RNA–Protein interactions for RNA: ENST00000601869.1

STRN4-222, Transcript of striatin 4, humanhuman

Gene STRN4, Length 2,240 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRN4-222ENST00000601869 TIMELESSQ9UNS1 1208 aa27.65■■■□□ 2.02
STRN4-222ENST00000601869 RAB3GAP2Q9H2M9 1393 aa27.65■■■□□ 2.02
STRN4-222ENST00000601869 KCNH8Q96L42 1107 aa27.63■■■□□ 2.01
STRN4-222ENST00000601869 BCANQ96GW7 911 aa27.61■■■□□ 2.01
STRN4-222ENST00000601869 FGD5Q6ZNL6 1462 aa27.61■■■□□ 2.01
STRN4-222ENST00000601869 RANGAP1P46060 587 aaPredicted RBP27.6■■■□□ 2.01
STRN4-222ENST00000601869 WDR97A6NE52 1622 aa27.58■■■□□ 2.01
STRN4-222ENST00000601869 ARHGAP35Q9NRY4 1499 aa27.58■■■□□ 2
STRN4-222ENST00000601869 SETD5Q9C0A6 1442 aa27.57■■■□□ 2
STRN4-222ENST00000601869 NESP48681 1621 aa27.56■■■□□ 2
STRN4-222ENST00000601869 TIAM1Q13009 1591 aa27.55■■■□□ 2
STRN4-222ENST00000601869 PPP1R15AO75807 674 aaPredicted RBP27.55■■■□□ 2
STRN4-222ENST00000601869 DNMBPQ6XZF7 1577 aa27.49■■□□□ 1.99
STRN4-222ENST00000601869 DDX10Q13206 875 aaKnown RBP27.48■■□□□ 1.99
STRN4-222ENST00000601869 IGF1RP08069 1367 aa27.48■■□□□ 1.99
STRN4-222ENST00000601869 FANCIQ9NVI1 1328 aa27.47■■□□□ 1.99
STRN4-222ENST00000601869 LAMC3Q9Y6N6 1575 aa27.47■■□□□ 1.99
STRN4-222ENST00000601869 ANP32CO43423 234 aa27.43■■□□□ 1.98
STRN4-222ENST00000601869 TOPBP1Q92547 1522 aa27.43■■□□□ 1.98
STRN4-222ENST00000601869 MYT1LQ9UL68 1186 aa27.41■■□□□ 1.98
STRN4-222ENST00000601869 CFAP43Q8NDM7 1665 aa27.4■■□□□ 1.98
STRN4-222ENST00000601869 LRRC9Q6ZRR7 1453 aa27.38■■□□□ 1.97
STRN4-222ENST00000601869 POLA1P09884 1462 aaPredicted RBP27.37■■□□□ 1.97
STRN4-222ENST00000601869 CARMIL1Q5VZK9 1371 aa27.35■■□□□ 1.97
STRN4-222ENST00000601869 DNAJC5BQ9UF47 199 aa27.35■■□□□ 1.97
STRN4-222ENST00000601869 RAD54L2Q9Y4B4 1467 aa27.34■■□□□ 1.97
STRN4-222ENST00000601869 ITGAEP38570 1179 aa27.33■■□□□ 1.97
STRN4-222ENST00000601869 ABCA10Q8WWZ4 1543 aa27.33■■□□□ 1.97
STRN4-222ENST00000601869 ERICH6BQ5W0A0 696 aa27.31■■□□□ 1.96
STRN4-222ENST00000601869 MSH5O43196 834 aa27.29■■□□□ 1.96
STRN4-222ENST00000601869 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.29■■□□□ 1.964e-6■□□□□ 8.2
STRN4-222ENST00000601869 URB2Q14146 1524 aaKnown RBP27.28■■□□□ 1.96
STRN4-222ENST00000601869 PDS5BQ9NTI5 1447 aa27.27■■□□□ 1.96
STRN4-222ENST00000601869 TRIM52Q96A61 297 aa27.26■■□□□ 1.95
STRN4-222ENST00000601869 CDK11AQ9UQ88 783 aaPredicted RBP27.25■■□□□ 1.95
STRN4-222ENST00000601869 FHAD1B1AJZ9 1412 aa27.25■■□□□ 1.95
STRN4-222ENST00000601869 PHLDB1Q86UU1 1377 aa27.23■■□□□ 1.95
STRN4-222ENST00000601869 SIN3AQ96ST3 1273 aa27.22■■□□□ 1.95
STRN4-222ENST00000601869 ERICH6Q7L0X2 663 aa27.22■■□□□ 1.95
STRN4-222ENST00000601869 KIF21AQ7Z4S6 1674 aa27.16■■□□□ 1.94
STRN4-222ENST00000601869 CUL7Q14999 1698 aa27.12■■□□□ 1.93
STRN4-222ENST00000601869 PCF11O94913 1555 aaKnown RBP27.11■■□□□ 1.93
STRN4-222ENST00000601869 TONSLQ96HA7 1378 aa27.11■■□□□ 1.93
STRN4-222ENST00000601869 FAM50AQ14320 339 aaKnown RBP27.06■■□□□ 1.92
STRN4-222ENST00000601869 FYCO1Q9BQS8 1478 aa27.06■■□□□ 1.92
STRN4-222ENST00000601869 ABCA5Q8WWZ7 1642 aa27.05■■□□□ 1.92
STRN4-222ENST00000601869 AQRO60306 1485 aaKnown RBP eCLIP27.04■■□□□ 1.922e-8■■■■■ 39.5
STRN4-222ENST00000601869 PPP4R2Q9NY27 417 aa27.03■■□□□ 1.92
STRN4-222ENST00000601869 UACAQ9BZF9 1416 aa27.02■■□□□ 1.92
STRN4-222ENST00000601869 TDRD9Q8NDG6 1382 aaKnown RBP27.01■■□□□ 1.92
STRN4-222ENST00000601869 EFCAB5A4FU69 1503 aa27.01■■□□□ 1.91
STRN4-222ENST00000601869 CCDC18Q5T9S5 1454 aa27■■□□□ 1.91
STRN4-222ENST00000601869 HNRNPUQ00839 825 aaKnown RBP eCLIP27■■□□□ 1.91
STRN4-222ENST00000601869 GAPVD1Q14C86 1478 aa26.99■■□□□ 1.91
STRN4-222ENST00000601869 HFM1A2PYH4 1435 aa26.96■■□□□ 1.91
STRN4-222ENST00000601869 HIRIP3Q9BW71 556 aaPredicted RBP26.96■■□□□ 1.91
STRN4-222ENST00000601869 PTPN23Q9H3S7 1636 aa26.95■■□□□ 1.91
STRN4-222ENST00000601869 CTTNBP2Q8WZ74 1663 aa26.95■■□□□ 1.91
STRN4-222ENST00000601869 TARBP1Q13395 1621 aaKnown RBP26.94■■□□□ 1.9
STRN4-222ENST00000601869 CASKIN1Q8WXD9 1431 aa26.94■■□□□ 1.9
STRN4-222ENST00000601869 KDM5BQ9UGL1 1544 aa26.93■■□□□ 1.9
STRN4-222ENST00000601869 NCOA2Q15596 1464 aa26.93■■□□□ 1.9
STRN4-222ENST00000601869 FGD6Q6ZV73 1430 aa26.91■■□□□ 1.9
STRN4-222ENST00000601869 MRC2Q9UBG0 1479 aa26.88■■□□□ 1.89
STRN4-222ENST00000601869 P3H3Q8IVL6 736 aa26.88■■□□□ 1.89
STRN4-222ENST00000601869 FHOD3Q2V2M9 1422 aa26.86■■□□□ 1.89
STRN4-222ENST00000601869 DEKP35659 375 aaKnown RBP26.84■■□□□ 1.89
STRN4-222ENST00000601869 CNTLNQ9NXG0 1405 aa26.83■■□□□ 1.89
STRN4-222ENST00000601869 IRX6P78412 446 aaPredicted RBP26.8■■□□□ 1.88
STRN4-222ENST00000601869 HECW1Q76N89 1606 aa26.78■■□□□ 1.88
STRN4-222ENST00000601869 ZBED9Q6R2W3 1325 aa26.78■■□□□ 1.88
STRN4-222ENST00000601869 NAIPQ13075 1403 aa26.76■■□□□ 1.87
STRN4-222ENST00000601869 PBRM1Q86U86 1689 aa26.76■■□□□ 1.87
STRN4-222ENST00000601869 NOP58Q9Y2X3 529 aaKnown RBP26.75■■□□□ 1.87
STRN4-222ENST00000601869 FMN1Q68DA7 1419 aa26.75■■□□□ 1.87
STRN4-222ENST00000601869 WASHC2AQ641Q2 1341 aa26.74■■□□□ 1.87
STRN4-222ENST00000601869 GCC2Q8IWJ2 1684 aa26.73■■□□□ 1.87
STRN4-222ENST00000601869 POLR1AO95602 1720 aaPredicted RBP26.73■■□□□ 1.87
STRN4-222ENST00000601869 SAMD9Q5K651 1589 aa26.72■■□□□ 1.87
STRN4-222ENST00000601869 THOC2Q8NI27 1593 aaKnown RBP26.72■■□□□ 1.87
STRN4-222ENST00000601869 WDR62O43379 1518 aa26.7■■□□□ 1.87
STRN4-222ENST00000601869 ATP1B4Q9UN42 357 aaPredicted RBP26.7■■□□□ 1.86
STRN4-222ENST00000601869 SNAPC4Q5SXM2 1469 aa26.69■■□□□ 1.86
STRN4-222ENST00000601869 PTPRKQ15262 1439 aa26.69■■□□□ 1.86
STRN4-222ENST00000601869 SUPT6HQ7KZ85 1726 aaKnown RBP26.68■■□□□ 1.86
STRN4-222ENST00000601869 HSPA5P11021 654 aaKnown RBP26.67■■□□□ 1.86
STRN4-222ENST00000601869 MYOM3Q5VTT5 1437 aa26.66■■□□□ 1.86
STRN4-222ENST00000601869 EIF4G2P78344 907 aaKnown RBP eCLIP26.66■■□□□ 1.86
STRN4-222ENST00000601869 NCOA1Q15788 1441 aa26.66■■□□□ 1.86
STRN4-222ENST00000601869 ADAMTS12P58397 1594 aa26.65■■□□□ 1.86
STRN4-222ENST00000601869 IFT140Q96RY7 1462 aa26.65■■□□□ 1.86
STRN4-222ENST00000601869 AKNAQ7Z591 1439 aa26.65■■□□□ 1.86
STRN4-222ENST00000601869 GRIN2BQ13224 1484 aa26.64■■□□□ 1.86
STRN4-222ENST00000601869 EHBP1L1Q8N3D4 1523 aa26.62■■□□□ 1.85
STRN4-222ENST00000601869 PRKRIP1Q9H875 184 aaPredicted RBP26.62■■□□□ 1.85
STRN4-222ENST00000601869 MTUS2Q5JR59 1369 aa26.62■■□□□ 1.85
STRN4-222ENST00000601869 B4GALNT3Q6L9W6 998 aa26.6■■□□□ 1.85
STRN4-222ENST00000601869 ZNF608Q9ULD9 1512 aaPredicted RBP26.59■■□□□ 1.85
STRN4-222ENST00000601869 SMG6Q86US8 1419 aaKnown RBP26.59■■□□□ 1.85
STRN4-222ENST00000601869 CCDC7Q96M83 1385 aa26.59■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms