RNA–Protein interactions for RNA: ENST00000611159.4

SAMD4B-214, Transcript of sterile alpha motif domain containing 4B, humanhuman

TSL 5 BASIC

Gene SAMD4B, Length 3,662 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMD4B-214ENST00000611159 ZEB1P37275 1124 aaPredicted RBP15.47■□□□□ 0.07
SAMD4B-214ENST00000611159 TARBP1Q13395 1621 aaKnown RBP15.45■□□□□ 0.06
SAMD4B-214ENST00000611159 ARID3CA6NKF2 412 aa15.42■□□□□ 0.06
SAMD4B-214ENST00000611159 ZNF608Q9ULD9 1512 aaPredicted RBP15.42■□□□□ 0.06
SAMD4B-214ENST00000611159 IFT140Q96RY7 1462 aa15.4■□□□□ 0.06
SAMD4B-214ENST00000611159 WDR97A6NE52 1622 aa15.39■□□□□ 0.05
SAMD4B-214ENST00000611159 AQRO60306 1485 aaKnown RBP eCLIP15.35■□□□□ 0.056e-7■■■■□ 25.9
SAMD4B-214ENST00000611159 TDRD9Q8NDG6 1382 aaKnown RBP15.35■□□□□ 0.05
SAMD4B-214ENST00000611159 EIF4G3O43432 1585 aaKnown RBP15.35■□□□□ 0.05
SAMD4B-214ENST00000611159 CENPBP07199 599 aaPredicted RBP15.35■□□□□ 0.05
SAMD4B-214ENST00000611159 ANO8Q9HCE9 1232 aaPredicted RBP15.34■□□□□ 0.05
SAMD4B-214ENST00000611159 ANP32EQ9BTT0 268 aa15.33■□□□□ 0.04
SAMD4B-214ENST00000611159 ABCA10Q8WWZ4 1543 aa15.32■□□□□ 0.04
SAMD4B-214ENST00000611159 CLIP1P30622 1438 aa15.29■□□□□ 0.04
SAMD4B-214ENST00000611159 ABCA5Q8WWZ7 1642 aa15.28■□□□□ 0.04
SAMD4B-214ENST00000611159 DIEXFQ68CQ4 756 aaKnown RBP15.28■□□□□ 0.04
SAMD4B-214ENST00000611159 PBRM1Q86U86 1689 aa15.26■□□□□ 0.03
SAMD4B-214ENST00000611159 FAM50AQ14320 339 aaKnown RBP15.25■□□□□ 0.03
SAMD4B-214ENST00000611159 AEBP2Q6ZN18 517 aaPredicted RBP15.25■□□□□ 0.03
SAMD4B-214ENST00000611159 GAPVD1Q14C86 1478 aa15.25■□□□□ 0.03
SAMD4B-214ENST00000611159 TNIKQ9UKE5 1360 aa15.25■□□□□ 0.03
SAMD4B-214ENST00000611159 KANK4Q5T7N3 995 aaPredicted RBP15.24■□□□□ 0.03
SAMD4B-214ENST00000611159 RAPGEF2Q9Y4G8 1499 aa15.23■□□□□ 0.03
SAMD4B-214ENST00000611159 PKNOX2Q96KN3 472 aa15.22■□□□□ 0.03
SAMD4B-214ENST00000611159 GOLGA3Q08378 1498 aa15.21■□□□□ 0.03
SAMD4B-214ENST00000611159 HOMEZQ8IX15 550 aa15.21■□□□□ 0.02
SAMD4B-214ENST00000611159 PDIA4P13667 645 aaKnown RBP15.19■□□□□ 0.02
SAMD4B-214ENST00000611159 AMER1Q5JTC6 1135 aaPredicted RBP15.19■□□□□ 0.02
SAMD4B-214ENST00000611159 GRIN2BQ13224 1484 aa15.18■□□□□ 0.02
SAMD4B-214ENST00000611159 SNAPC4Q5SXM2 1469 aa15.18■□□□□ 0.02
SAMD4B-214ENST00000611159 NEUROD1Q13562 356 aa15.18■□□□□ 0.02
SAMD4B-214ENST00000611159 KIF27Q86VH2 1401 aa15.16■□□□□ 0.02
SAMD4B-214ENST00000611159 CHD1O14646 1710 aa15.15■□□□□ 0.02
SAMD4B-214ENST00000611159 TULP1O00294 542 aaPredicted RBP15.14■□□□□ 0.01
SAMD4B-214ENST00000611159 ERICH3Q5RHP9 1530 aa15.13■□□□□ 0.01
SAMD4B-214ENST00000611159 IGF1RP08069 1367 aa15.13■□□□□ 0.01
SAMD4B-214ENST00000611159 FBLN2P98095 1184 aa15.11■□□□□ 0.01
SAMD4B-214ENST00000611159 HIRIP3Q9BW71 556 aaPredicted RBP15.11■□□□□ 0.01
SAMD4B-214ENST00000611159 MAGI1Q96QZ7 1491 aaPredicted RBP15.11■□□□□ 0.01
SAMD4B-214ENST00000611159 ADAMTS12P58397 1594 aa15.1■□□□□ 0.01
SAMD4B-214ENST00000611159 CNGB1Q14028 1251 aaPredicted RBP15.08■□□□□ 0.01
SAMD4B-214ENST00000611159 SYNJ2O15056 1496 aa15.07■□□□□ 0
SAMD4B-214ENST00000611159 CHMP7Q8WUX9 453 aaPredicted RBP15.06■□□□□ 0
SAMD4B-214ENST00000611159 CUL7Q14999 1698 aa15.05■□□□□ -0
SAMD4B-214ENST00000611159 FHAD1B1AJZ9 1412 aa15.04■□□□□ -0
SAMD4B-214ENST00000611159 EEA1Q15075 1411 aa15.03■□□□□ -0
SAMD4B-214ENST00000611159 ZNF316A6NFI3 1004 aaPredicted RBP15.03■□□□□ -0
SAMD4B-214ENST00000611159 ACIN1Q9UKV3 1341 aaKnown RBP15.03■□□□□ -0
SAMD4B-214ENST00000611159 CARMIL1Q5VZK9 1371 aa15.02■□□□□ -0
SAMD4B-214ENST00000611159 GRIN2AQ12879 1464 aa15.02□□□□□ -0.01
SAMD4B-214ENST00000611159 MIER1Q8N108 512 aa15.01□□□□□ -0.01
SAMD4B-214ENST00000611159 OSCARQ8IYS5 282 aa14.99□□□□□ -0.01
SAMD4B-214ENST00000611159 FGD1P98174 961 aa14.98□□□□□ -0.01
SAMD4B-214ENST00000611159 GTF3C3Q9Y5Q9 886 aa14.98□□□□□ -0.01
SAMD4B-214ENST00000611159 CEP170Q5SW79 1584 aa14.98□□□□□ -0.01
SAMD4B-214ENST00000611159 CHIC2Q9UKJ5 165 aa14.98□□□□□ -0.01
SAMD4B-214ENST00000611159 TAOK2Q9UL54 1235 aa14.97□□□□□ -0.01
SAMD4B-214ENST00000611159 PRXQ9BXM0 1461 aa14.97□□□□□ -0.01
SAMD4B-214ENST00000611159 VPS8Q8N3P4 1428 aa14.96□□□□□ -0.01
SAMD4B-214ENST00000611159 PDE4CQ08493 712 aa14.95□□□□□ -0.02
SAMD4B-214ENST00000611159 SIN3AQ96ST3 1273 aa14.94□□□□□ -0.02
SAMD4B-214ENST00000611159 NUP160Q12769 1436 aa14.92□□□□□ -0.02
SAMD4B-214ENST00000611159 CLASP1Q7Z460 1538 aa14.92□□□□□ -0.02
SAMD4B-214ENST00000611159 KIF21BO75037 1637 aa14.88□□□□□ -0.03
SAMD4B-214ENST00000611159 KCNA4P22459 653 aa14.88□□□□□ -0.03
SAMD4B-214ENST00000611159 DNAJC5Q9H3Z4 198 aa14.88□□□□□ -0.03
SAMD4B-214ENST00000611159 CTTNBP2Q8WZ74 1663 aa14.86□□□□□ -0.03
SAMD4B-214ENST00000611159 TRIM52Q96A61 297 aa14.86□□□□□ -0.03
SAMD4B-214ENST00000611159 SAMD1Q6SPF0 538 aaPredicted RBP14.86□□□□□ -0.03
SAMD4B-214ENST00000611159 SALL2Q9Y467 1007 aaPredicted RBP14.86□□□□□ -0.03
SAMD4B-214ENST00000611159 ARAP1Q96P48 1450 aa14.85□□□□□ -0.03
SAMD4B-214ENST00000611159 FHOD3Q2V2M9 1422 aa14.84□□□□□ -0.03
SAMD4B-214ENST00000611159 RRP7BPQ9NSQ0 103 aa14.84□□□□□ -0.03
SAMD4B-214ENST00000611159 POLR3GLQ9BT43 218 aa14.83□□□□□ -0.04
SAMD4B-214ENST00000611159 ERCC6L2Q5T890 1561 aa14.83□□□□□ -0.04
SAMD4B-214ENST00000611159 KIAA0586Q9BVV6 1533 aa14.83□□□□□ -0.04
SAMD4B-214ENST00000611159 SHROOM2Q13796 1616 aa14.82□□□□□ -0.04
SAMD4B-214ENST00000611159 ZNF777Q9ULD5 760 aaPredicted RBP14.82□□□□□ -0.04
SAMD4B-214ENST00000611159 IQGAP2Q13576 1575 aa14.8□□□□□ -0.04
SAMD4B-214ENST00000611159 JPH4Q96JJ6 628 aa14.8□□□□□ -0.04
SAMD4B-214ENST00000611159 RIMBP3CA6NJZ7 1639 aa14.8□□□□□ -0.04
SAMD4B-214ENST00000611159 RIMBP3BA6NNM3 1639 aa14.8□□□□□ -0.04
SAMD4B-214ENST00000611159 RIMBP3Q9UFD9 1639 aa14.8□□□□□ -0.04
SAMD4B-214ENST00000611159 DDX10Q13206 875 aaKnown RBP14.79□□□□□ -0.04
SAMD4B-214ENST00000611159 BCL11BQ9C0K0 894 aaPredicted RBP14.79□□□□□ -0.04
SAMD4B-214ENST00000611159 ARHGEF11O15085 1522 aa14.79□□□□□ -0.04
SAMD4B-214ENST00000611159 TAF7LQ5H9L4 462 aa14.79□□□□□ -0.04
SAMD4B-214ENST00000611159 NPM2Q86SE8 214 aaKnown RBP14.78□□□□□ -0.04
SAMD4B-214ENST00000611159 SENP3-EIF4A1A0A087X0R7 540 aa14.77□□□□□ -0.04
SAMD4B-214ENST00000611159 NEFLP07196 543 aa14.76□□□□□ -0.05
SAMD4B-214ENST00000611159 AAMPQ13685 434 aa14.75□□□□□ -0.05
SAMD4B-214ENST00000611159 BCANQ96GW7 911 aa14.75□□□□□ -0.05
SAMD4B-214ENST00000611159 PRG4Q92954 1404 aaPredicted RBP14.75□□□□□ -0.05
SAMD4B-214ENST00000611159 ZNF326Q5BKZ1 582 aaKnown RBP14.75□□□□□ -0.05
SAMD4B-214ENST00000611159 CHMP4AQ9BY43 222 aa14.75□□□□□ -0.05
SAMD4B-214ENST00000611159 CCNB3Q8WWL7 1395 aa14.75□□□□□ -0.05
SAMD4B-214ENST00000611159 KCNH8Q96L42 1107 aa14.74□□□□□ -0.05
SAMD4B-214ENST00000611159 FOXD1Q16676 465 aa14.74□□□□□ -0.05
SAMD4B-214ENST00000611159 RSPH6AQ9H0K4 717 aa14.74□□□□□ -0.05
SAMD4B-214ENST00000611159 MTUS2Q5JR59 1369 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms