RNA–Protein interactions for RNA: ENST00000601858.1

ZNF563-204, Transcript of zinc finger protein 563, humanhuman

TSL 5

Gene ZNF563, Length 564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF563-204ENST00000601858 PROM2Q8N271 834 aa11.85□□□□□ -0.51
ZNF563-204ENST00000601858 CUX2O14529 1486 aa11.84□□□□□ -0.51
ZNF563-204ENST00000601858 ZNF692Q9BU19 519 aaPredicted RBP11.84□□□□□ -0.51
ZNF563-204ENST00000601858 CEP164Q9UPV0 1460 aa11.83□□□□□ -0.52
ZNF563-204ENST00000601858 SSUH2Q9Y2M2 353 aa11.81□□□□□ -0.52
ZNF563-204ENST00000601858 MRC2Q9UBG0 1479 aa11.81□□□□□ -0.52
ZNF563-204ENST00000601858 REM2Q8IYK8 340 aaPredicted RBP11.8□□□□□ -0.52
ZNF563-204ENST00000601858 PIP4P2Q8N4L2 257 aa11.8□□□□□ -0.52
ZNF563-204ENST00000601858 KIF21AQ7Z4S6 1674 aa11.8□□□□□ -0.52
ZNF563-204ENST00000601858 THOC2Q8NI27 1593 aaKnown RBP11.79□□□□□ -0.52
ZNF563-204ENST00000601858 PRDM2Q13029 1718 aa11.77□□□□□ -0.53
ZNF563-204ENST00000601858 WDR62O43379 1518 aa11.76□□□□□ -0.53
ZNF563-204ENST00000601858 HAX1O00165 279 aa11.73□□□□□ -0.53
ZNF563-204ENST00000601858 ABCC8Q09428 1581 aa11.71□□□□□ -0.54
ZNF563-204ENST00000601858 URB2Q14146 1524 aaKnown RBP11.7□□□□□ -0.54
ZNF563-204ENST00000601858 FXR2P51116 673 aaKnown RBP eCLIP11.68□□□□□ -0.54
ZNF563-204ENST00000601858 PITPNM1O00562 1244 aa11.66□□□□□ -0.54
ZNF563-204ENST00000601858 FBXO3Q9UK99 471 aa11.66□□□□□ -0.54
ZNF563-204ENST00000601858 TOPBP1Q92547 1522 aa11.65□□□□□ -0.54
ZNF563-204ENST00000601858 DNMBPQ6XZF7 1577 aa11.64□□□□□ -0.55
ZNF563-204ENST00000601858 IFT140Q96RY7 1462 aa11.6□□□□□ -0.55
ZNF563-204ENST00000601858 CUX1P39880 1505 aa11.57□□□□□ -0.56
ZNF563-204ENST00000601858 POLA1P09884 1462 aaPredicted RBP11.57□□□□□ -0.56
ZNF563-204ENST00000601858 DNAJC5Q9H3Z4 198 aa11.56□□□□□ -0.56
ZNF563-204ENST00000601858 WRNQ14191 1432 aaPredicted RBP eCLIP11.55□□□□□ -0.56
ZNF563-204ENST00000601858 FGD5Q6ZNL6 1462 aa11.53□□□□□ -0.56
ZNF563-204ENST00000601858 EVX2Q03828 476 aa11.53□□□□□ -0.56
ZNF563-204ENST00000601858 STAG3Q9UJ98 1225 aa11.53□□□□□ -0.56
ZNF563-204ENST00000601858 SOGA1O94964 1423 aa11.52□□□□□ -0.56
ZNF563-204ENST00000601858 VASPP50552 380 aaPredicted RBP11.5□□□□□ -0.57
ZNF563-204ENST00000601858 TOP2BQ02880 1626 aa11.49□□□□□ -0.57
ZNF563-204ENST00000601858 TARBP1Q13395 1621 aaKnown RBP11.49□□□□□ -0.57
ZNF563-204ENST00000601858 RAD54L2Q9Y4B4 1467 aa11.49□□□□□ -0.57
ZNF563-204ENST00000601858 SPDYE1Q8NFV5 336 aaPredicted RBP11.48□□□□□ -0.57
ZNF563-204ENST00000601858 ZNF608Q9ULD9 1512 aaPredicted RBP11.48□□□□□ -0.57
ZNF563-204ENST00000601858 WDR97A6NE52 1622 aa11.47□□□□□ -0.57
ZNF563-204ENST00000601858 BIVM-ERCC5R4GMW8 1640 aa11.47□□□□□ -0.57
ZNF563-204ENST00000601858 SYNJ1O43426 1573 aa11.46□□□□□ -0.57
ZNF563-204ENST00000601858 ABCA10Q8WWZ4 1543 aa11.45□□□□□ -0.58
ZNF563-204ENST00000601858 AQRO60306 1485 aaKnown RBP eCLIP11.44□□□□□ -0.58
ZNF563-204ENST00000601858 TDRD9Q8NDG6 1382 aaKnown RBP11.43□□□□□ -0.58
ZNF563-204ENST00000601858 EIF4G3O43432 1585 aaKnown RBP11.43□□□□□ -0.58
ZNF563-204ENST00000601858 GRIN2BQ13224 1484 aa11.4□□□□□ -0.58
ZNF563-204ENST00000601858 CLEC11AQ9Y240 323 aa11.4□□□□□ -0.58
ZNF563-204ENST00000601858 GAPVD1Q14C86 1478 aa11.39□□□□□ -0.59
ZNF563-204ENST00000601858 MAGI1Q96QZ7 1491 aaPredicted RBP11.37□□□□□ -0.59
ZNF563-204ENST00000601858 ABCA5Q8WWZ7 1642 aa11.36□□□□□ -0.59
ZNF563-204ENST00000601858 PRKAR2AP13861 404 aaKnown RBP11.36□□□□□ -0.59
ZNF563-204ENST00000601858 IFNLR1Q8IU57 520 aaPredicted RBP11.36□□□□□ -0.59
ZNF563-204ENST00000601858 SNAPC4Q5SXM2 1469 aa11.35□□□□□ -0.59
ZNF563-204ENST00000601858 PRR29P0C7W0 189 aa11.34□□□□□ -0.59
ZNF563-204ENST00000601858 MIER1Q8N108 512 aa11.34□□□□□ -0.59
ZNF563-204ENST00000601858 PLCD3Q8N3E9 789 aa11.34□□□□□ -0.59
ZNF563-204ENST00000601858 C19orf67A6NJJ6 358 aa11.33□□□□□ -0.6
ZNF563-204ENST00000601858 KIF27Q86VH2 1401 aa11.33□□□□□ -0.6
ZNF563-204ENST00000601858 ERICH3Q5RHP9 1530 aa11.32□□□□□ -0.6
ZNF563-204ENST00000601858 TRIM41Q8WV44 630 aa11.32□□□□□ -0.6
ZNF563-204ENST00000601858 SYNJ2O15056 1496 aa11.32□□□□□ -0.6
ZNF563-204ENST00000601858 CHMP7Q8WUX9 453 aaPredicted RBP11.31□□□□□ -0.6
ZNF563-204ENST00000601858 PBRM1Q86U86 1689 aa11.3□□□□□ -0.6
ZNF563-204ENST00000601858 AMER1Q5JTC6 1135 aaPredicted RBP11.29□□□□□ -0.6
ZNF563-204ENST00000601858 FHAD1B1AJZ9 1412 aa11.28□□□□□ -0.6
ZNF563-204ENST00000601858 GABBR2O75899 941 aa11.27□□□□□ -0.61
ZNF563-204ENST00000601858 RTN4Q9NQC3 1192 aaKnown RBP11.27□□□□□ -0.61
ZNF563-204ENST00000601858 ADAMTS12P58397 1594 aa11.26□□□□□ -0.61
ZNF563-204ENST00000601858 PLEKHG5O94827 1062 aa11.26□□□□□ -0.61
ZNF563-204ENST00000601858 LHX8Q68G74 356 aa11.26□□□□□ -0.61
ZNF563-204ENST00000601858 IGF1RP08069 1367 aa11.26□□□□□ -0.61
ZNF563-204ENST00000601858 KLHL34Q8N239 644 aa11.25□□□□□ -0.61
ZNF563-204ENST00000601858 CHD1O14646 1710 aa11.24□□□□□ -0.61
ZNF563-204ENST00000601858 CREBZFQ9NS37 354 aa11.24□□□□□ -0.61
ZNF563-204ENST00000601858 GRIN2AQ12879 1464 aa11.24□□□□□ -0.61
ZNF563-204ENST00000601858 ZBTB47Q9UFB7 747 aaPredicted RBP11.21□□□□□ -0.61
ZNF563-204ENST00000601858 NUP160Q12769 1436 aa11.2□□□□□ -0.62
ZNF563-204ENST00000601858 CARMIL1Q5VZK9 1371 aa11.2□□□□□ -0.62
ZNF563-204ENST00000601858 CUL7Q14999 1698 aa11.2□□□□□ -0.62
ZNF563-204ENST00000601858 SPOCK2Q92563 424 aa11.19□□□□□ -0.62
ZNF563-204ENST00000601858 CLASP1Q7Z460 1538 aa11.18□□□□□ -0.62
ZNF563-204ENST00000601858 EEA1Q15075 1411 aa11.18□□□□□ -0.62
ZNF563-204ENST00000601858 RUSC2Q8N2Y8 1516 aa11.15□□□□□ -0.62
ZNF563-204ENST00000601858 MNX1P50219 401 aaPredicted RBP11.15□□□□□ -0.62
ZNF563-204ENST00000601858 RIMBP3CA6NJZ7 1639 aa11.15□□□□□ -0.62
ZNF563-204ENST00000601858 RIMBP3BA6NNM3 1639 aa11.15□□□□□ -0.62
ZNF563-204ENST00000601858 RIMBP3Q9UFD9 1639 aa11.15□□□□□ -0.62
ZNF563-204ENST00000601858 CEP170Q5SW79 1584 aa11.14□□□□□ -0.63
ZNF563-204ENST00000601858 ARHGEF11O15085 1522 aa11.14□□□□□ -0.63
ZNF563-204ENST00000601858 RAPGEF2Q9Y4G8 1499 aa11.13□□□□□ -0.63
ZNF563-204ENST00000601858 CHADLQ6NUI6 762 aa11.12□□□□□ -0.63
ZNF563-204ENST00000601858 KIAA0586Q9BVV6 1533 aa11.11□□□□□ -0.63
ZNF563-204ENST00000601858 PRXQ9BXM0 1461 aa11.11□□□□□ -0.63
ZNF563-204ENST00000601858 JPH4Q96JJ6 628 aa11.08□□□□□ -0.64
ZNF563-204ENST00000601858 SHROOM2Q13796 1616 aa11.06□□□□□ -0.64
ZNF563-204ENST00000601858 NUBP1P53384 320 aa11.06□□□□□ -0.64
ZNF563-204ENST00000601858 PRG4Q92954 1404 aaPredicted RBP11.05□□□□□ -0.64
ZNF563-204ENST00000601858 FARP1Q9Y4F1 1045 aaPredicted RBP11.05□□□□□ -0.64
ZNF563-204ENST00000601858 ARAP1Q96P48 1450 aa11.05□□□□□ -0.64
ZNF563-204ENST00000601858 NPM1P06748 294 aaKnown RBP eCLIP11.04□□□□□ -0.64
ZNF563-204ENST00000601858 PKD2Q13563 968 aa11.04□□□□□ -0.64
ZNF563-204ENST00000601858 CYB5RLQ6IPT4 315 aa11.03□□□□□ -0.64
ZNF563-204ENST00000601858 FAM9AQ8IZU1 332 aaPredicted RBP11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms