RNA–Protein interactions for RNA: ENST00000610553.1

EWSR1-221, Transcript of EWS RNA binding protein 1, humanhuman

TSL 2

Gene EWSR1, Length 2,300 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EWSR1-221ENST00000610553 CARMIL1Q5VZK9 1371 aa24.7■■□□□ 1.55
EWSR1-221ENST00000610553 FGD5Q6ZNL6 1462 aa24.7■■□□□ 1.54
EWSR1-221ENST00000610553 ITGAEP38570 1179 aa24.69■■□□□ 1.54
EWSR1-221ENST00000610553 CFAP43Q8NDM7 1665 aa24.68■■□□□ 1.54
EWSR1-221ENST00000610553 LAMC3Q9Y6N6 1575 aa24.66■■□□□ 1.54
EWSR1-221ENST00000610553 SETD5Q9C0A6 1442 aa24.65■■□□□ 1.54
EWSR1-221ENST00000610553 PHLDB1Q86UU1 1377 aa24.64■■□□□ 1.54
EWSR1-221ENST00000610553 FHAD1B1AJZ9 1412 aa24.64■■□□□ 1.53
EWSR1-221ENST00000610553 SUPT16HQ9Y5B9 1047 aaKnown RBP24.62■■□□□ 1.53
EWSR1-221ENST00000610553 PCF11O94913 1555 aaKnown RBP24.62■■□□□ 1.53
EWSR1-221ENST00000610553 DNMBPQ6XZF7 1577 aa24.56■■□□□ 1.52
EWSR1-221ENST00000610553 TOPBP1Q92547 1522 aa24.54■■□□□ 1.52
EWSR1-221ENST00000610553 WDR97A6NE52 1622 aa24.53■■□□□ 1.52
EWSR1-221ENST00000610553 FYCO1Q9BQS8 1478 aa24.5■■□□□ 1.51
EWSR1-221ENST00000610553 KIF21AQ7Z4S6 1674 aa24.49■■□□□ 1.51
EWSR1-221ENST00000610553 POLA1P09884 1462 aaPredicted RBP24.49■■□□□ 1.51
EWSR1-221ENST00000610553 EFCAB5A4FU69 1503 aa24.49■■□□□ 1.51
EWSR1-221ENST00000610553 URB2Q14146 1524 aaKnown RBP24.48■■□□□ 1.51
EWSR1-221ENST00000610553 RAD54L2Q9Y4B4 1467 aa24.48■■□□□ 1.51
EWSR1-221ENST00000610553 PDS5BQ9NTI5 1447 aa24.47■■□□□ 1.51
EWSR1-221ENST00000610553 FAM50AQ14320 339 aaKnown RBP24.46■■□□□ 1.51
EWSR1-221ENST00000610553 ABCA10Q8WWZ4 1543 aa24.45■■□□□ 1.5
EWSR1-221ENST00000610553 AQRO60306 1485 aaKnown RBP eCLIP24.45■■□□□ 1.52e-8■■■□□ 15.2
EWSR1-221ENST00000610553 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.45■■□□□ 1.5
EWSR1-221ENST00000610553 FHOD3Q2V2M9 1422 aa24.44■■□□□ 1.5
EWSR1-221ENST00000610553 CASKIN1Q8WXD9 1431 aa24.43■■□□□ 1.5
EWSR1-221ENST00000610553 KCNH8Q96L42 1107 aa24.43■■□□□ 1.5
EWSR1-221ENST00000610553 TIMELESSQ9UNS1 1208 aa24.43■■□□□ 1.5
EWSR1-221ENST00000610553 SIN3AQ96ST3 1273 aa24.42■■□□□ 1.5
EWSR1-221ENST00000610553 CUL7Q14999 1698 aa24.4■■□□□ 1.5
EWSR1-221ENST00000610553 CTTNBP2Q8WZ74 1663 aa24.4■■□□□ 1.5
EWSR1-221ENST00000610553 P3H3Q8IVL6 736 aa24.39■■□□□ 1.49
EWSR1-221ENST00000610553 PPP1R15AO75807 674 aaPredicted RBP24.33■■□□□ 1.48
EWSR1-221ENST00000610553 DDX10Q13206 875 aaKnown RBP24.32■■□□□ 1.48
EWSR1-221ENST00000610553 SNAPC4Q5SXM2 1469 aa24.31■■□□□ 1.48
EWSR1-221ENST00000610553 FGD6Q6ZV73 1430 aa24.31■■□□□ 1.48
EWSR1-221ENST00000610553 ATP1B4Q9UN42 357 aaPredicted RBP24.3■■□□□ 1.48
EWSR1-221ENST00000610553 FMN1Q68DA7 1419 aa24.3■■□□□ 1.48
EWSR1-221ENST00000610553 TSHZ2Q9NRE2 1034 aa24.26■■□□□ 1.47
EWSR1-221ENST00000610553 CCDC18Q5T9S5 1454 aa24.24■■□□□ 1.47
EWSR1-221ENST00000610553 HFM1A2PYH4 1435 aa24.23■■□□□ 1.47
EWSR1-221ENST00000610553 SAMD9Q5K651 1589 aa24.23■■□□□ 1.47
EWSR1-221ENST00000610553 TDRD9Q8NDG6 1382 aaKnown RBP24.21■■□□□ 1.47
EWSR1-221ENST00000610553 PTPN23Q9H3S7 1636 aa24.21■■□□□ 1.47
EWSR1-221ENST00000610553 LRRIQ1Q96JM4 1722 aa24.21■■□□□ 1.47
EWSR1-221ENST00000610553 UACAQ9BZF9 1416 aa24.2■■□□□ 1.46
EWSR1-221ENST00000610553 CCER2I3L3R5 266 aa24.19■■□□□ 1.46
EWSR1-221ENST00000610553 PTPRKQ15262 1439 aa24.18■■□□□ 1.46
EWSR1-221ENST00000610553 MRC2Q9UBG0 1479 aa24.17■■□□□ 1.46
EWSR1-221ENST00000610553 MTUS2Q5JR59 1369 aa24.17■■□□□ 1.46
EWSR1-221ENST00000610553 THOC2Q8NI27 1593 aaKnown RBP24.16■■□□□ 1.46
EWSR1-221ENST00000610553 ABCA5Q8WWZ7 1642 aa24.16■■□□□ 1.46
EWSR1-221ENST00000610553 TONSLQ96HA7 1378 aa24.15■■□□□ 1.46
EWSR1-221ENST00000610553 TARBP1Q13395 1621 aaKnown RBP24.14■■□□□ 1.46
EWSR1-221ENST00000610553 HIRIP3Q9BW71 556 aaPredicted RBP24.14■■□□□ 1.45
EWSR1-221ENST00000610553 GRIN2BQ13224 1484 aa24.14■■□□□ 1.45
EWSR1-221ENST00000610553 NCOA2Q15596 1464 aa24.13■■□□□ 1.45
EWSR1-221ENST00000610553 MYOM3Q5VTT5 1437 aa24.13■■□□□ 1.45
EWSR1-221ENST00000610553 NAIPQ13075 1403 aa24.12■■□□□ 1.45
EWSR1-221ENST00000610553 ANP32CO43423 234 aa24.11■■□□□ 1.45
EWSR1-221ENST00000610553 GAPVD1Q14C86 1478 aa24.1■■□□□ 1.45
EWSR1-221ENST00000610553 SUPT6HQ7KZ85 1726 aaKnown RBP24.1■■□□□ 1.45
EWSR1-221ENST00000610553 EHBP1L1Q8N3D4 1523 aa24.1■■□□□ 1.45
EWSR1-221ENST00000610553 FKBP8Q14318 412 aa24.09■■□□□ 1.45
EWSR1-221ENST00000610553 KDM5BQ9UGL1 1544 aa24.08■■□□□ 1.45
EWSR1-221ENST00000610553 ARHGEF11O15085 1522 aa24.05■■□□□ 1.44
EWSR1-221ENST00000610553 ERCC6Q03468 1493 aa24.05■■□□□ 1.44
EWSR1-221ENST00000610553 BCANQ96GW7 911 aa24.05■■□□□ 1.44
EWSR1-221ENST00000610553 UGGT2Q9NYU1 1516 aa24.04■■□□□ 1.44
EWSR1-221ENST00000610553 WDR62O43379 1518 aa24.03■■□□□ 1.44
EWSR1-221ENST00000610553 TRIM52Q96A61 297 aa24■■□□□ 1.43
EWSR1-221ENST00000610553 MAGI3Q5TCQ9 1506 aa23.99■■□□□ 1.43
EWSR1-221ENST00000610553 GCC2Q8IWJ2 1684 aa23.98■■□□□ 1.43
EWSR1-221ENST00000610553 NEFLP07196 543 aa23.97■■□□□ 1.43
EWSR1-221ENST00000610553 TCOF1Q13428 1488 aaKnown RBP23.96■■□□□ 1.43
EWSR1-221ENST00000610553 HECW1Q76N89 1606 aa23.96■■□□□ 1.43
EWSR1-221ENST00000610553 PBRM1Q86U86 1689 aa23.96■■□□□ 1.43
EWSR1-221ENST00000610553 ZNF608Q9ULD9 1512 aaPredicted RBP23.95■■□□□ 1.42
EWSR1-221ENST00000610553 AKNAQ7Z591 1439 aa23.92■■□□□ 1.42
EWSR1-221ENST00000610553 DENND4BO75064 1496 aaPredicted RBP23.92■■□□□ 1.42
EWSR1-221ENST00000610553 ANP32EQ9BTT0 268 aa23.9■■□□□ 1.42
EWSR1-221ENST00000610553 IFT140Q96RY7 1462 aa23.89■■□□□ 1.42
EWSR1-221ENST00000610553 KDM6BO15054 1643 aa23.84■■□□□ 1.41
EWSR1-221ENST00000610553 ADAMTS12P58397 1594 aa23.83■■□□□ 1.41
EWSR1-221ENST00000610553 RRP7BPQ9NSQ0 103 aa23.82■■□□□ 1.4
EWSR1-221ENST00000610553 EPRSP07814 1512 aaKnown RBP23.82■■□□□ 1.4
EWSR1-221ENST00000610553 WASHC2AQ641Q2 1341 aa23.81■■□□□ 1.4
EWSR1-221ENST00000610553 EIF4G3O43432 1585 aaKnown RBP23.81■■□□□ 1.4
EWSR1-221ENST00000610553 MIA2Q96PC5 1412 aa23.81■■□□□ 1.4
EWSR1-221ENST00000610553 IQGAP2Q13576 1575 aa23.8■■□□□ 1.4
EWSR1-221ENST00000610553 HSPA5P11021 654 aaKnown RBP23.79■■□□□ 1.4
EWSR1-221ENST00000610553 CHIC2Q9UKJ5 165 aa23.77■■□□□ 1.4
EWSR1-221ENST00000610553 RBM19Q9Y4C8 960 aaKnown RBP23.77■■□□□ 1.4
EWSR1-221ENST00000610553 CDK13Q14004 1512 aaKnown RBP23.75■■□□□ 1.39
EWSR1-221ENST00000610553 HNRNPUQ00839 825 aaKnown RBP eCLIP23.74■■□□□ 1.39
EWSR1-221ENST00000610553 CNTLNQ9NXG0 1405 aa23.73■■□□□ 1.39
EWSR1-221ENST00000610553 EIF4G2P78344 907 aaKnown RBP eCLIP23.72■■□□□ 1.39
EWSR1-221ENST00000610553 MPHOSPH9Q99550 1183 aa23.71■■□□□ 1.39
EWSR1-221ENST00000610553 NCOA1Q15788 1441 aa23.68■■□□□ 1.38
EWSR1-221ENST00000610553 ROCK1Q13464 1354 aa23.66■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms