGB1-202ENST00000611598 RRP7BPQ9NSQ0 103 aa21.03■□□□□ 0.96
PCDHGB1-202ENST00000611598 NESP48681 1621 aa21.02■□□□□ 0.96
PCDHGB1-202ENST00000611598 GRIN2BQ13224 1484 aa21.02■□□□□ 0.96
PCDHGB1-202ENST00000611598 CHIC2Q9UKJ5 165 aa21.01■□□□□ 0.95
PCDHGB1-202ENST00000611598 SAMD9Q5K651 1589 aa21.01■□□□□ 0.95
PCDHGB1-202ENST00000611598 DENND4BO75064 1496 aaPredicted RBP21■□□□□ 0.95
PCDHGB1-202ENST00000611598 CCDC184Q52MB2 194 aa21■□□□□ 0.95
PCDHGB1-202ENST00000611598 SUPT6HQ7KZ85 1726 aaKnown RBP20.99■□□□□ 0.95
PCDHGB1-202ENST00000611598 TDRD9Q8NDG6 1382 aaKnown RBP20.96■□□□□ 0.95
PCDHGB1-202ENST00000611598 MAGI3Q5TCQ9 1506 aa20.96■□□□□ 0.95
PCDHGB1-202ENST00000611598 EHBP1L1Q8N3D4 1523 aa20.96■□□□□ 0.95
PCDHGB1-202ENST00000611598 LAMC3Q9Y6N6 1575 aa20.96■□□□□ 0.95
PCDHGB1-202ENST00000611598 UGGT2Q9NYU1 1516 aa20.95■□□□□ 0.94
PCDHGB1-202ENST00000611598 CDK11AQ9UQ88 783 aaPredicted RBP20.95■□□□□ 0.94
PCDHGB1-202ENST00000611598 KDM6BO15054 1643 aa20.94■□□□□ 0.94
PCDHGB1-202ENST00000611598 EIF4G2P78344 907 aaKnown RBP eCLIP20.93■□□□□ 0.94
PCDHGB1-202ENST00000611598 C11orf95C9JLR9 678 aaPredicted RBP20.92■□□□□ 0.94
PCDHGB1-202ENST00000611598 ARHGEF11O15085 1522 aa20.92■□□□□ 0.94
PCDHGB1-202ENST00000611598 FANCIQ9NVI1 1328 aa20.92■□□□□ 0.94
PCDHGB1-202ENST00000611598 THOC2Q8NI27 1593 aaKnown RBP20.92■□□□□ 0.94
PCDHGB1-202ENST00000611598 CNTLNQ9NXG0 1405 aa20.92■□□□□ 0.94
PCDHGB1-202ENST00000611598 FOXD1Q16676 465 aa20.91■□□□□ 0.94
PCDHGB1-202ENST00000611598 URB2Q14146 1524 aaKnown RBP20.9■□□□□ 0.94
PCDHGB1-202ENST00000611598 HECW1Q76N89 1606 aa20.9■□□□□ 0.94
PCDHGB1-202ENST00000611598 L3MBTL2Q969R5 705 aa20.89■□□□□ 0.93
PCDHGB1-202ENST00000611598 GCC2Q8IWJ2 1684 aa20.88■□□□□ 0.93
PCDHGB1-202ENST00000611598 ABCA5Q8WWZ7 1642 aa20.88■□□□□ 0.93
PCDHGB1-202ENST00000611598 FAM9BQ8IZU0 186 aa20.87■□□□□ 0.93
PCDHGB1-202ENST00000611598 TCOF1Q13428 1488 aaKnown RBP20.87■□□□□ 0.93
PCDHGB1-202ENST00000611598 MPHOSPH9Q99550 1183 aa20.87■□□□□ 0.93
PCDHGB1-202ENST00000611598 GAPVD1Q14C86 1478 aa20.87■□□□□ 0.93
PCDHGB1-202ENST00000611598 PRKRIP1Q9H875 184 aaPredicted RBP20.86■□□□□ 0.93
PCDHGB1-202ENST00000611598 PPP4R2Q9NY27 417 aa20.85■□□□□ 0.93
PCDHGB1-202ENST00000611598 CCDC7Q96M83 1385 aa20.84■□□□□ 0.93
PCDHGB1-202ENST00000611598 NCOA1Q15788 1441 aa20.84■□□□□ 0.93
PCDHGB1-202ENST00000611598 MRS2Q9HD23 443 aa20.82■□□□□ 0.92
PCDHGB1-202ENST00000611598 ERICH6BQ5W0A0 696 aa20.81■□□□□ 0.92
PCDHGB1-202ENST00000611598 PDS5BQ9NTI5 1447 aa20.81■□□□□ 0.92
PCDHGB1-202ENST00000611598 ARID3CA6NKF2 412 aa20.81■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms