RNA–Protein interactions for RNA: ENST00000611216.4

KDM2B-219, Transcript of lysine demethylase 2B, humanhuman

TSL 5 BASIC

Gene KDM2B, Length 3,434 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM2B-219ENST00000611216 CLSPNQ9HAW4 1339 aa18.66■□□□□ 0.58
KDM2B-219ENST00000611216 FGD5Q6ZNL6 1462 aa18.65■□□□□ 0.58
KDM2B-219ENST00000611216 FHOD3Q2V2M9 1422 aa18.64■□□□□ 0.57
KDM2B-219ENST00000611216 HMGXB3Q12766 1538 aa18.63■□□□□ 0.57
KDM2B-219ENST00000611216 CADPSQ9ULU8 1353 aa18.62■□□□□ 0.57
KDM2B-219ENST00000611216 RAD54L2Q9Y4B4 1467 aa18.62■□□□□ 0.57
KDM2B-219ENST00000611216 TRIM52Q96A61 297 aa18.58■□□□□ 0.57
KDM2B-219ENST00000611216 SETD5Q9C0A6 1442 aa18.57■□□□□ 0.56
KDM2B-219ENST00000611216 DNAJC5BQ9UF47 199 aa18.54■□□□□ 0.56
KDM2B-219ENST00000611216 NESP48681 1621 aa18.54■□□□□ 0.56
KDM2B-219ENST00000611216 LRRC9Q6ZRR7 1453 aa18.53■□□□□ 0.56
KDM2B-219ENST00000611216 CHIC2Q9UKJ5 165 aa18.53■□□□□ 0.56
KDM2B-219ENST00000611216 MAPKBP1O60336 1514 aa18.52■□□□□ 0.56
KDM2B-219ENST00000611216 TIAM1Q13009 1591 aa18.51■□□□□ 0.55
KDM2B-219ENST00000611216 WDR97A6NE52 1622 aa18.5■□□□□ 0.55
KDM2B-219ENST00000611216 TDRD9Q8NDG6 1382 aaKnown RBP18.49■□□□□ 0.55
KDM2B-219ENST00000611216 FKBP8Q14318 412 aa18.49■□□□□ 0.55
KDM2B-219ENST00000611216 FANCD2Q9BXW9 1451 aa18.48■□□□□ 0.55
KDM2B-219ENST00000611216 RRP7BPQ9NSQ0 103 aa18.45■□□□□ 0.54
KDM2B-219ENST00000611216 CNGB1Q14028 1251 aaPredicted RBP18.45■□□□□ 0.54
KDM2B-219ENST00000611216 PCF11O94913 1555 aaKnown RBP18.44■□□□□ 0.54
KDM2B-219ENST00000611216 MTUS2Q5JR59 1369 aa18.42■□□□□ 0.54
KDM2B-219ENST00000611216 FHAD1B1AJZ9 1412 aa18.41■□□□□ 0.54
KDM2B-219ENST00000611216 PPP1R15AO75807 674 aaPredicted RBP18.4■□□□□ 0.54
KDM2B-219ENST00000611216 CC2D2AQ9P2K1 1620 aa18.39■□□□□ 0.53
KDM2B-219ENST00000611216 TSHZ2Q9NRE2 1034 aa18.39■□□□□ 0.53
KDM2B-219ENST00000611216 TONSLQ96HA7 1378 aa18.38■□□□□ 0.53
KDM2B-219ENST00000611216 FOXD1Q16676 465 aa18.38■□□□□ 0.53
KDM2B-219ENST00000611216 ANP32CO43423 234 aa18.37■□□□□ 0.53
KDM2B-219ENST00000611216 POLA1P09884 1462 aaPredicted RBP18.37■□□□□ 0.53
KDM2B-219ENST00000611216 IRX6P78412 446 aaPredicted RBP18.36■□□□□ 0.53
KDM2B-219ENST00000611216 PTPRKQ15262 1439 aa18.32■□□□□ 0.52
KDM2B-219ENST00000611216 TOPBP1Q92547 1522 aa18.31■□□□□ 0.52
KDM2B-219ENST00000611216 SENP3-EIF4A1A0A087X0R7 540 aa18.29■□□□□ 0.52
KDM2B-219ENST00000611216 FGD6Q6ZV73 1430 aa18.27■□□□□ 0.52
KDM2B-219ENST00000611216 NEFLP07196 543 aa18.27■□□□□ 0.52
KDM2B-219ENST00000611216 CASKIN1Q8WXD9 1431 aa18.25■□□□□ 0.51
KDM2B-219ENST00000611216 CCDC18Q5T9S5 1454 aa18.25■□□□□ 0.51
KDM2B-219ENST00000611216 HNRNPUQ00839 825 aaKnown RBP eCLIP18.24■□□□□ 0.51
KDM2B-219ENST00000611216 AQRO60306 1485 aaKnown RBP eCLIP18.23■□□□□ 0.512e-7■■■■■ 30.3
KDM2B-219ENST00000611216 POLR3GLQ9BT43 218 aa18.22■□□□□ 0.51
KDM2B-219ENST00000611216 MAP3K1Q13233 1512 aa18.22■□□□□ 0.51
KDM2B-219ENST00000611216 ABCA10Q8WWZ4 1543 aa18.21■□□□□ 0.51
KDM2B-219ENST00000611216 FYCO1Q9BQS8 1478 aa18.21■□□□□ 0.51
KDM2B-219ENST00000611216 FMN1Q68DA7 1419 aa18.2■□□□□ 0.5
KDM2B-219ENST00000611216 DNMBPQ6XZF7 1577 aa18.19■□□□□ 0.5
KDM2B-219ENST00000611216 PRDM2Q13029 1718 aa18.19■□□□□ 0.5
KDM2B-219ENST00000611216 URB2Q14146 1524 aaKnown RBP18.18■□□□□ 0.5
KDM2B-219ENST00000611216 HSPA5P11021 654 aaKnown RBP18.18■□□□□ 0.5
KDM2B-219ENST00000611216 NCOA2Q15596 1464 aa18.17■□□□□ 0.5
KDM2B-219ENST00000611216 CFAP43Q8NDM7 1665 aa18.17■□□□□ 0.5
KDM2B-219ENST00000611216 CCDC184Q52MB2 194 aa18.16■□□□□ 0.5
KDM2B-219ENST00000611216 ZNF326Q5BKZ1 582 aaKnown RBP18.16■□□□□ 0.5
KDM2B-219ENST00000611216 GAPVD1Q14C86 1478 aa18.15■□□□□ 0.5
KDM2B-219ENST00000611216 FAM9BQ8IZU0 186 aa18.14■□□□□ 0.49
KDM2B-219ENST00000611216 NAIPQ13075 1403 aa18.14■□□□□ 0.49
KDM2B-219ENST00000611216 ZNF644Q9H582 1327 aaPredicted RBP18.13■□□□□ 0.49
KDM2B-219ENST00000611216 SNAPC4Q5SXM2 1469 aa18.13■□□□□ 0.49
KDM2B-219ENST00000611216 TIMELESSQ9UNS1 1208 aa18.12■□□□□ 0.49
KDM2B-219ENST00000611216 L3MBTL2Q969R5 705 aa18.11■□□□□ 0.49
KDM2B-219ENST00000611216 ZNF777Q9ULD5 760 aaPredicted RBP18.11■□□□□ 0.49
KDM2B-219ENST00000611216 MYOM3Q5VTT5 1437 aa18.11■□□□□ 0.49
KDM2B-219ENST00000611216 WASHC2AQ641Q2 1341 aa18.11■□□□□ 0.49
KDM2B-219ENST00000611216 UACAQ9BZF9 1416 aa18.1■□□□□ 0.49
KDM2B-219ENST00000611216 HFM1A2PYH4 1435 aa18.1■□□□□ 0.49
KDM2B-219ENST00000611216 C11orf95C9JLR9 678 aaPredicted RBP18.09■□□□□ 0.49
KDM2B-219ENST00000611216 CCER2I3L3R5 266 aa18.09■□□□□ 0.49
KDM2B-219ENST00000611216 MPHOSPH9Q99550 1183 aa18.09■□□□□ 0.49
KDM2B-219ENST00000611216 FBLN2P98095 1184 aa18.08■□□□□ 0.49
KDM2B-219ENST00000611216 EFCAB5A4FU69 1503 aa18.08■□□□□ 0.49
KDM2B-219ENST00000611216 MYT1Q01538 1121 aa18.07■□□□□ 0.48
KDM2B-219ENST00000611216 PTPN23Q9H3S7 1636 aa18.06■□□□□ 0.48
KDM2B-219ENST00000611216 CDK13Q14004 1512 aaKnown RBP18.05■□□□□ 0.48
KDM2B-219ENST00000611216 RBM19Q9Y4C8 960 aaKnown RBP18.05■□□□□ 0.48
KDM2B-219ENST00000611216 MAGI3Q5TCQ9 1506 aa18.05■□□□□ 0.48
KDM2B-219ENST00000611216 EIF4G2P78344 907 aaKnown RBP eCLIP18.05■□□□□ 0.489e-10■■■■■ 41.2
KDM2B-219ENST00000611216 CTTNBP2Q8WZ74 1663 aa18.04■□□□□ 0.48
KDM2B-219ENST00000611216 SLC4A1APQ9BWU0 796 aaKnown RBP18.02■□□□□ 0.48
KDM2B-219ENST00000611216 LRRIQ1Q96JM4 1722 aa18.02■□□□□ 0.47
KDM2B-219ENST00000611216 PDS5BQ9NTI5 1447 aa18.01■□□□□ 0.47
KDM2B-219ENST00000611216 GRIN2BQ13224 1484 aa18.01■□□□□ 0.47
KDM2B-219ENST00000611216 NBPF8Q3BBV2 869 aa18.01■□□□□ 0.47
KDM2B-219ENST00000611216 CUL7Q14999 1698 aa18.01■□□□□ 0.47
KDM2B-219ENST00000611216 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18■□□□□ 0.47
KDM2B-219ENST00000611216 MRS2Q9HD23 443 aa18■□□□□ 0.47
KDM2B-219ENST00000611216 KDM6BO15054 1643 aa17.99■□□□□ 0.47
KDM2B-219ENST00000611216 ANP32EQ9BTT0 268 aa17.98■□□□□ 0.47
KDM2B-219ENST00000611216 SUPT6HQ7KZ85 1726 aaKnown RBP17.93■□□□□ 0.46
KDM2B-219ENST00000611216 DENND4BO75064 1496 aaPredicted RBP17.93■□□□□ 0.46
KDM2B-219ENST00000611216 B4GALNT3Q6L9W6 998 aa17.92■□□□□ 0.46
KDM2B-219ENST00000611216 LAMC3Q9Y6N6 1575 aa17.91■□□□□ 0.46
KDM2B-219ENST00000611216 EPRSP07814 1512 aaKnown RBP17.91■□□□□ 0.46
KDM2B-219ENST00000611216 EHBP1L1Q8N3D4 1523 aa17.9■□□□□ 0.46
KDM2B-219ENST00000611216 SAMD9Q5K651 1589 aa17.9■□□□□ 0.46
KDM2B-219ENST00000611216 UGGT2Q9NYU1 1516 aa17.9■□□□□ 0.46
KDM2B-219ENST00000611216 ABCA5Q8WWZ7 1642 aa17.9■□□□□ 0.46
KDM2B-219ENST00000611216 KDM2AQ9Y2K7 1162 aa17.89■□□□□ 0.46
KDM2B-219ENST00000611216 KDM5BQ9UGL1 1544 aa17.89■□□□□ 0.45
KDM2B-219ENST00000611216 THOC2Q8NI27 1593 aaKnown RBP17.89■□□□□ 0.45
KDM2B-219ENST00000611216 PRKRIP1Q9H875 184 aaPredicted RBP17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms